RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 RNASE8Q8TDE3 154 aaKnown RBP12.31□□□□□ -0.44
CLN6-218ENST00000637223 TMEM263Q8WUH6 116 aaKnown RBP12.31□□□□□ -0.44
CLN6-218ENST00000637223 LINC00467Q9BRT7 94 aa12.31□□□□□ -0.44
CLN6-218ENST00000637223 TP53TG3Q9ULZ0 132 aa12.31□□□□□ -0.44
CLN6-218ENST00000637223 TRBV6-1A0A0K0K1D8 114 aa12.3□□□□□ -0.44
CLN6-218ENST00000637223 SPART-AS1P0CW21 52 aa12.3□□□□□ -0.44
CLN6-218ENST00000637223 ZNF493Q6ZR52 646 aa12.3□□□□□ -0.44
CLN6-218ENST00000637223 DKK2Q9UBU2 259 aa12.3□□□□□ -0.44
CLN6-218ENST00000637223 LTAP01374 205 aa12.29□□□□□ -0.44
CLN6-218ENST00000637223 ADCYAP1P18509 176 aa12.29□□□□□ -0.44
CLN6-218ENST00000637223 NHLRC2Q8NBF2 726 aa12.29□□□□□ -0.44
CLN6-218ENST00000637223 DERL1Q9BUN8 251 aa12.29□□□□□ -0.44
CLN6-218ENST00000637223 ZFP30Q9Y2G7 519 aa12.29□□□□□ -0.44
CLN6-218ENST00000637223 SNAPINO95295 136 aa12.28□□□□□ -0.44
CLN6-218ENST00000637223 APOC3P02656 99 aa12.28□□□□□ -0.44
CLN6-218ENST00000637223 S100A9P06702 114 aaKnown RBP12.28□□□□□ -0.44
CLN6-218ENST00000637223 RPL35P42766 123 aaKnown RBP12.28□□□□□ -0.44
CLN6-218ENST00000637223 PNRC1Q12796 327 aaPredicted RBP12.28□□□□□ -0.44
CLN6-218ENST00000637223 C12orf74Q32Q52 190 aa12.28□□□□□ -0.44
CLN6-218ENST00000637223 ANXA2RQ3ZCQ2 193 aa12.28□□□□□ -0.44
CLN6-218ENST00000637223 FAM159AQ6UWV7 190 aa12.28□□□□□ -0.44
CLN6-218ENST00000637223 ZC2HC1AQ96GY0 325 aa12.28□□□□□ -0.44
CLN6-218ENST00000637223 GSN-AS1Q9NRJ2 163 aa12.28□□□□□ -0.44
CLN6-218ENST00000637223 SNURFLB1AK76 121 aa12.27□□□□□ -0.45
CLN6-218ENST00000637223 PFN1P07737 140 aaKnown RBP12.27□□□□□ -0.45
CLN6-218ENST00000637223 Q6ZTC4 211 aa12.27□□□□□ -0.45
CLN6-218ENST00000637223 BAGE2Q86Y30 109 aa12.27□□□□□ -0.45
CLN6-218ENST00000637223 NOP10Q9NPE3 64 aaKnown RBP12.27□□□□□ -0.45
CLN6-218ENST00000637223 C11orf21Q9P2W6 132 aa12.27□□□□□ -0.45
CLN6-218ENST00000637223 TIMM8BQ9Y5J9 83 aaPredicted RBP12.27□□□□□ -0.45
CLN6-218ENST00000637223 TEX48A0A1B0GUV7 120 aa12.26□□□□□ -0.45
CLN6-218ENST00000637223 TMEM183AQ8IXX5 376 aa12.26□□□□□ -0.45
CLN6-218ENST00000637223 C11orf72Q8NBR9 251 aa12.26□□□□□ -0.45
CLN6-218ENST00000637223 DNAH1Q9P2D7 4330 aa12.25□□□□□ -0.45
CLN6-218ENST00000637223 LYRM9A8MSI8 78 aa12.25□□□□□ -0.45
CLN6-218ENST00000637223 ZNF727A8MUV8 499 aa12.25□□□□□ -0.45
CLN6-218ENST00000637223 B4DEV8 164 aa12.25□□□□□ -0.45
CLN6-218ENST00000637223 GNRH2O43555 120 aa12.25□□□□□ -0.45
CLN6-218ENST00000637223 DEFB130BP0DP73 79 aa12.25□□□□□ -0.45
CLN6-218ENST00000637223 DEFB130AP0DP74 79 aa12.25□□□□□ -0.45
CLN6-218ENST00000637223 CRIP1P50238 77 aa12.25□□□□□ -0.45
CLN6-218ENST00000637223 COX8CQ7Z4L0 72 aa12.25□□□□□ -0.45
CLN6-218ENST00000637223 PHLDA1Q8WV24 401 aaPredicted RBP12.25□□□□□ -0.45
CLN6-218ENST00000637223 NAT8Q9UHE5 227 aa12.25□□□□□ -0.45
CLN6-218ENST00000637223 LY96Q9Y6Y9 160 aa12.25□□□□□ -0.45
CLN6-218ENST00000637223 TRGV11A0A075B6L2 103 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 FABP5P3A8MUU1 101 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 C9JCJ5 164 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 SH2D1AO60880 128 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 DAD1P61803 113 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 ZNF415Q09FC8 603 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 TMEM241Q24JQ0 296 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 TDRG1Q3Y452 100 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 CENPWQ5EE01 88 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 IBA57Q5T440 356 aaKnown RBP12.24□□□□□ -0.45
CLN6-218ENST00000637223 SMIM7Q9BQ49 75 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 PARLQ9H300 379 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 SDF2L1Q9HCN8 221 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 MDFICQ9P1T7 246 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 STARD9Q9P2P6 4700 aa12.24□□□□□ -0.45
CLN6-218ENST00000637223 TYMSP04818 313 aa12.23□□□□□ -0.45
CLN6-218ENST00000637223 TCL1AP56279 114 aa12.23□□□□□ -0.45
CLN6-218ENST00000637223 RHEBQ15382 184 aa12.23□□□□□ -0.45
CLN6-218ENST00000637223 FAM162BQ5T6X4 162 aa12.23□□□□□ -0.45
CLN6-218ENST00000637223 SMIM12Q96EX1 92 aa12.23□□□□□ -0.45
CLN6-218ENST00000637223 KCNS1Q96KK3 526 aa12.23□□□□□ -0.45
CLN6-218ENST00000637223 MLST8Q9BVC4 326 aa12.23□□□□□ -0.45
CLN6-218ENST00000637223 GNG4P50150 75 aa12.22□□□□□ -0.45
CLN6-218ENST00000637223 CEBPGP53567 150 aa12.22□□□□□ -0.45
CLN6-218ENST00000637223 DAZ2Q13117 558 aaKnown RBP12.22□□□□□ -0.45
CLN6-218ENST00000637223 ZNF674Q2M3X9 581 aa12.22□□□□□ -0.45
CLN6-218ENST00000637223 CLRN3Q8NCR9 226 aa12.22□□□□□ -0.45
CLN6-218ENST00000637223 IGKV3D-20A0A0C4DH25 116 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 IGHV3-16A0A0C4DH30 117 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 GAGE12BA1L429 117 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 M0R036 132 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 GAGE7O76087 117 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 ORM1P02763 201 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 GAGE12FP0CL80 117 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 GAGE12GP0CL81 117 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 GAGE12IP0CL82 117 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 HTN3P15516 51 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 PRR27Q6MZM9 219 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 CEMP1Q6PRD7 247 aaPredicted RBP12.21□□□□□ -0.45
CLN6-218ENST00000637223 Q6ZTI0 123 aa12.21□□□□□ -0.45
CLN6-218ENST00000637223 TRBV20OR9-2A0A075B6H5 130 aa12.2□□□□□ -0.46
CLN6-218ENST00000637223 TRGV1A0A0A0MS02 117 aa12.2□□□□□ -0.46
CLN6-218ENST00000637223 TRAV10A0A0B4J240 114 aa12.2□□□□□ -0.46
CLN6-218ENST00000637223 NUPR2A6NF83 97 aa12.2□□□□□ -0.46
CLN6-218ENST00000637223 PGPEP1LA6NFU8 196 aa12.2□□□□□ -0.46
CLN6-218ENST00000637223 IGLV2-8P01709 118 aa12.2□□□□□ -0.46
CLN6-218ENST00000637223 MGST1P10620 155 aaKnown RBP12.2□□□□□ -0.46
CLN6-218ENST00000637223 MRPL16Q9NX20 251 aaKnown RBP12.2□□□□□ -0.46
CLN6-218ENST00000637223 A0A087WWC5 75 aa12.19□□□□□ -0.46
CLN6-218ENST00000637223 TMSB15BA0A087X1C1 80 aa12.19□□□□□ -0.46
CLN6-218ENST00000637223 DEFB131BA0A096LNP1 70 aa12.19□□□□□ -0.46
CLN6-218ENST00000637223 SPINK4O60575 86 aa12.19□□□□□ -0.46
CLN6-218ENST00000637223 LINC00612Q8N6U2 182 aa12.19□□□□□ -0.46
CLN6-218ENST00000637223 TMEM242Q9NWH2 141 aa12.19□□□□□ -0.46
CLN6-218ENST00000637223 CSMD3Q7Z407 3707 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms