RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 CYB561D1Q8N8Q1 229 aa12.72□□□□□ -0.37
CLN6-214ENST00000636314 SDF2L1Q9HCN8 221 aa12.72□□□□□ -0.37
CLN6-214ENST00000636314 PRO0255Q9UI72 69 aa12.72□□□□□ -0.37
CLN6-214ENST00000636314 EPDR1Q9UM22 224 aa12.72□□□□□ -0.37
CLN6-214ENST00000636314 PSG8Q9UQ74 426 aa12.72□□□□□ -0.37
CLN6-214ENST00000636314 MRPS16Q9Y3D3 137 aaKnown RBP12.72□□□□□ -0.37
CLN6-214ENST00000636314 ICOSQ9Y6W8 199 aa12.72□□□□□ -0.37
CLN6-214ENST00000636314 A0A1W2PRE2 83 aa12.71□□□□□ -0.37
CLN6-214ENST00000636314 FLI1Q01543 452 aaPredicted RBP12.71□□□□□ -0.37
CLN6-214ENST00000636314 SLAQ13239 276 aa12.71□□□□□ -0.37
CLN6-214ENST00000636314 ZFP69Q49AA0 526 aa12.71□□□□□ -0.37
CLN6-214ENST00000636314 MAPKAPK5-AS1Q8N8E1 139 aa12.71□□□□□ -0.37
CLN6-214ENST00000636314 KCNS1Q96KK3 526 aa12.71□□□□□ -0.37
CLN6-214ENST00000636314 UPK3BQ9BT76 320 aa12.71□□□□□ -0.37
CLN6-214ENST00000636314 Q9H8V8 135 aa12.71□□□□□ -0.37
CLN6-214ENST00000636314 TRGV4A0A0C4DH28 118 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 IGHV3-16A0A0C4DH30 117 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 GNRH2O43555 120 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 TYMSP04818 313 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 TNP2Q05952 138 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 TTC32Q5I0X7 151 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 PRNTQ86SH4 94 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 C6orf223Q8N319 242 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 TMEM75Q8N9X5 138 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 RASL10AQ92737 203 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 C8orf49Q96NF6 230 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 CYTL1Q9NRR1 136 aa12.7□□□□□ -0.38
CLN6-214ENST00000636314 LRP1BQ9NZR2 4599 aa12.69□□□□□ -0.38
CLN6-214ENST00000636314 FBLL1A6NHQ2 334 aaKnown RBP12.69□□□□□ -0.38
CLN6-214ENST00000636314 GCGP01275 180 aa12.69□□□□□ -0.38
CLN6-214ENST00000636314 SFTA3P0C7M3 94 aa12.69□□□□□ -0.38
CLN6-214ENST00000636314 CRYBA4P53673 196 aa12.69□□□□□ -0.38
CLN6-214ENST00000636314 FGF8P55075 233 aaPredicted RBP12.69□□□□□ -0.38
CLN6-214ENST00000636314 UBE2G2P60604 165 aa12.69□□□□□ -0.38
CLN6-214ENST00000636314 FHL2Q14192 279 aa12.69□□□□□ -0.38
CLN6-214ENST00000636314 HHLA3Q9XRX5 114 aa12.69□□□□□ -0.38
CLN6-214ENST00000636314 M0R2P5 195 aa12.68□□□□□ -0.38
CLN6-214ENST00000636314 CDK2AP2O75956 126 aa12.68□□□□□ -0.38
CLN6-214ENST00000636314 IFNA7P01567 189 aa12.68□□□□□ -0.38
CLN6-214ENST00000636314 IGLV2-11P01706 119 aa12.68□□□□□ -0.38
CLN6-214ENST00000636314 ZNF345Q14585 488 aa12.68□□□□□ -0.38
CLN6-214ENST00000636314 SMUG1Q53HV7 270 aa12.68□□□□□ -0.38
CLN6-214ENST00000636314 ZNF479Q96JC4 524 aa12.68□□□□□ -0.38
CLN6-214ENST00000636314 TRAV4A0A0B4J268 109 aa12.67□□□□□ -0.38
CLN6-214ENST00000636314 MAP1LC3B2A6NCE7 125 aa12.67□□□□□ -0.38
CLN6-214ENST00000636314 PFN1P07737 140 aaKnown RBP12.67□□□□□ -0.38
CLN6-214ENST00000636314 PPT1P50897 306 aa12.67□□□□□ -0.38
CLN6-214ENST00000636314 ZNF80P51504 273 aaPredicted RBP12.67□□□□□ -0.38
CLN6-214ENST00000636314 SAPCD1Q5SSQ6 148 aa12.67□□□□□ -0.38
CLN6-214ENST00000636314 KCNRGQ8N5I3 272 aa12.67□□□□□ -0.38
CLN6-214ENST00000636314 MAP1LC3BQ9GZQ8 125 aa12.67□□□□□ -0.38
CLN6-214ENST00000636314 MRPL23Q16540 153 aaKnown RBP12.66□□□□□ -0.38
CLN6-214ENST00000636314 NKX6-2Q9C056 277 aaPredicted RBP12.66□□□□□ -0.38
CLN6-214ENST00000636314 TRAV34A0A0B4J273 112 aa12.65□□□□□ -0.38
CLN6-214ENST00000636314 FAM74A7A6NL05 159 aa12.65□□□□□ -0.38
CLN6-214ENST00000636314 PEX7O00628 323 aa12.65□□□□□ -0.38
CLN6-214ENST00000636314 OR4C5Q8NGB2 326 aa12.65□□□□□ -0.38
CLN6-214ENST00000636314 STOML3Q8TAV4 291 aa12.65□□□□□ -0.38
CLN6-214ENST00000636314 PCNPQ8WW12 178 aaKnown RBP12.65□□□□□ -0.38
CLN6-214ENST00000636314 C11orf21Q9P2W6 132 aa12.65□□□□□ -0.38
CLN6-214ENST00000636314 A0A1W2PPQ1 181 aa12.64□□□□□ -0.39
CLN6-214ENST00000636314 HIST1H2BAQ96A08 127 aa12.64□□□□□ -0.39
CLN6-214ENST00000636314 LINC00479Q96M42 142 aa12.64□□□□□ -0.39
CLN6-214ENST00000636314 KRTAP1-5Q9BYS1 174 aa12.64□□□□□ -0.39
CLN6-214ENST00000636314 ARL2-SNX15V9GYD0 113 aa12.64□□□□□ -0.39
CLN6-214ENST00000636314 KANTRA0A1W2PQU2 76 aa12.63□□□□□ -0.39
CLN6-214ENST00000636314 HMSDA8MTL9 139 aa12.63□□□□□ -0.39
CLN6-214ENST00000636314 ORM1P02763 201 aa12.63□□□□□ -0.39
CLN6-214ENST00000636314 SRIP30626 198 aa12.63□□□□□ -0.39
CLN6-214ENST00000636314 NEGR1Q7Z3B1 354 aa12.63□□□□□ -0.39
CLN6-214ENST00000636314 Q86TA4 180 aa12.63□□□□□ -0.39
CLN6-214ENST00000636314 OR11H4Q8NGC9 324 aa12.63□□□□□ -0.39
CLN6-214ENST00000636314 ZNF471Q9BX82 626 aaPredicted RBP12.63□□□□□ -0.39
CLN6-214ENST00000636314 APOBP04114 4563 aaKnown RBP12.63□□□□□ -0.39
CLN6-214ENST00000636314 A0A0D9SG52 128 aa12.62□□□□□ -0.39
CLN6-214ENST00000636314 C9JCJ5 164 aa12.62□□□□□ -0.39
CLN6-214ENST00000636314 K7EQD1 137 aa12.62□□□□□ -0.39
CLN6-214ENST00000636314 BCL2L11O43521 198 aa12.62□□□□□ -0.39
CLN6-214ENST00000636314 NXPH4O95158 308 aa12.62□□□□□ -0.39
CLN6-214ENST00000636314 GYPEP15421 78 aa12.62□□□□□ -0.39
CLN6-214ENST00000636314 ZNF876PQ49A33 203 aa12.62□□□□□ -0.39
CLN6-214ENST00000636314 SIVA1O15304 175 aa12.61□□□□□ -0.39
CLN6-214ENST00000636314 SEC11BP0C7V7 166 aa12.61□□□□□ -0.39
CLN6-214ENST00000636314 FHITP49789 147 aa12.61□□□□□ -0.39
CLN6-214ENST00000636314 UMAD1C9J7I0 102 aa12.6□□□□□ -0.39
CLN6-214ENST00000636314 CST9LP1Q5W188 147 aa12.6□□□□□ -0.39
CLN6-214ENST00000636314 LYPD5Q6UWN5 251 aa12.6□□□□□ -0.39
CLN6-214ENST00000636314 FAM213BQ8TBF2 198 aa12.6□□□□□ -0.39
CLN6-214ENST00000636314 C9orf85Q96MD7 179 aa12.6□□□□□ -0.39
CLN6-214ENST00000636314 TXNDC17Q9BRA2 123 aa12.6□□□□□ -0.39
CLN6-214ENST00000636314 UBE2G1P62253 170 aa12.59□□□□□ -0.39
CLN6-214ENST00000636314 EIF5AP63241 154 aaKnown RBP12.59□□□□□ -0.39
CLN6-214ENST00000636314 Q8N1X5 172 aa12.59□□□□□ -0.39
CLN6-214ENST00000636314 FMC1Q96HJ9 113 aa12.59□□□□□ -0.39
CLN6-214ENST00000636314 TCEAL7Q9BRU2 100 aa12.59□□□□□ -0.39
CLN6-214ENST00000636314 SCRT2Q9NQ03 307 aa12.59□□□□□ -0.39
CLN6-214ENST00000636314 FABP5P3A8MUU1 101 aa12.58□□□□□ -0.4
CLN6-214ENST00000636314 PFDN1O60925 122 aa12.58□□□□□ -0.4
CLN6-214ENST00000636314 RNASE3P12724 160 aaKnown RBP12.58□□□□□ -0.4
CLN6-214ENST00000636314 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms