RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 OR5AC2Q9NZP5 309 aa11.75□□□□□ -0.53
CLN6-212ENST00000636020 MBD2Q9UBB5 411 aa11.75□□□□□ -0.53
CLN6-212ENST00000636020 LSM5Q9Y4Y9 91 aaKnown RBP11.75□□□□□ -0.53
CLN6-212ENST00000636020 COX11Q9Y6N1 276 aa11.75□□□□□ -0.53
CLN6-212ENST00000636020 PET100P0DJ07 73 aa11.74□□□□□ -0.53
CLN6-212ENST00000636020 POLR2GP62487 172 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLN6-212ENST00000636020 C10orf113Q5VZT2 155 aa11.74□□□□□ -0.53
CLN6-212ENST00000636020 HYLS1Q96M11 299 aa11.74□□□□□ -0.53
CLN6-212ENST00000636020 IGHV3-16A0A0C4DH30 117 aa11.73□□□□□ -0.53
CLN6-212ENST00000636020 AGPAT2O15120 278 aa11.73□□□□□ -0.53
CLN6-212ENST00000636020 NKX2-5P52952 324 aaPredicted RBP11.73□□□□□ -0.53
CLN6-212ENST00000636020 MUC21Q5SSG8 566 aa11.73□□□□□ -0.53
CLN6-212ENST00000636020 DAZ4Q86SG3 579 aaKnown RBP11.73□□□□□ -0.53
CLN6-212ENST00000636020 DAZ3Q9NR90 486 aaKnown RBP11.73□□□□□ -0.53
CLN6-212ENST00000636020 PSENENQ9NZ42 101 aa11.73□□□□□ -0.53
CLN6-212ENST00000636020 PRELID1Q9Y255 219 aa11.73□□□□□ -0.53
CLN6-212ENST00000636020 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
CLN6-212ENST00000636020 FXYD6-FXYD2A0A087WZ82 144 aa11.72□□□□□ -0.53
CLN6-212ENST00000636020 HMSDA8MTL9 139 aa11.72□□□□□ -0.53
CLN6-212ENST00000636020 THAP6Q8TBB0 222 aa11.72□□□□□ -0.53
CLN6-212ENST00000636020 ZNF492Q9P255 531 aa11.72□□□□□ -0.53
CLN6-212ENST00000636020 TNFSF18Q9UNG2 199 aa11.72□□□□□ -0.53
CLN6-212ENST00000636020 LPAP08519 4548 aa11.72□□□□□ -0.53
CLN6-212ENST00000636020 SSSCA1O60232 199 aa11.71□□□□□ -0.53
CLN6-212ENST00000636020 NDUFB4O95168 129 aa11.71□□□□□ -0.53
CLN6-212ENST00000636020 ODF1Q14990 250 aa11.71□□□□□ -0.53
CLN6-212ENST00000636020 TOR2AQ5JU69 321 aa11.71□□□□□ -0.53
CLN6-212ENST00000636020 TMEM78Q5T7P6 136 aa11.71□□□□□ -0.53
CLN6-212ENST00000636020 GTSF1LQ9H1H1 148 aa11.71□□□□□ -0.53
CLN6-212ENST00000636020 IGKV2-40A0A087WW87 121 aaPredicted RBP11.7□□□□□ -0.54
CLN6-212ENST00000636020 IGKV2D-40P01614 121 aaPredicted RBP11.7□□□□□ -0.54
CLN6-212ENST00000636020 METTL15P1P0C7V9 234 aa11.7□□□□□ -0.54
CLN6-212ENST00000636020 C9orf62Q8N4C0 152 aa11.7□□□□□ -0.54
CLN6-212ENST00000636020 SLC25A29Q8N8R3 303 aa11.7□□□□□ -0.54
CLN6-212ENST00000636020 RPH3ALQ9UNE2 315 aa11.7□□□□□ -0.54
CLN6-212ENST00000636020 KRTAP9-6A0A140TA67 174 aa11.69□□□□□ -0.54
CLN6-212ENST00000636020 ARPC5O15511 151 aa11.69□□□□□ -0.54
CLN6-212ENST00000636020 TMEM183BQ1AE95 376 aa11.69□□□□□ -0.54
CLN6-212ENST00000636020 TMEM14EPQ6UXP3 125 aa11.69□□□□□ -0.54
CLN6-212ENST00000636020 TMEM183AQ8IXX5 376 aa11.69□□□□□ -0.54
CLN6-212ENST00000636020 SMIM8Q96KF7 97 aa11.69□□□□□ -0.54
CLN6-212ENST00000636020 MGST2Q99735 147 aa11.69□□□□□ -0.54
CLN6-212ENST00000636020 GGTLC3B5MD39 225 aa11.68□□□□□ -0.54
CLN6-212ENST00000636020 M0R2P5 195 aa11.68□□□□□ -0.54
CLN6-212ENST00000636020 HIST1H1EP10412 219 aaKnown RBP11.68□□□□□ -0.54
CLN6-212ENST00000636020 PVALBP20472 110 aaPredicted RBP11.68□□□□□ -0.54
CLN6-212ENST00000636020 TAS2R30P59541 319 aa11.68□□□□□ -0.54
CLN6-212ENST00000636020 LGALSLQ3ZCW2 172 aaPredicted RBP11.68□□□□□ -0.54
CLN6-212ENST00000636020 EXOC3-AS1Q8N2X6 119 aa11.68□□□□□ -0.54
CLN6-212ENST00000636020 RMI2Q96E14 147 aa11.68□□□□□ -0.54
CLN6-212ENST00000636020 AQP10Q96PS8 301 aa11.68□□□□□ -0.54
CLN6-212ENST00000636020 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
CLN6-212ENST00000636020 TRAV8-1A0A0A6YYK1 113 aa11.67□□□□□ -0.54
CLN6-212ENST00000636020 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
CLN6-212ENST00000636020 L7N2F9 121 aa11.67□□□□□ -0.54
CLN6-212ENST00000636020 TSC22D2O75157 780 aa11.67□□□□□ -0.54
CLN6-212ENST00000636020 VAMP2P63027 116 aa11.67□□□□□ -0.54
CLN6-212ENST00000636020 ZNF345Q14585 488 aa11.67□□□□□ -0.54
CLN6-212ENST00000636020 FAM122CQ6P4D5 195 aa11.67□□□□□ -0.54
CLN6-212ENST00000636020 DNAJC30Q96LL9 226 aa11.67□□□□□ -0.54
CLN6-212ENST00000636020 PRADC1Q9BSG0 188 aa11.67□□□□□ -0.54
CLN6-212ENST00000636020 LYRM2Q9NU23 88 aaPredicted RBP11.67□□□□□ -0.54
CLN6-212ENST00000636020 FAT4Q6V0I7 4981 aa11.66□□□□□ -0.54
CLN6-212ENST00000636020 IGSF23A1L1A6 192 aa11.66□□□□□ -0.54
CLN6-212ENST00000636020 FAM24AA6NFZ4 105 aa11.66□□□□□ -0.54
CLN6-212ENST00000636020 ZNF138P52744 262 aa11.66□□□□□ -0.54
CLN6-212ENST00000636020 ARL16Q0P5N6 197 aa11.66□□□□□ -0.54
CLN6-212ENST00000636020 PDE6HQ13956 83 aa11.66□□□□□ -0.54
CLN6-212ENST00000636020 ZNF266Q14584 549 aa11.66□□□□□ -0.54
CLN6-212ENST00000636020 VWC2Q2TAL6 325 aa11.66□□□□□ -0.54
CLN6-212ENST00000636020 KCNRGQ8N5I3 272 aa11.66□□□□□ -0.54
CLN6-212ENST00000636020 TIMM9Q9Y5J7 89 aa11.66□□□□□ -0.54
CLN6-212ENST00000636020 IGKV2D-24A0A075B6R9 120 aa11.65□□□□□ -0.54
CLN6-212ENST00000636020 TRBV6-4A0A1B0GX49 114 aa11.65□□□□□ -0.54
CLN6-212ENST00000636020 FBLL1A6NHQ2 334 aaKnown RBP11.65□□□□□ -0.54
CLN6-212ENST00000636020 RPL12P30050 165 aaKnown RBP11.65□□□□□ -0.54
CLN6-212ENST00000636020 RHOHQ15669 191 aa11.65□□□□□ -0.54
CLN6-212ENST00000636020 Q6ZRG5 221 aa11.65□□□□□ -0.54
CLN6-212ENST00000636020 TMEM252Q8N6L7 170 aa11.65□□□□□ -0.54
CLN6-212ENST00000636020 INO80EQ8NBZ0 244 aaPredicted RBP11.65□□□□□ -0.54
CLN6-212ENST00000636020 Q8TAT8 98 aa11.65□□□□□ -0.54
CLN6-212ENST00000636020 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.54
CLN6-212ENST00000636020 A0A0D9SG52 128 aa11.64□□□□□ -0.55
CLN6-212ENST00000636020 CAV2P51636 162 aa11.64□□□□□ -0.55
CLN6-212ENST00000636020 Q6AWC8 147 aa11.64□□□□□ -0.55
CLN6-212ENST00000636020 FAM159AQ6UWV7 190 aa11.64□□□□□ -0.55
CLN6-212ENST00000636020 TMUB2Q71RG4 321 aa11.64□□□□□ -0.55
CLN6-212ENST00000636020 OR1L4Q8NGR5 311 aa11.64□□□□□ -0.55
CLN6-212ENST00000636020 HSPB11Q9Y547 144 aa11.64□□□□□ -0.55
CLN6-212ENST00000636020 S100A11P31949 105 aa11.63□□□□□ -0.55
CLN6-212ENST00000636020 MIC13Q5XKP0 118 aa11.63□□□□□ -0.55
CLN6-212ENST00000636020 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
CLN6-212ENST00000636020 GGACTQ9BVM4 153 aa11.63□□□□□ -0.55
CLN6-212ENST00000636020 AAMDCQ9H7C9 122 aa11.63□□□□□ -0.55
CLN6-212ENST00000636020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.63□□□□□ -0.55
CLN6-212ENST00000636020 MUC2Q02817 5179 aa11.62□□□□□ -0.55
CLN6-212ENST00000636020 GNRH2O43555 120 aa11.62□□□□□ -0.55
CLN6-212ENST00000636020 CAMLGP49069 296 aa11.62□□□□□ -0.55
CLN6-212ENST00000636020 NHLH2Q02577 135 aa11.62□□□□□ -0.55
CLN6-212ENST00000636020 BAXQ07812 192 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms