RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 DAD1P61803 113 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 LSM3P62310 102 aaKnown RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 PPP3R1P63098 170 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 GNG5P63218 68 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 RUNX1Q01196 453 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 FABP5Q01469 135 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 HIST1H1AQ02539 215 aaPredicted RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 DHRS2Q13268 280 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 SNCBQ16143 134 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 SSX1Q16384 188 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 MPV17LQ2QL34 196 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 VMA21Q3ZAQ7 101 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 C6orf183Q5T699 404 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 C1orf134Q5TEV5 83 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 AADACL3Q5VUY0 350 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 HACD4Q5VWC8 232 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 NXNL2Q5VZ03 156 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 SPATA31B1PQ5VZV4 182 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM104BQ5XKR9 115 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 RPL13AP3Q6NVV1 102 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 FAHD1Q6P587 224 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 TOMM20LQ6UXN7 152 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF818PQ6ZRF7 136 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 Q6ZTI0 123 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 SSX7Q7RTT5 188 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 DHFR2Q86XF0 187 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 GID4Q8IVV7 300 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 C1orf158Q8N1D5 194 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 LINC00311Q8N616 119 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 GDPD1Q8N9F7 314 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 C8orf31Q8N9H6 132 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 C15orf53Q8NAA6 179 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 Q8NDZ9 215 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 OR4B1Q8NGF8 309 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 OR5A2Q8NGI9 324 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 OR5D14Q8NGL3 314 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 OR4A5Q8NH83 315 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 OR5AK2Q8NH90 309 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 RNASE11Q8TAA1 199 aaKnown RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 HAVCR2Q8TDQ0 301 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 RASSF5Q8WWW0 418 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 LINC00526Q96FQ7 95 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 ACY3Q96HD9 319 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 LINC00052Q96N35 136 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 YPEL4Q96NS1 127 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 CMSS1Q9BQ75 279 aaKnown RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 C7orf50Q9BRJ6 194 aaKnown RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 GINS4Q9BRT9 223 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 RHPN1-AS1Q9BWJ2 59 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 YIPF3Q9GZM5 350 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 SLC22A4Q9H015 551 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 CST11Q9H112 138 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 METTL9Q9H1A3 318 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 DCSTAMPQ9H295 470 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 MS4A6AQ9H2W1 248 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 RGCCQ9H4X1 137 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 HRASLSQ9HDD0 168 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 C12orf4Q9NQ89 552 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 KCNIP2Q9NS61 270 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 GID8Q9NWU2 228 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 ZMAT5Q9UDW3 170 aaKnown RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 CD300AQ9UGN4 299 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 PAIP2BQ9ULR5 123 aaKnown RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 FLVCR2Q9UPI3 526 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 BAIAP2Q9UQB8 552 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 C14orf166Q9Y224 244 aaKnown RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 POMPQ9Y244 141 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 RBMX2Q9Y388 322 aaKnown RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 NOP16Q9Y3C1 178 aaKnown RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 RBM7Q9Y580 266 aaKnown RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 TIMM8BQ9Y5J9 83 aaPredicted RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 OR51B2Q9Y5P1 312 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 NUBP2Q9Y5Y2 271 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 PUS1Q9Y606 427 aaKnown RBP eCLIP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 IGKV1D-37A0A075B6S9 117 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TRGV1A0A0A0MS02 117 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TRBV6-7A0A0A0MS04 114 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 A0A0A6YYH2 397 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TRAV8-2A0A0B4J237 113 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TRAV12-3A0A0B4J271 114 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TRGV4A0A0C4DH28 118 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 IGKV3OR2-268A0A0C4DH90 116 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 LOC100506127A0A0U1RQW1 187 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 LOC389332A0A1B0GUA5 103 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 UBE2L5PA0A1B0GUS4 154 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 OR4C46A6NHA9 309 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 A6NJ64 397 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM223BA6NKX1 122 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM212A6NML5 194 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF705FA8MVS1 300 aaPredicted RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 OOSP1A8MZH6 123 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 G3V3Q6 166 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 BOLA2-SMG1P6H3BVE0 249 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 I3L2K1 104 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF701M0R085 212 aaPredicted RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ISLRO14498 428 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 HMGB3O15347 200 aaKnown RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ORC5O43913 435 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 YPEL1O60688 119 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms