RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PGLYRP1O75594 196 aaPredicted RBP1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 MT-CO2P00403 227 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 IGLC1P0CG04 106 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 TRAPPC2P0DI81 140 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 TRAPPC2BP0DI82 140 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 RNASE2P10153 161 aaKnown RBP1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 PRSS3P35030 304 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 G6PCP35575 357 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 RPL5P46777 297 aaKnown RBP1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 DEFB131AP59861 70 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 GABARAPL2P60520 117 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 TSPAN5P62079 268 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 CATR1Q13166 79 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 TTC32Q5I0X7 151 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 GDF5OSQ5U4N7 250 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 AMTNQ6UX39 209 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 TCF24Q7RTU0 167 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 LHFPL1Q86WI0 220 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 C10orf67Q8IYJ2 551 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 OR5H6Q8NGV6 325 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 OR4X1Q8NH49 305 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 OR51H1Q8NH63 302 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 SLC25A46Q96AG3 418 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 LINC00167Q96N53 147 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 CHCHD7Q9BUK0 85 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 COMMD5Q9GZQ3 224 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 C6orf62Q9GZU0 229 aaPredicted RBP1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 HRASLSQ9HDD0 168 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 TXNL4BQ9NX01 149 aaKnown RBP1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 PRNDQ9UKY0 176 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 PUS1Q9Y606 427 aaKnown RBP eCLIP1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 RFNGQ9Y644 331 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 IGKV1D-37A0A075B6S9 117 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 NBDYA0A0U1RRE5 68 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 TMEM189A5PLL7 270 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 SMIM9A6NGZ8 99 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 J3QRK9 145 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 TCAPO15273 167 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 CYB5BO43169 146 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 CRXO43186 299 aaPredicted RBP1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF324O75467 553 aaPredicted RBP1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 KRASP01116 189 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 IFNA4P05014 189 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 LINC00869P0C866 280 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 DEFA4P12838 97 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 TSPOP30536 169 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 SDC2P34741 201 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 CBX5P45973 191 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 PSMB2P49721 201 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 CMC4P56277 68 aaPredicted RBP1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 GNG2P59768 71 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 ARPC4P59998 168 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 HSPE1P61604 102 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 MRPS15P82914 257 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 LINC00483Q53H64 154 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 C5orf47Q569G3 176 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 Q56UQ5 140 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 IDNKQ5T6J7 187 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 C1orf134Q5TEV5 83 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 FAM222AQ5U5X8 452 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF767PQ75MW2 155 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 C1orf158Q8N1D5 194 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 LHFPL5Q8TAF8 219 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 FRZBQ92765 325 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 BORCS5Q969J3 196 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 TMEM56Q96MV1 263 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 TP53RKQ96S44 253 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 TSC22D3Q99576 134 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 SDHCQ99643 169 aaPredicted RBP1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 GINS3Q9BRX5 216 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF2Q9BSG1 426 aaPredicted RBP1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 UPK3BQ9BT76 320 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 DCUN1D5Q9BTE7 237 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 ATG5Q9H1Y0 275 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 TPRKBQ9Y3C4 175 aa1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 RBM7Q9Y580 266 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-208ENST00000634926 IGKV3-7A0A075B6H7 116 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 IGLV2-18A0A075B6J9 118 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 IGKV2D-24A0A075B6R9 120 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 IGKV1OR2-108A0A075B7D4 117 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 A0A0J9YX75 114 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 C16orf90A8MZG2 172 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 M0R2N4 97 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 CORTO00230 105 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 GPR31O00270 319 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 GNG7O60262 68 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 SCO1O75880 301 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 CCNKO75909 580 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 TGFBR1P36897 503 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 LPAR6P43657 344 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 PSMB3P49720 205 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 TAS2R20P59543 309 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 FXYD4P59646 89 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 DEFB1P60022 68 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 KRTAP10-4P60372 401 aaPredicted RBP1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 YPEL3P61236 119 aaPredicted RBP1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 NMSQ5H8A3 153 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 PSMG4Q5JS54 123 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 UBE2NLQ5JXB2 153 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 PRSS54Q6PEW0 395 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms