RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 SDF2L1Q9HCN8 221 aa10.44□□□□□ -0.74
CDC42BPB-209ENST00000634889 GAGE12BA1L429 117 aa10.43□□□□□ -0.74
CDC42BPB-209ENST00000634889 SPINK4O60575 86 aa10.43□□□□□ -0.74
CDC42BPB-209ENST00000634889 GAGE7O76087 117 aa10.43□□□□□ -0.74
CDC42BPB-209ENST00000634889 GAGE12FP0CL80 117 aa10.43□□□□□ -0.74
CDC42BPB-209ENST00000634889 GAGE12GP0CL81 117 aa10.43□□□□□ -0.74
CDC42BPB-209ENST00000634889 GAGE12IP0CL82 117 aa10.43□□□□□ -0.74
CDC42BPB-209ENST00000634889 HTN3P15516 51 aa10.43□□□□□ -0.74
CDC42BPB-209ENST00000634889 TAGLN2P37802 199 aaKnown RBP10.43□□□□□ -0.74
CDC42BPB-209ENST00000634889 TMEM183AQ8IXX5 376 aa10.43□□□□□ -0.74
CDC42BPB-209ENST00000634889 C11orf52Q96A22 123 aa10.43□□□□□ -0.74
CDC42BPB-209ENST00000634889 NDUFAF3Q9BU61 184 aa10.43□□□□□ -0.74
CDC42BPB-209ENST00000634889 FABP5P3A8MUU1 101 aa10.42□□□□□ -0.74
CDC42BPB-209ENST00000634889 PDE6DO43924 150 aa10.42□□□□□ -0.74
CDC42BPB-209ENST00000634889 BCL2P10415 239 aa10.42□□□□□ -0.74
CDC42BPB-209ENST00000634889 MEF2BQ02080 365 aaPredicted RBP10.42□□□□□ -0.74
CDC42BPB-209ENST00000634889 Q6ZTI0 123 aa10.42□□□□□ -0.74
CDC42BPB-209ENST00000634889 LYPD6BQ8NI32 183 aa10.42□□□□□ -0.74
CDC42BPB-209ENST00000634889 LINC00476Q8WZB0 136 aa10.42□□□□□ -0.74
CDC42BPB-209ENST00000634889 SPXQ9BT56 116 aa10.42□□□□□ -0.74
CDC42BPB-209ENST00000634889 MDFICQ9P1T7 246 aa10.42□□□□□ -0.74
CDC42BPB-209ENST00000634889 VAX2Q9UIW0 290 aa10.42□□□□□ -0.74
CDC42BPB-209ENST00000634889 APLNQ9ULZ1 77 aa10.42□□□□□ -0.74
CDC42BPB-209ENST00000634889 DYNC2H1Q8NCM8 4307 aaKnown RBP10.41□□□□□ -0.74
CDC42BPB-209ENST00000634889 TRGV1A0A0A0MS02 117 aa10.41□□□□□ -0.74
CDC42BPB-209ENST00000634889 IGHV3-16A0A0C4DH30 117 aa10.41□□□□□ -0.74
CDC42BPB-209ENST00000634889 TYMSP04818 313 aa10.41□□□□□ -0.74
CDC42BPB-209ENST00000634889 ZC2HC1AQ96GY0 325 aa10.41□□□□□ -0.74
CDC42BPB-209ENST00000634889 TRGV2A0A075B6R0 118 aa10.4□□□□□ -0.74
CDC42BPB-209ENST00000634889 GNRH2O43555 120 aa10.4□□□□□ -0.74
CDC42BPB-209ENST00000634889 FAM162BQ5T6X4 162 aa10.4□□□□□ -0.74
CDC42BPB-209ENST00000634889 LGALS9CQ6DKI2 356 aa10.4□□□□□ -0.74
CDC42BPB-209ENST00000634889 C11orf21Q9P2W6 132 aa10.4□□□□□ -0.74
CDC42BPB-209ENST00000634889 LYSTQ99698 3801 aa10.4□□□□□ -0.75
CDC42BPB-209ENST00000634889 F5H768 121 aa10.39□□□□□ -0.75
CDC42BPB-209ENST00000634889 RPL35P42766 123 aaKnown RBP10.39□□□□□ -0.75
CDC42BPB-209ENST00000634889 ZNF674Q2M3X9 581 aa10.39□□□□□ -0.75
CDC42BPB-209ENST00000634889 C15orf53Q8NAA6 179 aa10.39□□□□□ -0.75
CDC42BPB-209ENST00000634889 RASL10AQ92737 203 aa10.39□□□□□ -0.75
CDC42BPB-209ENST00000634889 M0R2P5 195 aa10.38□□□□□ -0.75
CDC42BPB-209ENST00000634889 CRIP1P50238 77 aa10.38□□□□□ -0.75
CDC42BPB-209ENST00000634889 TMEM88Q6PEY1 159 aa10.38□□□□□ -0.75
CDC42BPB-209ENST00000634889 BAGE2Q86Y30 109 aa10.38□□□□□ -0.75
CDC42BPB-209ENST00000634889 MLST8Q9BVC4 326 aa10.38□□□□□ -0.75
CDC42BPB-209ENST00000634889 MRPL16Q9NX20 251 aaKnown RBP10.38□□□□□ -0.75
CDC42BPB-209ENST00000634889 IGKV3D-20A0A0C4DH25 116 aa10.37□□□□□ -0.75
CDC42BPB-209ENST00000634889 SH2D1AO60880 128 aa10.37□□□□□ -0.75
CDC42BPB-209ENST00000634889 LY6G6CO95867 125 aa10.37□□□□□ -0.75
CDC42BPB-209ENST00000634889 TEX261Q6UWH6 196 aa10.37□□□□□ -0.75
CDC42BPB-209ENST00000634889 SMIM12Q96EX1 92 aa10.37□□□□□ -0.75
CDC42BPB-209ENST00000634889 DERL1Q9BUN8 251 aa10.37□□□□□ -0.75
CDC42BPB-209ENST00000634889 PLECQ15149 4684 aaKnown RBP10.37□□□□□ -0.75
CDC42BPB-209ENST00000634889 B4DEV8 164 aa10.36□□□□□ -0.75
CDC42BPB-209ENST00000634889 ORM1P02763 201 aa10.36□□□□□ -0.75
CDC42BPB-209ENST00000634889 HOXA5P20719 270 aa10.36□□□□□ -0.75
CDC42BPB-209ENST00000634889 NHLRC2Q8NBF2 726 aa10.36□□□□□ -0.75
CDC42BPB-209ENST00000634889 C9orf85Q96MD7 179 aa10.36□□□□□ -0.75
CDC42BPB-209ENST00000634889 RBFOX3A6NFN3 312 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 KRBOX1C9JBD0 128 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 H3BNG1 76 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 P0DMU3 169 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 FAM231AP0DMU4 169 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 FAM231CP0DMU5 169 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 ASIPP42127 132 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 OR5I1Q13606 314 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 LINC01559Q495D7 138 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 CENPWQ5EE01 88 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 DNLZQ5SXM8 178 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 PTH2Q96A98 100 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 MED9Q9NWA0 146 aa10.35□□□□□ -0.75
CDC42BPB-209ENST00000634889 TMEM250H0YL14 139 aa10.34□□□□□ -0.75
CDC42BPB-209ENST00000634889 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
CDC42BPB-209ENST00000634889 S100A4P26447 101 aaKnown RBP10.34□□□□□ -0.75
CDC42BPB-209ENST00000634889 GNG4P50150 75 aa10.34□□□□□ -0.75
CDC42BPB-209ENST00000634889 ZNF506Q5JVG8 444 aa10.34□□□□□ -0.75
CDC42BPB-209ENST00000634889 IL36BQ9NZH7 164 aa10.34□□□□□ -0.75
CDC42BPB-209ENST00000634889 TRAV26-1A0A087WT03 109 aa10.33□□□□□ -0.76
CDC42BPB-209ENST00000634889 M0R036 132 aa10.33□□□□□ -0.76
CDC42BPB-209ENST00000634889 NDUFS6O75380 124 aaKnown RBP10.33□□□□□ -0.76
CDC42BPB-209ENST00000634889 SLAQ13239 276 aa10.33□□□□□ -0.76
CDC42BPB-209ENST00000634889 ZNF876PQ49A33 203 aa10.33□□□□□ -0.76
CDC42BPB-209ENST00000634889 PIK3CD-AS1Q5SR53 167 aa10.33□□□□□ -0.76
CDC42BPB-209ENST00000634889 ALMS1Q8TCU4 4167 aa10.33□□□□□ -0.76
CDC42BPB-209ENST00000634889 RYR3Q15413 4870 aa10.32□□□□□ -0.76
CDC42BPB-209ENST00000634889 TRAV4A0A0B4J268 109 aa10.32□□□□□ -0.76
CDC42BPB-209ENST00000634889 FAM210AQ96ND0 272 aa10.32□□□□□ -0.76
CDC42BPB-209ENST00000634889 RYR2Q92736 4967 aa10.32□□□□□ -0.76
CDC42BPB-209ENST00000634889 TRBV20OR9-2A0A075B6H5 130 aa10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 RAB19A4D1S5 217 aa10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 NUDT3O95989 172 aa10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 IGLV2-8P01709 118 aa10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 CXCL1P09341 107 aa10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 TOR2AQ5JU69 321 aa10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 PRR27Q6MZM9 219 aa10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 OR4C5Q8NGB2 326 aa10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 EIF5A2Q9GZV4 153 aaKnown RBP10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 BIN3Q9NQY0 253 aa10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 PRO0255Q9UI72 69 aa10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 SACSQ9NZJ4 4579 aa10.31□□□□□ -0.76
CDC42BPB-209ENST00000634889 A0A0J9YY99 117 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms