RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 TRAV8-1A0A0A6YYK1 113 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 CENPXA8MT69 81 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 DIRC3C9JPN6 131 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 K7EP13 123 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 M0R2P5 195 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 LYRM1O43325 122 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 OR7C2O60412 319 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 PVALBP20472 110 aaPredicted RBP8.51□□□□□ -1.05
LINC00339-206ENST00000634451 HBG1P69891 147 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 HBG2P69892 147 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 OR10J3Q5JRS4 329 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 FAM159AQ6UWV7 190 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 SLC25A29Q8N8R3 303 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 HYLS1Q96M11 299 aa8.51□□□□□ -1.05
LINC00339-206ENST00000634451 TRBV7-9A0A0J9YWB2 115 aa8.5□□□□□ -1.05
LINC00339-206ENST00000634451 H0YIZ8 118 aa8.5□□□□□ -1.05
LINC00339-206ENST00000634451 GNG5P63218 68 aa8.5□□□□□ -1.05
LINC00339-206ENST00000634451 UBE2L3P68036 154 aaKnown RBP8.5□□□□□ -1.05
LINC00339-206ENST00000634451 ATP6V1FQ16864 119 aa8.5□□□□□ -1.05
LINC00339-206ENST00000634451 SCXQ7RTU7 201 aa8.5□□□□□ -1.05
LINC00339-206ENST00000634451 SGK494Q96LW2 274 aa8.5□□□□□ -1.05
LINC00339-206ENST00000634451 C11orf21Q9P2W6 132 aa8.5□□□□□ -1.05
LINC00339-206ENST00000634451 Q9UF83 564 aa8.5□□□□□ -1.05
LINC00339-206ENST00000634451 RBAKDNA6NC62 111 aa8.49□□□□□ -1.05
LINC00339-206ENST00000634451 TIRAPP58753 221 aa8.49□□□□□ -1.05
LINC00339-206ENST00000634451 TDRG1Q3Y452 100 aa8.49□□□□□ -1.05
LINC00339-206ENST00000634451 TMEM75Q8N9X5 138 aa8.49□□□□□ -1.05
LINC00339-206ENST00000634451 WDR61Q9GZS3 305 aaKnown RBP8.49□□□□□ -1.05
LINC00339-206ENST00000634451 PLA2G1BP04054 148 aaKnown RBP8.48□□□□□ -1.05
LINC00339-206ENST00000634451 CSN1S1P47710 185 aa8.48□□□□□ -1.05
LINC00339-206ENST00000634451 ZNF80P51504 273 aaPredicted RBP8.48□□□□□ -1.05
LINC00339-206ENST00000634451 LRRC37A5PQ49AS3 106 aa8.48□□□□□ -1.05
LINC00339-206ENST00000634451 CFAP126Q5VTH2 177 aa8.48□□□□□ -1.05
LINC00339-206ENST00000634451 GOLT1AQ6ZVE7 132 aa8.48□□□□□ -1.05
LINC00339-206ENST00000634451 TRAV8-6A0A0B4J262 113 aa8.47□□□□□ -1.05
LINC00339-206ENST00000634451 FBLL1A6NHQ2 334 aaKnown RBP8.47□□□□□ -1.05
LINC00339-206ENST00000634451 H2AFB2P0C5Z0 115 aa8.47□□□□□ -1.05
LINC00339-206ENST00000634451 DAZ4Q86SG3 579 aaKnown RBP8.47□□□□□ -1.05
LINC00339-206ENST00000634451 BAALCQ8WXS3 180 aa8.47□□□□□ -1.05
LINC00339-206ENST00000634451 DAZ3Q9NR90 486 aaKnown RBP8.47□□□□□ -1.05
LINC00339-206ENST00000634451 PKHD1L1Q86WI1 4243 aa8.47□□□□□ -1.05
LINC00339-206ENST00000634451 RS1O15537 224 aa8.46□□□□□ -1.06
LINC00339-206ENST00000634451 C1QBP02746 253 aa8.46□□□□□ -1.06
LINC00339-206ENST00000634451 FFAR4Q5NUL3 377 aa8.46□□□□□ -1.06
LINC00339-206ENST00000634451 LELP1Q5T871 98 aa8.46□□□□□ -1.06
LINC00339-206ENST00000634451 DEFB104AQ8WTQ1 72 aa8.46□□□□□ -1.06
LINC00339-206ENST00000634451 PGPA6NDG6 321 aa8.45□□□□□ -1.06
LINC00339-206ENST00000634451 PGPEP1LA6NFU8 196 aa8.45□□□□□ -1.06
LINC00339-206ENST00000634451 HMGB3O15347 200 aaKnown RBP8.45□□□□□ -1.06
LINC00339-206ENST00000634451 CNPY1Q3B7I2 92 aa8.45□□□□□ -1.06
LINC00339-206ENST00000634451 ZNF876PQ49A33 203 aa8.45□□□□□ -1.06
LINC00339-206ENST00000634451 SMIM3Q9BZL3 60 aa8.45□□□□□ -1.06
LINC00339-206ENST00000634451 SDF2L1Q9HCN8 221 aa8.45□□□□□ -1.06
LINC00339-206ENST00000634451 LENEPQ9Y5L5 61 aa8.45□□□□□ -1.06
LINC00339-206ENST00000634451 TRAV21A0A0B4J279 112 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 GAGE12JA6NER3 117 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 PFN1P07737 140 aaKnown RBP8.44□□□□□ -1.06
LINC00339-206ENST00000634451 HNRNPA3P51991 378 aaKnown RBP8.44□□□□□ -1.06
LINC00339-206ENST00000634451 GAGE1Q13065 139 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 GAGE4Q13068 117 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 GAGE5Q13069 117 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 RHOHQ15669 191 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 GAGE13Q4V321 117 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 ZNF506Q5JVG8 444 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 SH2D6Q7Z4S9 175 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 ATP6V0E2Q8NHE4 81 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 ASB13Q8WXK3 278 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 GTSF1LQ9H1H1 148 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 TREM1Q9NP99 234 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 OTORQ9NRC9 128 aa8.44□□□□□ -1.06
LINC00339-206ENST00000634451 LINC00694P0DN24 101 aa8.43□□□□□ -1.06
LINC00339-206ENST00000634451 TMED6Q8WW62 240 aa8.43□□□□□ -1.06
LINC00339-206ENST00000634451 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
LINC00339-206ENST00000634451 PRADC1Q9BSG0 188 aa8.43□□□□□ -1.06
LINC00339-206ENST00000634451 SAMD10Q9BYL1 202 aa8.43□□□□□ -1.06
LINC00339-206ENST00000634451 NMES1Q9C002 83 aa8.43□□□□□ -1.06
LINC00339-206ENST00000634451 JPT2Q9H910 190 aa8.43□□□□□ -1.06
LINC00339-206ENST00000634451 WFDC1Q9HC57 220 aa8.43□□□□□ -1.06
LINC00339-206ENST00000634451 MBD2Q9UBB5 411 aa8.43□□□□□ -1.06
LINC00339-206ENST00000634451 TRBV6-4A0A1B0GX49 114 aa8.42□□□□□ -1.06
LINC00339-206ENST00000634451 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
LINC00339-206ENST00000634451 RAB2AP61019 212 aa8.42□□□□□ -1.06
LINC00339-206ENST00000634451 LAGE3Q14657 143 aa8.42□□□□□ -1.06
LINC00339-206ENST00000634451 KHDC3LQ587J8 217 aa8.42□□□□□ -1.06
LINC00339-206ENST00000634451 CMTM2Q8TAZ6 248 aa8.42□□□□□ -1.06
LINC00339-206ENST00000634451 CIRBP-AS1Q8TBR5 109 aa8.42□□□□□ -1.06
LINC00339-206ENST00000634451 ATP5SQ99766 215 aa8.42□□□□□ -1.06
LINC00339-206ENST00000634451 C14orf178Q8N769 122 aaPredicted RBP8.41□□□□□ -1.06
LINC00339-206ENST00000634451 TM2D2Q9BX73 214 aa8.41□□□□□ -1.06
LINC00339-206ENST00000634451 KCNIP2Q9NS61 270 aa8.41□□□□□ -1.06
LINC00339-206ENST00000634451 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
LINC00339-206ENST00000634451 FAM240BA0A1B0GVZ2 78 aa8.4□□□□□ -1.06
LINC00339-206ENST00000634451 C17orf112F2Z3M2 114 aa8.4□□□□□ -1.06
LINC00339-206ENST00000634451 IGLV2-11P01706 119 aa8.4□□□□□ -1.06
LINC00339-206ENST00000634451 IGLV2-8P01709 118 aa8.4□□□□□ -1.06
LINC00339-206ENST00000634451 H2BFSP57053 126 aa8.4□□□□□ -1.06
LINC00339-206ENST00000634451 SERTAD4-AS1Q5TG53 156 aa8.4□□□□□ -1.06
LINC00339-206ENST00000634451 OR2T35Q8NGX2 323 aa8.4□□□□□ -1.06
LINC00339-206ENST00000634451 CHAC1Q9BUX1 264 aa8.4□□□□□ -1.06
LINC00339-206ENST00000634451 PARLQ9H300 379 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms