RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 TVP23CQ96ET8 276 aa10.94□□□□□ -0.66
SNRNP48-203ENST00000634363 MANBALQ9NQG1 85 aa10.94□□□□□ -0.66
SNRNP48-203ENST00000634363 GNG13Q9P2W3 67 aa10.94□□□□□ -0.66
SNRNP48-203ENST00000634363 NAGKQ9UJ70 344 aa10.94□□□□□ -0.66
SNRNP48-203ENST00000634363 TRAV1-1A0A0B4J248 108 aa10.93□□□□□ -0.66
SNRNP48-203ENST00000634363 TRAV34A0A0B4J273 112 aa10.93□□□□□ -0.66
SNRNP48-203ENST00000634363 C16orf90A8MZG2 172 aa10.93□□□□□ -0.66
SNRNP48-203ENST00000634363 IGLV2-11P01706 119 aa10.93□□□□□ -0.66
SNRNP48-203ENST00000634363 DEFB130BP0DP73 79 aa10.93□□□□□ -0.66
SNRNP48-203ENST00000634363 DEFB130AP0DP74 79 aa10.93□□□□□ -0.66
SNRNP48-203ENST00000634363 UBE2G1P62253 170 aa10.93□□□□□ -0.66
SNRNP48-203ENST00000634363 TNP2Q05952 138 aa10.93□□□□□ -0.66
SNRNP48-203ENST00000634363 MUC21Q5SSG8 566 aa10.93□□□□□ -0.66
SNRNP48-203ENST00000634363 ALKAL2Q6UX46 152 aa10.93□□□□□ -0.66
SNRNP48-203ENST00000634363 AKR1C3P42330 323 aa10.92□□□□□ -0.66
SNRNP48-203ENST00000634363 SMUG1Q53HV7 270 aa10.92□□□□□ -0.66
SNRNP48-203ENST00000634363 Q6ZQT7 251 aa10.92□□□□□ -0.66
SNRNP48-203ENST00000634363 Q86TA4 180 aa10.92□□□□□ -0.66
SNRNP48-203ENST00000634363 C15orf53Q8NAA6 179 aa10.92□□□□□ -0.66
SNRNP48-203ENST00000634363 FMC1Q96HJ9 113 aa10.92□□□□□ -0.66
SNRNP48-203ENST00000634363 LINC00479Q96M42 142 aa10.92□□□□□ -0.66
SNRNP48-203ENST00000634363 C8orf49Q96NF6 230 aa10.92□□□□□ -0.66
SNRNP48-203ENST00000634363 FAT2Q9NYQ8 4349 aa10.91□□□□□ -0.66
SNRNP48-203ENST00000634363 PKHD1P08F94 4074 aa10.91□□□□□ -0.66
SNRNP48-203ENST00000634363 NUDT3O95989 172 aa10.91□□□□□ -0.66
SNRNP48-203ENST00000634363 GCGP01275 180 aa10.91□□□□□ -0.66
SNRNP48-203ENST00000634363 IFNA1P01562 189 aa10.91□□□□□ -0.66
SNRNP48-203ENST00000634363 ZNF415Q09FC8 603 aa10.91□□□□□ -0.66
SNRNP48-203ENST00000634363 IBA57Q5T440 356 aaKnown RBP10.91□□□□□ -0.66
SNRNP48-203ENST00000634363 GSN-AS1Q9NRJ2 163 aa10.91□□□□□ -0.66
SNRNP48-203ENST00000634363 BOLA1Q9Y3E2 137 aa10.91□□□□□ -0.66
SNRNP48-203ENST00000634363 DNAH2Q9P225 4427 aa10.9□□□□□ -0.66
SNRNP48-203ENST00000634363 TRGV11A0A075B6L2 103 aa10.9□□□□□ -0.66
SNRNP48-203ENST00000634363 F5H768 121 aa10.9□□□□□ -0.66
SNRNP48-203ENST00000634363 TCL1AP56279 114 aa10.9□□□□□ -0.66
SNRNP48-203ENST00000634363 CCL20P78556 96 aa10.9□□□□□ -0.66
SNRNP48-203ENST00000634363 DAZ2Q13117 558 aaKnown RBP10.9□□□□□ -0.66
SNRNP48-203ENST00000634363 C11orf72Q8NBR9 251 aa10.9□□□□□ -0.66
SNRNP48-203ENST00000634363 TP53TG3Q9ULZ0 132 aa10.9□□□□□ -0.66
SNRNP48-203ENST00000634363 SCO2A0A1W2PP80 73 aa10.89□□□□□ -0.67
SNRNP48-203ENST00000634363 PFN1P07737 140 aaKnown RBP10.89□□□□□ -0.67
SNRNP48-203ENST00000634363 FAM3BP58499 235 aaPredicted RBP10.89□□□□□ -0.67
SNRNP48-203ENST00000634363 TMEM183BQ1AE95 376 aa10.89□□□□□ -0.67
SNRNP48-203ENST00000634363 TMEM183AQ8IXX5 376 aa10.89□□□□□ -0.67
SNRNP48-203ENST00000634363 MAPKAPK5-AS1Q8N8E1 139 aa10.89□□□□□ -0.67
SNRNP48-203ENST00000634363 KCNS1Q96KK3 526 aa10.89□□□□□ -0.67
SNRNP48-203ENST00000634363 SDF2L1Q9HCN8 221 aa10.89□□□□□ -0.67
SNRNP48-203ENST00000634363 ZFP30Q9Y2G7 519 aa10.89□□□□□ -0.67
SNRNP48-203ENST00000634363 NBDYA0A0U1RRE5 68 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 GAGE12BA1L429 117 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 GAGE7O76087 117 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 ATP5G1P05496 136 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 S100A9P06702 114 aaKnown RBP10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 GAGE12FP0CL80 117 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 GAGE12GP0CL81 117 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 GAGE12IP0CL82 117 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 BLOC1S1P78537 153 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 TDRG1Q3Y452 100 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 C6orf223Q8N319 242 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 TXNDC17Q9BRA2 123 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 KLF12Q9Y4X4 402 aa10.88□□□□□ -0.67
SNRNP48-203ENST00000634363 TRGV1A0A0A0MS02 117 aa10.87□□□□□ -0.67
SNRNP48-203ENST00000634363 TRBV6-1A0A0K0K1D8 114 aa10.87□□□□□ -0.67
SNRNP48-203ENST00000634363 ZNF80P51504 273 aaPredicted RBP10.87□□□□□ -0.67
SNRNP48-203ENST00000634363 LINC00612Q8N6U2 182 aa10.87□□□□□ -0.67
SNRNP48-203ENST00000634363 PKD1P98161 4303 aa10.86□□□□□ -0.67
SNRNP48-203ENST00000634363 TRGV2A0A075B6R0 118 aa10.86□□□□□ -0.67
SNRNP48-203ENST00000634363 LTAP01374 205 aa10.86□□□□□ -0.67
SNRNP48-203ENST00000634363 BCL2P10415 239 aa10.86□□□□□ -0.67
SNRNP48-203ENST00000634363 TAGLN2P37802 199 aaKnown RBP10.86□□□□□ -0.67
SNRNP48-203ENST00000634363 CCL18P55774 89 aa10.86□□□□□ -0.67
SNRNP48-203ENST00000634363 MEF2BQ02080 365 aaPredicted RBP10.86□□□□□ -0.67
SNRNP48-203ENST00000634363 Q6ZTI0 123 aa10.86□□□□□ -0.67
SNRNP48-203ENST00000634363 ZNRF2Q8NHG8 242 aa10.86□□□□□ -0.67
SNRNP48-203ENST00000634363 MDFICQ9P1T7 246 aa10.86□□□□□ -0.67
SNRNP48-203ENST00000634363 FABP5P3A8MUU1 101 aa10.85□□□□□ -0.67
SNRNP48-203ENST00000634363 SPINK4O60575 86 aa10.85□□□□□ -0.67
SNRNP48-203ENST00000634363 CDK2AP2O75956 126 aa10.85□□□□□ -0.67
SNRNP48-203ENST00000634363 TYMSP04818 313 aa10.85□□□□□ -0.67
SNRNP48-203ENST00000634363 VAX2Q9UIW0 290 aa10.85□□□□□ -0.67
SNRNP48-203ENST00000634363 IGHV3-16A0A0C4DH30 117 aa10.84□□□□□ -0.67
SNRNP48-203ENST00000634363 GNRH2O43555 120 aa10.84□□□□□ -0.67
SNRNP48-203ENST00000634363 PDE6DO43924 150 aa10.84□□□□□ -0.67
SNRNP48-203ENST00000634363 C11orf52Q96A22 123 aa10.84□□□□□ -0.67
SNRNP48-203ENST00000634363 ZC2HC1AQ96GY0 325 aa10.84□□□□□ -0.67
SNRNP48-203ENST00000634363 SPXQ9BT56 116 aa10.84□□□□□ -0.67
SNRNP48-203ENST00000634363 MRPL16Q9NX20 251 aaKnown RBP10.84□□□□□ -0.67
SNRNP48-203ENST00000634363 LINC00588Q9Y4M8 146 aa10.84□□□□□ -0.67
SNRNP48-203ENST00000634363 DNAH17Q9UFH2 4485 aa10.84□□□□□ -0.67
SNRNP48-203ENST00000634363 RPL35P42766 123 aaKnown RBP10.83□□□□□ -0.68
SNRNP48-203ENST00000634363 FAM162BQ5T6X4 162 aa10.83□□□□□ -0.68
SNRNP48-203ENST00000634363 COX8CQ7Z4L0 72 aa10.83□□□□□ -0.68
SNRNP48-203ENST00000634363 BAGE2Q86Y30 109 aa10.83□□□□□ -0.68
SNRNP48-203ENST00000634363 NHLRC2Q8NBF2 726 aa10.83□□□□□ -0.68
SNRNP48-203ENST00000634363 C11orf21Q9P2W6 132 aa10.83□□□□□ -0.68
SNRNP48-203ENST00000634363 ORM1P02763 201 aa10.82□□□□□ -0.68
SNRNP48-203ENST00000634363 OR5I1Q13606 314 aa10.82□□□□□ -0.68
SNRNP48-203ENST00000634363 SPATA12Q7Z6I5 190 aa10.82□□□□□ -0.68
SNRNP48-203ENST00000634363 C18orf15Q96N68 181 aa10.82□□□□□ -0.68
SNRNP48-203ENST00000634363 B4DEV8 164 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms