RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 ZNF705AQ6ZN79 300 aaPredicted RBP10.71□□□□□ -0.69
LIMS4-203ENST00000632758 OR2D3Q8NGH3 330 aa10.71□□□□□ -0.69
LIMS4-203ENST00000632758 OR10G8Q8NGN5 311 aa10.71□□□□□ -0.69
LIMS4-203ENST00000632758 GOLT1BQ9Y3E0 138 aa10.71□□□□□ -0.69
LIMS4-203ENST00000632758 GRIFINA4D1Z8 144 aa10.7□□□□□ -0.7
LIMS4-203ENST00000632758 TMEM189A5PLL7 270 aa10.7□□□□□ -0.7
LIMS4-203ENST00000632758 ZNF705GA8MUZ8 300 aaPredicted RBP10.7□□□□□ -0.7
LIMS4-203ENST00000632758 AZU1P20160 251 aa10.7□□□□□ -0.7
LIMS4-203ENST00000632758 LINC01559Q495D7 138 aa10.7□□□□□ -0.7
LIMS4-203ENST00000632758 ATRAIDQ6UW56 229 aa10.7□□□□□ -0.7
LIMS4-203ENST00000632758 FAM159AQ6UWV7 190 aa10.7□□□□□ -0.7
LIMS4-203ENST00000632758 Q6ZWC4 215 aa10.7□□□□□ -0.7
LIMS4-203ENST00000632758 RETNQ9HD89 108 aa10.7□□□□□ -0.7
LIMS4-203ENST00000632758 V9GYV3 84 aa10.7□□□□□ -0.7
LIMS4-203ENST00000632758 C7orf77A4D0Y5 90 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 B4DEV8 164 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 GZMBP10144 247 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 SVBPQ8N300 66 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 C15orf54Q8N8G6 183 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 RNF183Q96D59 192 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 RCHY1Q96PM5 261 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 PYGO2Q9BRQ0 406 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 RPP21Q9H633 154 aaKnown RBP10.69□□□□□ -0.7
LIMS4-203ENST00000632758 TYMSP04818 313 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 TDRG1Q3Y452 100 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 TMEM256Q8N2U0 113 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 X6R8D5 127 aa10.69□□□□□ -0.7
LIMS4-203ENST00000632758 NBEAL2Q6ZNJ1 2754 aa10.68□□□□□ -0.7
LIMS4-203ENST00000632758 CBY3A6NI87 242 aa10.68□□□□□ -0.7
LIMS4-203ENST00000632758 SPRY2O43597 315 aa10.68□□□□□ -0.7
LIMS4-203ENST00000632758 SNAPINO95295 136 aa10.68□□□□□ -0.7
LIMS4-203ENST00000632758 OVOL2Q9BRP0 275 aa10.68□□□□□ -0.7
LIMS4-203ENST00000632758 LINC00467Q9BRT7 94 aa10.68□□□□□ -0.7
LIMS4-203ENST00000632758 RPS10P5Q9NQ39 176 aa10.68□□□□□ -0.7
LIMS4-203ENST00000632758 MT-ND4LP03901 98 aa10.67□□□□□ -0.7
LIMS4-203ENST00000632758 OR11H2Q8NH07 326 aa10.67□□□□□ -0.7
LIMS4-203ENST00000632758 KCNS1Q96KK3 526 aa10.67□□□□□ -0.7
LIMS4-203ENST00000632758 MDFICQ9P1T7 246 aa10.67□□□□□ -0.7
LIMS4-203ENST00000632758 DNAH9Q9NYC9 4486 aa10.67□□□□□ -0.7
LIMS4-203ENST00000632758 ANAPC16Q96DE5 110 aa10.66□□□□□ -0.7
LIMS4-203ENST00000632758 IGHV3-16A0A0C4DH30 117 aa10.65□□□□□ -0.7
LIMS4-203ENST00000632758 RHEBQ15382 184 aa10.65□□□□□ -0.7
LIMS4-203ENST00000632758 RRN3P1Q2M238 152 aa10.65□□□□□ -0.7
LIMS4-203ENST00000632758 GTSF1Q8WW33 167 aa10.65□□□□□ -0.7
LIMS4-203ENST00000632758 HUWE1Q7Z6Z7 4374 aaKnown RBP10.65□□□□□ -0.7
LIMS4-203ENST00000632758 MEGF8Q7Z7M0 2845 aa10.65□□□□□ -0.71
LIMS4-203ENST00000632758 PPP1R2P9O14990 202 aa10.65□□□□□ -0.71
LIMS4-203ENST00000632758 RNASE3P12724 160 aaKnown RBP10.65□□□□□ -0.71
LIMS4-203ENST00000632758 S100A1P23297 94 aa10.65□□□□□ -0.71
LIMS4-203ENST00000632758 TCL1AP56279 114 aa10.65□□□□□ -0.71
LIMS4-203ENST00000632758 RPS20P60866 119 aaKnown RBP10.65□□□□□ -0.71
LIMS4-203ENST00000632758 NEU1Q99519 415 aa10.65□□□□□ -0.71
LIMS4-203ENST00000632758 TM2D3Q9BRN9 247 aa10.65□□□□□ -0.71
LIMS4-203ENST00000632758 GSN-AS1Q9NRJ2 163 aa10.65□□□□□ -0.71
LIMS4-203ENST00000632758 TP53TG1Q9Y2A0 90 aa10.65□□□□□ -0.71
LIMS4-203ENST00000632758 TIMM8BQ9Y5J9 83 aaPredicted RBP10.65□□□□□ -0.71
LIMS4-203ENST00000632758 TRGV11A0A075B6L2 103 aa10.64□□□□□ -0.71
LIMS4-203ENST00000632758 A8MWL6 223 aa10.64□□□□□ -0.71
LIMS4-203ENST00000632758 ARMS2P0C7Q2 107 aa10.64□□□□□ -0.71
LIMS4-203ENST00000632758 ASIPP42127 132 aa10.64□□□□□ -0.71
LIMS4-203ENST00000632758 CT83Q5H943 113 aa10.64□□□□□ -0.71
LIMS4-203ENST00000632758 C11orf72Q8NBR9 251 aa10.64□□□□□ -0.71
LIMS4-203ENST00000632758 RNASE8Q8TDE3 154 aaKnown RBP10.64□□□□□ -0.71
LIMS4-203ENST00000632758 TSKUQ8WUA8 353 aa10.64□□□□□ -0.71
LIMS4-203ENST00000632758 CTDSP1Q9GZU7 261 aa10.64□□□□□ -0.71
LIMS4-203ENST00000632758 A0A087WWC5 75 aa10.63□□□□□ -0.71
LIMS4-203ENST00000632758 MUC21A0A0G2JKD1 596 aa10.63□□□□□ -0.71
LIMS4-203ENST00000632758 MUC21A0A140T8X8 626 aa10.63□□□□□ -0.71
LIMS4-203ENST00000632758 PLAC8L1A1L4L8 177 aa10.63□□□□□ -0.71
LIMS4-203ENST00000632758 H3BVH4 76 aa10.63□□□□□ -0.71
LIMS4-203ENST00000632758 DEFB4AO15263 64 aa10.63□□□□□ -0.71
LIMS4-203ENST00000632758 IGLC6P0CF74 106 aa10.63□□□□□ -0.71
LIMS4-203ENST00000632758 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
LIMS4-203ENST00000632758 B9D2Q9BPU9 175 aa10.63□□□□□ -0.71
LIMS4-203ENST00000632758 IL36BQ9NZH7 164 aa10.63□□□□□ -0.71
LIMS4-203ENST00000632758 SMIM27A0A1W2PRY6 76 aa10.62□□□□□ -0.71
LIMS4-203ENST00000632758 XKRY2A2RUG3 117 aa10.62□□□□□ -0.71
LIMS4-203ENST00000632758 SMIM9A6NGZ8 99 aa10.62□□□□□ -0.71
LIMS4-203ENST00000632758 CXCL1P09341 107 aa10.62□□□□□ -0.71
LIMS4-203ENST00000632758 FAM3BP58499 235 aaPredicted RBP10.62□□□□□ -0.71
LIMS4-203ENST00000632758 DNLZQ5SXM8 178 aa10.62□□□□□ -0.71
LIMS4-203ENST00000632758 FER1L6-AS1Q8NA97 138 aa10.62□□□□□ -0.71
LIMS4-203ENST00000632758 TMEM263Q8WUH6 116 aaKnown RBP10.62□□□□□ -0.71
LIMS4-203ENST00000632758 SPATA25Q9BR10 227 aa10.62□□□□□ -0.71
LIMS4-203ENST00000632758 TPPP3Q9BW30 176 aa10.62□□□□□ -0.71
LIMS4-203ENST00000632758 IGHV4-28A0A0C4DH34 117 aa10.61□□□□□ -0.71
LIMS4-203ENST00000632758 EMP1P54849 157 aa10.61□□□□□ -0.71
LIMS4-203ENST00000632758 SSTP61278 116 aa10.61□□□□□ -0.71
LIMS4-203ENST00000632758 LYZL1Q6UWQ5 148 aa10.61□□□□□ -0.71
LIMS4-203ENST00000632758 Q8NAQ8 132 aa10.61□□□□□ -0.71
LIMS4-203ENST00000632758 C16orf74Q96GX8 76 aa10.61□□□□□ -0.71
LIMS4-203ENST00000632758 PGLYRP4Q96LB8 373 aa10.61□□□□□ -0.71
LIMS4-203ENST00000632758 C9orf85Q96MD7 179 aa10.61□□□□□ -0.71
LIMS4-203ENST00000632758 SSBP4Q9BWG4 385 aaPredicted RBP10.61□□□□□ -0.71
LIMS4-203ENST00000632758 TMEM242Q9NWH2 141 aa10.61□□□□□ -0.71
LIMS4-203ENST00000632758 PRKDCP78527 4128 aaKnown RBP10.61□□□□□ -0.71
LIMS4-203ENST00000632758 HIGD1CA8MV81 97 aa10.6□□□□□ -0.71
LIMS4-203ENST00000632758 SCO1O75880 301 aa10.6□□□□□ -0.71
LIMS4-203ENST00000632758 FOXA3P55318 350 aaPredicted RBP10.6□□□□□ -0.71
LIMS4-203ENST00000632758 ZNF415Q09FC8 603 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms