RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 PRADC1Q9BSG0 188 aa10.37□□□□□ -0.75
PDLIM3-213ENST00000629667 UBR4Q5T4S7 5183 aa10.37□□□□□ -0.75
PDLIM3-213ENST00000629667 HMCN2Q8NDA2 5059 aa10.36□□□□□ -0.75
PDLIM3-213ENST00000629667 LRP1Q07954 4544 aaKnown RBP10.36□□□□□ -0.75
PDLIM3-213ENST00000629667 TRAV6A0A075B6T7 132 aa10.36□□□□□ -0.75
PDLIM3-213ENST00000629667 DIRC3C9JPN6 131 aa10.36□□□□□ -0.75
PDLIM3-213ENST00000629667 IL7P13232 177 aa10.36□□□□□ -0.75
PDLIM3-213ENST00000629667 WFDC2Q14508 124 aa10.36□□□□□ -0.75
PDLIM3-213ENST00000629667 KCNIP2Q9NS61 270 aa10.36□□□□□ -0.75
PDLIM3-213ENST00000629667 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 TRAV21A0A0B4J279 112 aa10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 LECT2O14960 151 aa10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 TYMSP04818 313 aa10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 UBE2L3P68036 154 aaKnown RBP10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 NHLH2Q02577 135 aa10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 RHOHQ15669 191 aa10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 OR5C1Q8NGR4 320 aa10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 TMED6Q8WW62 240 aa10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 HYLS1Q96M11 299 aa10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 ATP5SQ99766 215 aa10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 SDF2L1Q9HCN8 221 aa10.35□□□□□ -0.75
PDLIM3-213ENST00000629667 TRBV6-4A0A1B0GX49 114 aa10.34□□□□□ -0.75
PDLIM3-213ENST00000629667 TCRBP04435 133 aa10.34□□□□□ -0.75
PDLIM3-213ENST00000629667 IL15RAQ13261 267 aa10.34□□□□□ -0.75
PDLIM3-213ENST00000629667 SCXQ7RTU7 201 aa10.34□□□□□ -0.75
PDLIM3-213ENST00000629667 KCNS1Q96KK3 526 aa10.34□□□□□ -0.75
PDLIM3-213ENST00000629667 GTSF1LQ9H1H1 148 aa10.34□□□□□ -0.75
PDLIM3-213ENST00000629667 RPH3ALQ9UNE2 315 aa10.34□□□□□ -0.75
PDLIM3-213ENST00000629667 TRAV8-3A0A0A6YYJ7 113 aa10.33□□□□□ -0.76
PDLIM3-213ENST00000629667 LYRM1O43325 122 aa10.33□□□□□ -0.76
PDLIM3-213ENST00000629667 CIDEAO60543 219 aa10.33□□□□□ -0.76
PDLIM3-213ENST00000629667 ZNF876PQ49A33 203 aa10.33□□□□□ -0.76
PDLIM3-213ENST00000629667 ATP6V0E2Q8NHE4 81 aa10.33□□□□□ -0.76
PDLIM3-213ENST00000629667 CMTM2Q8TAZ6 248 aa10.33□□□□□ -0.76
PDLIM3-213ENST00000629667 NUDT15Q9NV35 164 aa10.33□□□□□ -0.76
PDLIM3-213ENST00000629667 PLA2G2DQ9UNK4 145 aa10.33□□□□□ -0.76
PDLIM3-213ENST00000629667 IGHV3-73A0A0B4J1V6 119 aa10.32□□□□□ -0.76
PDLIM3-213ENST00000629667 C17orf112F2Z3M2 114 aa10.32□□□□□ -0.76
PDLIM3-213ENST00000629667 F6UZH7 168 aa10.32□□□□□ -0.76
PDLIM3-213ENST00000629667 PLA2G10O15496 165 aa10.32□□□□□ -0.76
PDLIM3-213ENST00000629667 OXTP01178 125 aa10.32□□□□□ -0.76
PDLIM3-213ENST00000629667 LINC01620Q4KN68 170 aa10.32□□□□□ -0.76
PDLIM3-213ENST00000629667 CFAP126Q5VTH2 177 aa10.32□□□□□ -0.76
PDLIM3-213ENST00000629667 ASB13Q8WXK3 278 aa10.32□□□□□ -0.76
PDLIM3-213ENST00000629667 WDR61Q9GZS3 305 aaKnown RBP10.32□□□□□ -0.76
PDLIM3-213ENST00000629667 RS1O15537 224 aa10.31□□□□□ -0.76
PDLIM3-213ENST00000629667 KHDC3LQ587J8 217 aa10.31□□□□□ -0.76
PDLIM3-213ENST00000629667 FAM74A1Q5RGS3 127 aa10.31□□□□□ -0.76
PDLIM3-213ENST00000629667 Q8N3U1 123 aa10.31□□□□□ -0.76
PDLIM3-213ENST00000629667 NMES1Q9C002 83 aa10.31□□□□□ -0.76
PDLIM3-213ENST00000629667 SH3BGRL3Q9H299 93 aa10.31□□□□□ -0.76
PDLIM3-213ENST00000629667 TREM1Q9NP99 234 aa10.31□□□□□ -0.76
PDLIM3-213ENST00000629667 FAT3Q8TDW7 4589 aa10.31□□□□□ -0.76
PDLIM3-213ENST00000629667 PGPA6NDG6 321 aa10.3□□□□□ -0.76
PDLIM3-213ENST00000629667 RBFOX3A6NFN3 312 aa10.3□□□□□ -0.76
PDLIM3-213ENST00000629667 TAS2R45P59539 299 aa10.3□□□□□ -0.76
PDLIM3-213ENST00000629667 TOR2AQ5JU69 321 aa10.3□□□□□ -0.76
PDLIM3-213ENST00000629667 BAALCQ8WXS3 180 aa10.3□□□□□ -0.76
PDLIM3-213ENST00000629667 OTORQ9NRC9 128 aa10.3□□□□□ -0.76
PDLIM3-213ENST00000629667 H2AFB2P0C5Z0 115 aa10.29□□□□□ -0.76
PDLIM3-213ENST00000629667 MGST1P10620 155 aaKnown RBP10.29□□□□□ -0.76
PDLIM3-213ENST00000629667 ASAH1Q13510 395 aa10.29□□□□□ -0.76
PDLIM3-213ENST00000629667 DPPA3Q6W0C5 159 aa10.29□□□□□ -0.76
PDLIM3-213ENST00000629667 GOLT1AQ6ZVE7 132 aa10.29□□□□□ -0.76
PDLIM3-213ENST00000629667 DAZ4Q86SG3 579 aaKnown RBP10.29□□□□□ -0.76
PDLIM3-213ENST00000629667 CHAC1Q9BUX1 264 aa10.29□□□□□ -0.76
PDLIM3-213ENST00000629667 RBM38Q9H0Z9 239 aaKnown RBP10.29□□□□□ -0.76
PDLIM3-213ENST00000629667 DAZ3Q9NR90 486 aaKnown RBP10.29□□□□□ -0.76
PDLIM3-213ENST00000629667 COX11Q9Y6N1 276 aa10.29□□□□□ -0.76
PDLIM3-213ENST00000629667 TRAV8-1A0A0A6YYK1 113 aa10.28□□□□□ -0.76
PDLIM3-213ENST00000629667 GGTLC3B5MD39 225 aa10.28□□□□□ -0.76
PDLIM3-213ENST00000629667 FFAR4Q5NUL3 377 aa10.28□□□□□ -0.76
PDLIM3-213ENST00000629667 TVP23CQ96ET8 276 aa10.28□□□□□ -0.76
PDLIM3-213ENST00000629667 MBD2Q9UBB5 411 aa10.28□□□□□ -0.76
PDLIM3-213ENST00000629667 KRTAP10-4P60372 401 aaPredicted RBP10.27□□□□□ -0.77
PDLIM3-213ENST00000629667 Q8N976 141 aa10.27□□□□□ -0.77
PDLIM3-213ENST00000629667 OR5AC2Q9NZP5 309 aa10.27□□□□□ -0.77
PDLIM3-213ENST00000629667 EIF3GO75821 320 aaKnown RBP eCLIP10.26□□□□□ -0.77
PDLIM3-213ENST00000629667 ACOT6Q3I5F7 207 aaPredicted RBP10.26□□□□□ -0.77
PDLIM3-213ENST00000629667 LRRC37A5PQ49AS3 106 aa10.26□□□□□ -0.77
PDLIM3-213ENST00000629667 ARL6IP6Q8N6S5 226 aa10.26□□□□□ -0.77
PDLIM3-213ENST00000629667 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
PDLIM3-213ENST00000629667 RMI2Q96E14 147 aa10.26□□□□□ -0.77
PDLIM3-213ENST00000629667 NDFIP1Q9BT67 221 aa10.26□□□□□ -0.77
PDLIM3-213ENST00000629667 GAGE12JA6NER3 117 aa10.25□□□□□ -0.77
PDLIM3-213ENST00000629667 PGPEP1LA6NFU8 196 aa10.25□□□□□ -0.77
PDLIM3-213ENST00000629667 GAGE1Q13065 139 aa10.25□□□□□ -0.77
PDLIM3-213ENST00000629667 GAGE4Q13068 117 aa10.25□□□□□ -0.77
PDLIM3-213ENST00000629667 GAGE5Q13069 117 aa10.25□□□□□ -0.77
PDLIM3-213ENST00000629667 GAGE13Q4V321 117 aa10.25□□□□□ -0.77
PDLIM3-213ENST00000629667 ZNF506Q5JVG8 444 aa10.25□□□□□ -0.77
PDLIM3-213ENST00000629667 C9orf85Q96MD7 179 aa10.25□□□□□ -0.77
PDLIM3-213ENST00000629667 IGKV2D-24A0A075B6R9 120 aa10.24□□□□□ -0.77
PDLIM3-213ENST00000629667 A0A087WWC5 75 aa10.24□□□□□ -0.77
PDLIM3-213ENST00000629667 RNF222A6NCQ9 220 aa10.24□□□□□ -0.77
PDLIM3-213ENST00000629667 TAAR5O14804 337 aa10.24□□□□□ -0.77
PDLIM3-213ENST00000629667 GNG5P63218 68 aa10.24□□□□□ -0.77
PDLIM3-213ENST00000629667 SCGB1C1Q8TD33 95 aa10.24□□□□□ -0.77
PDLIM3-213ENST00000629667 SGK494Q96LW2 274 aa10.24□□□□□ -0.77
PDLIM3-213ENST00000629667 URGCP-MRPS24S4R325 110 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms