RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 PIK3CD-AS1Q5SR53 167 aa6.27□□□□□ -1.41
PKP4-218ENST00000629219 SAPCD1Q5SSQ6 148 aa6.27□□□□□ -1.41
PKP4-218ENST00000629219 COX8CQ7Z4L0 72 aa6.27□□□□□ -1.41
PKP4-218ENST00000629219 TVP23CQ96ET8 276 aa6.27□□□□□ -1.41
PKP4-218ENST00000629219 SDF2L1Q9HCN8 221 aa6.27□□□□□ -1.41
PKP4-218ENST00000629219 MDFICQ9P1T7 246 aa6.27□□□□□ -1.41
PKP4-218ENST00000629219 EPDR1Q9UM22 224 aa6.27□□□□□ -1.41
PKP4-218ENST00000629219 BOLA1Q9Y3E2 137 aa6.27□□□□□ -1.41
PKP4-218ENST00000629219 ICOSQ9Y6W8 199 aa6.27□□□□□ -1.41
PKP4-218ENST00000629219 TRAV8-1A0A0A6YYK1 113 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 A0A0J9YY99 117 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 HMSDA8MTL9 139 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 HMGB3O15347 200 aaKnown RBP6.26□□□□□ -1.41
PKP4-218ENST00000629219 PAX4O43316 350 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 IGLV2-11P01706 119 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 ORM1P02763 201 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 PFN1P07737 140 aaKnown RBP6.26□□□□□ -1.41
PKP4-218ENST00000629219 FHITP49789 147 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 GNG5P63218 68 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 FLI1Q01543 452 aaPredicted RBP6.26□□□□□ -1.41
PKP4-218ENST00000629219 MRPL23Q16540 153 aaKnown RBP6.26□□□□□ -1.41
PKP4-218ENST00000629219 TMEM183BQ1AE95 376 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 ZFP69Q49AA0 526 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 SMUG1Q53HV7 270 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 MUC21Q5SSG8 566 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 AKR1C8PQ5T2L2 129 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 Q6ZQT7 251 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 SH2D6Q7Z4S9 175 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 TMEM183AQ8IXX5 376 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 HIST1H2BAQ96A08 127 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 CYTL1Q9NRR1 136 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 MRPL16Q9NX20 251 aaKnown RBP6.26□□□□□ -1.41
PKP4-218ENST00000629219 PSG8Q9UQ74 426 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 HHLA3Q9XRX5 114 aa6.26□□□□□ -1.41
PKP4-218ENST00000629219 TRBV6-1A0A0K0K1D8 114 aa6.25□□□□□ -1.41
PKP4-218ENST00000629219 EIF3GO75821 320 aaKnown RBP eCLIP6.25□□□□□ -1.41
PKP4-218ENST00000629219 TYMSP04818 313 aa6.25□□□□□ -1.41
PKP4-218ENST00000629219 MED14OSP0DP75 135 aa6.25□□□□□ -1.41
PKP4-218ENST00000629219 PPT1P50897 306 aa6.25□□□□□ -1.41
PKP4-218ENST00000629219 TIRAPP58753 221 aa6.25□□□□□ -1.41
PKP4-218ENST00000629219 SUMO1P63165 101 aaKnown RBP6.25□□□□□ -1.41
PKP4-218ENST00000629219 ZNF726P1Q15940 193 aa6.25□□□□□ -1.41
PKP4-218ENST00000629219 KCNRGQ8N5I3 272 aa6.25□□□□□ -1.41
PKP4-218ENST00000629219 RPH3ALQ9UNE2 315 aa6.25□□□□□ -1.41
PKP4-218ENST00000629219 TRGV4A0A0C4DH28 118 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 A0A0D9SG52 128 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 FAM74A7A6NL05 159 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 UMAD1C9J7I0 102 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 C9JCJ5 164 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 F6UZH7 168 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 ARPC5O15511 151 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 GCGP01275 180 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 SEC11BP0C7V7 166 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 DPPA3Q6W0C5 159 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 STOML3Q8TAV4 291 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 C9orf85Q96MD7 179 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 TXNDC17Q9BRA2 123 aa6.24□□□□□ -1.41
PKP4-218ENST00000629219 MAP1LC3B2A6NCE7 125 aa6.23□□□□□ -1.41
PKP4-218ENST00000629219 PEX7O00628 323 aa6.23□□□□□ -1.41
PKP4-218ENST00000629219 ZNF80P51504 273 aaPredicted RBP6.23□□□□□ -1.41
PKP4-218ENST00000629219 EIF5AP63241 154 aaKnown RBP6.23□□□□□ -1.41
PKP4-218ENST00000629219 DNLZQ5SXM8 178 aa6.23□□□□□ -1.41
PKP4-218ENST00000629219 NEGR1Q7Z3B1 354 aa6.23□□□□□ -1.41
PKP4-218ENST00000629219 OR4C5Q8NGB2 326 aa6.23□□□□□ -1.41
PKP4-218ENST00000629219 PCNPQ8WW12 178 aaKnown RBP6.23□□□□□ -1.41
PKP4-218ENST00000629219 FMC1Q96HJ9 113 aa6.23□□□□□ -1.41
PKP4-218ENST00000629219 ZNF479Q96JC4 524 aa6.23□□□□□ -1.41
PKP4-218ENST00000629219 MAP1LC3BQ9GZQ8 125 aa6.23□□□□□ -1.41
PKP4-218ENST00000629219 NAGKQ9UJ70 344 aa6.23□□□□□ -1.41
PKP4-218ENST00000629219 ZFP30Q9Y2G7 519 aa6.23□□□□□ -1.41
PKP4-218ENST00000629219 LRP1BQ9NZR2 4599 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 K7EQD1 137 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 SIVA1O15304 175 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 GNRH2O43555 120 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 IGHV3-53P01767 116 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 GATA1P15976 413 aaPredicted RBP6.22□□□□□ -1.41
PKP4-218ENST00000629219 SRIP30626 198 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 LGALSLQ3ZCW2 172 aaPredicted RBP6.22□□□□□ -1.41
PKP4-218ENST00000629219 LYPD5Q6UWN5 251 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 PRNTQ86SH4 94 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 Q86TA4 180 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 MBD3L1Q8WWY6 194 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 C8orf49Q96NF6 230 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 KRTAP1-5Q9BYS1 174 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 C11orf21Q9P2W6 132 aa6.22□□□□□ -1.41
PKP4-218ENST00000629219 TRAV9-2A0A087WT02 112 aa6.21□□□□□ -1.42
PKP4-218ENST00000629219 TRBV6-4A0A1B0GX49 114 aa6.21□□□□□ -1.42
PKP4-218ENST00000629219 KANTRA0A1W2PQU2 76 aa6.21□□□□□ -1.42
PKP4-218ENST00000629219 FABP5P3A8MUU1 101 aa6.21□□□□□ -1.42
PKP4-218ENST00000629219 RS1O15537 224 aa6.21□□□□□ -1.42
PKP4-218ENST00000629219 BCL2L11O43521 198 aa6.21□□□□□ -1.42
PKP4-218ENST00000629219 NXPH4O95158 308 aa6.21□□□□□ -1.42
PKP4-218ENST00000629219 IFNA7P01567 189 aa6.21□□□□□ -1.42
PKP4-218ENST00000629219 S100A9P06702 114 aaKnown RBP6.21□□□□□ -1.42
PKP4-218ENST00000629219 RNASE3P12724 160 aaKnown RBP6.21□□□□□ -1.42
PKP4-218ENST00000629219 TNP2Q05952 138 aa6.21□□□□□ -1.42
PKP4-218ENST00000629219 ZFP2Q6ZN57 461 aa6.21□□□□□ -1.42
PKP4-218ENST00000629219 Q6ZRN7 208 aaPredicted RBP6.21□□□□□ -1.42
PKP4-218ENST00000629219 NFE4Q86UQ8 179 aa6.21□□□□□ -1.42
PKP4-218ENST00000629219 IL36BQ9NZH7 164 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms