RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 KIR2DL5BA0A0G2JPC4 375 aa16.53■□□□□ 0.24
PNKP-220ENST00000627232 ZNF688P0C7X2 276 aa16.53■□□□□ 0.24
PNKP-220ENST00000627232 BTF3P20290 206 aaKnown RBP16.53■□□□□ 0.24
PNKP-220ENST00000627232 TFPI2P48307 235 aa16.53■□□□□ 0.24
PNKP-220ENST00000627232 DEFB136Q30KP8 78 aa16.53■□□□□ 0.24
PNKP-220ENST00000627232 PSMG4Q5JS54 123 aa16.53■□□□□ 0.24
PNKP-220ENST00000627232 ADAMTSL5Q6ZMM2 481 aa16.53■□□□□ 0.24
PNKP-220ENST00000627232 FA2HQ7L5A8 372 aa16.53■□□□□ 0.24
PNKP-220ENST00000627232 SMIM15Q7Z3B0 74 aa16.53■□□□□ 0.24
PNKP-220ENST00000627232 KIR2DL5AQ8N109 375 aa16.53■□□□□ 0.24
PNKP-220ENST00000627232 OR11H1Q8NG94 326 aa16.53■□□□□ 0.24
PNKP-220ENST00000627232 OR10AG1Q8NH19 301 aa16.53■□□□□ 0.24
PNKP-220ENST00000627232 A0A0J9YX75 114 aa16.52■□□□□ 0.24
PNKP-220ENST00000627232 LEPP41159 167 aa16.52■□□□□ 0.24
PNKP-220ENST00000627232 EBLN2Q6P2I7 272 aa16.52■□□□□ 0.24
PNKP-220ENST00000627232 AP5S1Q9NUS5 200 aa16.52■□□□□ 0.24
PNKP-220ENST00000627232 TRAV2A0A0B4J234 112 aa16.51■□□□□ 0.23
PNKP-220ENST00000627232 ASIPP42127 132 aa16.51■□□□□ 0.23
PNKP-220ENST00000627232 ANXA2RQ3ZCQ2 193 aa16.51■□□□□ 0.23
PNKP-220ENST00000627232 PDZD2O15018 2839 aa16.51■□□□□ 0.23
PNKP-220ENST00000627232 H3BVH4 76 aa16.5■□□□□ 0.23
PNKP-220ENST00000627232 DUSP14O95147 198 aaKnown RBP16.5■□□□□ 0.23
PNKP-220ENST00000627232 LEPROTL1O95214 131 aa16.5■□□□□ 0.23
PNKP-220ENST00000627232 RNASE1P07998 156 aaKnown RBP16.5■□□□□ 0.23
PNKP-220ENST00000627232 KHDC1LQ5JSQ8 128 aa16.5■□□□□ 0.23
PNKP-220ENST00000627232 KLHL30-AS1Q8NEE0 82 aa16.5■□□□□ 0.23
PNKP-220ENST00000627232 VAMP8Q9BV40 100 aa16.5■□□□□ 0.23
PNKP-220ENST00000627232 SIGLEC8Q9NYZ4 499 aa16.5■□□□□ 0.23
PNKP-220ENST00000627232 PMCHL1Q16048 86 aa16.5■□□□□ 0.23
PNKP-220ENST00000627232 SPANXN1Q5VSR9 72 aa16.5■□□□□ 0.23
PNKP-220ENST00000627232 OR9G4Q8NGQ1 327 aa16.5■□□□□ 0.23
PNKP-220ENST00000627232 C20orf144Q9BQM9 153 aa16.5■□□□□ 0.23
PNKP-220ENST00000627232 C16orf95Q9H693 158 aa16.5■□□□□ 0.23
PNKP-220ENST00000627232 NPYP01303 97 aa16.49■□□□□ 0.23
PNKP-220ENST00000627232 TMEM70Q9BUB7 260 aa16.49■□□□□ 0.23
PNKP-220ENST00000627232 TCF21O43680 179 aa16.48■□□□□ 0.23
PNKP-220ENST00000627232 IFI27P40305 119 aaPredicted RBP16.48■□□□□ 0.23
PNKP-220ENST00000627232 KIR3DS1Q14943 382 aa16.48■□□□□ 0.23
PNKP-220ENST00000627232 FOXI2Q6ZQN5 318 aa16.48■□□□□ 0.23
PNKP-220ENST00000627232 SCRT2Q9NQ03 307 aa16.48■□□□□ 0.23
PNKP-220ENST00000627232 HSPB8Q9UJY1 196 aa16.48■□□□□ 0.23
PNKP-220ENST00000627232 CRXO43186 299 aaPredicted RBP16.47■□□□□ 0.23
PNKP-220ENST00000627232 S100A4P26447 101 aaKnown RBP16.47■□□□□ 0.23
PNKP-220ENST00000627232 DEFA6Q01524 100 aa16.47■□□□□ 0.23
PNKP-220ENST00000627232 MXRA5Q9NR99 2828 aa16.46■□□□□ 0.23
PNKP-220ENST00000627232 C7orf71A4D174 169 aa16.46■□□□□ 0.23
PNKP-220ENST00000627232 SMKR1H3BMG3 65 aa16.46■□□□□ 0.23
PNKP-220ENST00000627232 EVI2AP22794 236 aa16.46■□□□□ 0.23
PNKP-220ENST00000627232 TSPOP30536 169 aa16.46■□□□□ 0.23
PNKP-220ENST00000627232 DLX4Q92988 240 aaPredicted RBP16.46■□□□□ 0.23
PNKP-220ENST00000627232 MAP1LC3AQ9H492 121 aa16.46■□□□□ 0.23
PNKP-220ENST00000627232 LOC389332A0A1B0GUA5 103 aa16.45■□□□□ 0.22
PNKP-220ENST00000627232 NCR2O95944 276 aa16.45■□□□□ 0.22
PNKP-220ENST00000627232 TDRG1Q3Y452 100 aa16.45■□□□□ 0.22
PNKP-220ENST00000627232 ZNF418Q8TF45 676 aaPredicted RBP16.45■□□□□ 0.22
PNKP-220ENST00000627232 CTAG1AP78358 180 aa16.45■□□□□ 0.22
PNKP-220ENST00000627232 FAM159AQ6UWV7 190 aa16.45■□□□□ 0.22
PNKP-220ENST00000627232 NDUFAF3Q9BU61 184 aa16.45■□□□□ 0.22
PNKP-220ENST00000627232 LINC01546A6NGU7 62 aa16.44■□□□□ 0.22
PNKP-220ENST00000627232 SYS1-DBNDD2H3BUS1 97 aa16.44■□□□□ 0.22
PNKP-220ENST00000627232 TNFRSF6BO95407 300 aa16.44■□□□□ 0.22
PNKP-220ENST00000627232 DUX3Q96PT4 197 aa16.44■□□□□ 0.22
PNKP-220ENST00000627232 MAP1LC3CQ9BXW4 147 aa16.44■□□□□ 0.22
PNKP-220ENST00000627232 PHLDA3Q9Y5J5 127 aa16.44■□□□□ 0.22
PNKP-220ENST00000627232 GNRH2O43555 120 aa16.43■□□□□ 0.22
PNKP-220ENST00000627232 RNASE3P12724 160 aaKnown RBP16.43■□□□□ 0.22
PNKP-220ENST00000627232 NXT2Q9NPJ8 142 aaKnown RBP16.43■□□□□ 0.22
PNKP-220ENST00000627232 PAM16Q9Y3D7 125 aa16.43■□□□□ 0.22
PNKP-220ENST00000627232 C20orf202A1L168 122 aa16.42■□□□□ 0.22
PNKP-220ENST00000627232 PRSS47A8MTI9 375 aa16.42■□□□□ 0.22
PNKP-220ENST00000627232 NXPH4O95158 308 aa16.42■□□□□ 0.22
PNKP-220ENST00000627232 HILS1P60008 231 aa16.42■□□□□ 0.22
PNKP-220ENST00000627232 FHL3Q13643 280 aa16.42■□□□□ 0.22
PNKP-220ENST00000627232 PET117Q6UWS5 81 aa16.42■□□□□ 0.22
PNKP-220ENST00000627232 LINC00173Q6ZV60 143 aa16.42■□□□□ 0.22
PNKP-220ENST00000627232 DEFB125Q8N687 156 aa16.42■□□□□ 0.22
PNKP-220ENST00000627232 MRAP2Q96G30 205 aa16.42■□□□□ 0.22
PNKP-220ENST00000627232 TIMM8BQ9Y5J9 83 aaPredicted RBP16.42■□□□□ 0.22
PNKP-220ENST00000627232 CDKN1BP46527 198 aa16.41■□□□□ 0.22
PNKP-220ENST00000627232 LINC01006Q8NI28 216 aa16.41■□□□□ 0.22
PNKP-220ENST00000627232 DYNLRB2Q8TF09 96 aa16.41■□□□□ 0.22
PNKP-220ENST00000627232 C14orf144Q96I85 54 aa16.41■□□□□ 0.22
PNKP-220ENST00000627232 FLNAP21333 2647 aaKnown RBP16.41■□□□□ 0.22
PNKP-220ENST00000627232 TRAV12-3A0A0B4J271 114 aa16.4■□□□□ 0.22
PNKP-220ENST00000627232 A8MTW9 85 aa16.4■□□□□ 0.22
PNKP-220ENST00000627232 CD28P10747 220 aa16.4■□□□□ 0.22
PNKP-220ENST00000627232 AMTNQ6UX39 209 aa16.4■□□□□ 0.22
PNKP-220ENST00000627232 RAX2Q96IS3 184 aa16.4■□□□□ 0.22
PNKP-220ENST00000627232 ZNF747Q9BV97 191 aa16.4■□□□□ 0.22
PNKP-220ENST00000627232 A0A096LNJ9 63 aa16.4■□□□□ 0.22
PNKP-220ENST00000627232 DEFB114Q30KQ6 69 aa16.4■□□□□ 0.22
PNKP-220ENST00000627232 TMEM61Q8N0U2 210 aa16.4■□□□□ 0.22
PNKP-220ENST00000627232 OR2K2Q8NGT1 345 aa16.4■□□□□ 0.22
PNKP-220ENST00000627232 DPH3P1Q9H4G8 78 aa16.4■□□□□ 0.22
PNKP-220ENST00000627232 TSSC4Q9Y5U2 329 aaPredicted RBP16.4■□□□□ 0.22
PNKP-220ENST00000627232 HELZ2Q9BYK8 2649 aaKnown RBP16.39■□□□□ 0.21
PNKP-220ENST00000627232 M0R381 172 aa16.39■□□□□ 0.21
PNKP-220ENST00000627232 GAS8-AS1O95177 125 aa16.39■□□□□ 0.21
PNKP-220ENST00000627232 HBDP02042 147 aa16.39■□□□□ 0.21
PNKP-220ENST00000627232 SPATA45Q537H7 98 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms