RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 CTSGP08311 255 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 ZFP36P26651 326 aaKnown RBP5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 PSG9Q00887 426 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 SAMD13Q5VXD3 122 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 Q8N9W7 124 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 AP1S3Q96PC3 154 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 LINC00527Q9UJ94 153 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 H3BS24 57 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 RS1O15537 224 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 CKS2P33552 79 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 OR4C5Q8NGB2 326 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 RABAC1Q9UI14 185 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 SELENOKQ9Y6D0 94 aa5.56□□□□□ -1.52
CTNNA1-244ENST00000627109 IGHV2-70DA0A0C4DH43 119 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 TMEM213A2RRL7 107 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 RBAKDNA6NC62 111 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 SYS1-DBNDD2H3BUS1 97 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 RPL7P18124 248 aaKnown RBP5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 SLC25A34Q6PIV7 304 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 LYZL1Q6UWQ5 148 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 C18orf15Q96N68 181 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 UFC1Q9Y3C8 167 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 TNFRSF18Q9Y5U5 241 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 SMKR1H3BMG3 65 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 NCR2O95944 276 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 UBE2E1P51965 193 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 AMN1Q8IY45 258 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 ZNF738Q8NE65 137 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 ZNF502Q8TBZ5 544 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 CSMD2Q7Z408 3487 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 IGHV4-30-2A0A087WSY4 118 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 D6R8Y8 96 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 G3V4G9 280 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 IGLC6P0CF74 106 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 HLA-DMBP28068 263 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 MPV17L2Q567V2 206 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 OR10AG1Q8NH19 301 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 PRELID3AQ96N28 172 aa5.55□□□□□ -1.52
CTNNA1-244ENST00000627109 FAM106CPP0CH98 169 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 CLEC19AQ6UXS0 136 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 BAALCQ8WXS3 180 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 U3KQE9 123 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 NOTCH3Q9UM47 2321 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 FBN2P35556 2912 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 F5H697 171 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 IFI27P40305 119 aaPredicted RBP5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 ST20Q9HBF5 79 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 CLPSL1A2RUU4 121 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 SH2D1AO60880 128 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 C15orf32Q32M92 178 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 LINC01545Q5VT33 79 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 SIGMAR1Q99720 223 aa5.54□□□□□ -1.52
CTNNA1-244ENST00000627109 A0A096LNJ9 63 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 NMUP48645 174 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 LMO4P61968 165 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 TMEM219Q86XT9 240 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 LRRC75A-AS1Q8N1F1 130 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 DEFB125Q8N687 156 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 PRR25Q96S07 402 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 HIVEP1P15822 2718 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 PRSS1P07477 247 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 RHOGP84095 191 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 ERCC8Q13216 396 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 RNF182Q8N6D2 247 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 EVI2AP22794 236 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 FER1L6-AS1Q8NA97 138 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 EEF1AKMT3Q96AZ1 226 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 NBPF19A0A087WUL8 3843 aa5.53□□□□□ -1.52
CTNNA1-244ENST00000627109 G3V318 75 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 EMP1P54849 157 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 RPS20P60866 119 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 SMAGPQ0VAQ4 97 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 ORMDL3Q8N138 153 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 IL17DQ8TAD2 202 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 VGLL1Q99990 258 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 IGHV4-61A0A0C4DH41 118 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 RIPPLY3P57055 190 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 CACNG7P62955 275 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 SCRT2Q9NQ03 307 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 NIPBLQ6KC79 2804 aaeCLIP5.52□□□□□ -1.532e-7■■■■□ 20.4
CTNNA1-244ENST00000627109 PRSS29PA6NIE9 313 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 CYSRT1A8MQ03 144 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 BUB3O43684 328 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 LY6EQ16553 131 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 FAM104BQ5XKR9 115 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 MS4A6AQ9H2W1 248 aa5.52□□□□□ -1.53
CTNNA1-244ENST00000627109 CKS1BP61024 79 aa5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 SMR3AQ99954 134 aa5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 ZNF747Q9BV97 191 aa5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 CENPVL3A0A0U1RRI6 287 aa5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 GAGE10A6NGK3 116 aa5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 S100A4P26447 101 aaKnown RBP5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 FAM106AQ4KMX7 169 aa5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 ORAOV1Q8WV07 137 aa5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 RAB37Q96AX2 223 aa5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 ZNF80P51504 273 aaPredicted RBP5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 TMEM78Q5T7P6 136 aa5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 C5orf56Q8N8D9 126 aa5.51□□□□□ -1.53
CTNNA1-244ENST00000627109 PIFOQ8TCI5 191 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms