RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 OR2T35Q8NGX2 323 aa7.46□□□□□ -1.22
SSBP4-215ENST00000625926 ZNF479Q96JC4 524 aa7.46□□□□□ -1.22
SSBP4-215ENST00000625926 KCNS1Q96KK3 526 aa7.46□□□□□ -1.22
SSBP4-215ENST00000625926 SGK494Q96LW2 274 aa7.46□□□□□ -1.22
SSBP4-215ENST00000625926 KRTAP1-5Q9BYS1 174 aa7.46□□□□□ -1.22
SSBP4-215ENST00000625926 SDF2L1Q9HCN8 221 aa7.46□□□□□ -1.22
SSBP4-215ENST00000625926 M0R2P5 195 aa7.45□□□□□ -1.22
SSBP4-215ENST00000625926 SIVA1O15304 175 aa7.45□□□□□ -1.22
SSBP4-215ENST00000625926 SFTA3P0C7M3 94 aa7.45□□□□□ -1.22
SSBP4-215ENST00000625926 LYPD5Q6UWN5 251 aa7.45□□□□□ -1.22
SSBP4-215ENST00000625926 NEGR1Q7Z3B1 354 aa7.45□□□□□ -1.22
SSBP4-215ENST00000625926 ZNF575Q86XF7 245 aa7.45□□□□□ -1.22
SSBP4-215ENST00000625926 EPDR1Q9UM22 224 aa7.45□□□□□ -1.22
SSBP4-215ENST00000625926 PSG8Q9UQ74 426 aa7.45□□□□□ -1.22
SSBP4-215ENST00000625926 DNAH2Q9P225 4427 aa7.44□□□□□ -1.22
SSBP4-215ENST00000625926 TRAV4A0A0B4J268 109 aa7.44□□□□□ -1.22
SSBP4-215ENST00000625926 A0A1W2PRE2 83 aa7.44□□□□□ -1.22
SSBP4-215ENST00000625926 FBLL1A6NHQ2 334 aaKnown RBP7.44□□□□□ -1.22
SSBP4-215ENST00000625926 TAAR5O14804 337 aa7.44□□□□□ -1.22
SSBP4-215ENST00000625926 NXPH4O95158 308 aa7.44□□□□□ -1.22
SSBP4-215ENST00000625926 ORM1P02763 201 aa7.44□□□□□ -1.22
SSBP4-215ENST00000625926 TYMSP04818 313 aa7.44□□□□□ -1.22
SSBP4-215ENST00000625926 SRIP30626 198 aa7.44□□□□□ -1.22
SSBP4-215ENST00000625926 FLI1Q01543 452 aaPredicted RBP7.44□□□□□ -1.22
SSBP4-215ENST00000625926 SAPCD1Q5SSQ6 148 aa7.44□□□□□ -1.22
SSBP4-215ENST00000625926 CYB561D1Q8N8Q1 229 aa7.44□□□□□ -1.22
SSBP4-215ENST00000625926 OR4C5Q8NGB2 326 aa7.44□□□□□ -1.22
SSBP4-215ENST00000625926 PCNPQ8WW12 178 aaKnown RBP7.44□□□□□ -1.22
SSBP4-215ENST00000625926 CTXND1A0A1B0GTU2 59 aa7.43□□□□□ -1.22
SSBP4-215ENST00000625926 C16orf90A8MZG2 172 aa7.43□□□□□ -1.22
SSBP4-215ENST00000625926 GGTLC3B5MD39 225 aa7.43□□□□□ -1.22
SSBP4-215ENST00000625926 K7EQD1 137 aa7.43□□□□□ -1.22
SSBP4-215ENST00000625926 GCGP01275 180 aa7.43□□□□□ -1.22
SSBP4-215ENST00000625926 IGLV2-11P01706 119 aa7.43□□□□□ -1.22
SSBP4-215ENST00000625926 PFN1P07737 140 aaKnown RBP7.43□□□□□ -1.22
SSBP4-215ENST00000625926 GYPEP15421 78 aa7.43□□□□□ -1.22
SSBP4-215ENST00000625926 ZNF80P51504 273 aaPredicted RBP7.43□□□□□ -1.22
SSBP4-215ENST00000625926 ZFP69Q49AA0 526 aa7.43□□□□□ -1.22
SSBP4-215ENST00000625926 PRNTQ86SH4 94 aa7.43□□□□□ -1.22
SSBP4-215ENST00000625926 TMEM75Q8N9X5 138 aa7.43□□□□□ -1.22
SSBP4-215ENST00000625926 DNAH17Q9UFH2 4485 aa7.43□□□□□ -1.22
SSBP4-215ENST00000625926 FAT2Q9NYQ8 4349 aa7.42□□□□□ -1.22
SSBP4-215ENST00000625926 C9JCJ5 164 aa7.42□□□□□ -1.22
SSBP4-215ENST00000625926 ARPC5O15511 151 aa7.42□□□□□ -1.22
SSBP4-215ENST00000625926 IFNA7P01567 189 aa7.42□□□□□ -1.22
SSBP4-215ENST00000625926 ZNF726P1Q15940 193 aa7.42□□□□□ -1.22
SSBP4-215ENST00000625926 SMUG1Q53HV7 270 aa7.42□□□□□ -1.22
SSBP4-215ENST00000625926 AKR1C8PQ5T2L2 129 aa7.42□□□□□ -1.22
SSBP4-215ENST00000625926 NKX6-2Q9C056 277 aaPredicted RBP7.42□□□□□ -1.22
SSBP4-215ENST00000625926 TRAV9-2A0A087WT02 112 aa7.41□□□□□ -1.22
SSBP4-215ENST00000625926 G3V3Q6 166 aa7.41□□□□□ -1.22
SSBP4-215ENST00000625926 PPT1P50897 306 aa7.41□□□□□ -1.22
SSBP4-215ENST00000625926 LINC00315P59091 139 aa7.41□□□□□ -1.22
SSBP4-215ENST00000625926 ZNF876PQ49A33 203 aa7.41□□□□□ -1.22
SSBP4-215ENST00000625926 LINC00479Q96M42 142 aa7.41□□□□□ -1.22
SSBP4-215ENST00000625926 TXNDC17Q9BRA2 123 aa7.41□□□□□ -1.22
SSBP4-215ENST00000625926 C11orf21Q9P2W6 132 aa7.41□□□□□ -1.22
SSBP4-215ENST00000625926 CIDEAO60543 219 aa7.4□□□□□ -1.22
SSBP4-215ENST00000625926 FGF8P55075 233 aaPredicted RBP7.4□□□□□ -1.22
SSBP4-215ENST00000625926 UBE2G2P60604 165 aa7.4□□□□□ -1.22
SSBP4-215ENST00000625926 SH2D6Q7Z4S9 175 aa7.4□□□□□ -1.22
SSBP4-215ENST00000625926 SPATA12Q7Z6I5 190 aa7.4□□□□□ -1.22
SSBP4-215ENST00000625926 HIST1H2BAQ96A08 127 aa7.4□□□□□ -1.22
SSBP4-215ENST00000625926 CYTL1Q9NRR1 136 aa7.4□□□□□ -1.22
SSBP4-215ENST00000625926 LY96Q9Y6Y9 160 aa7.4□□□□□ -1.22
SSBP4-215ENST00000625926 TRAV34A0A0B4J273 112 aa7.39□□□□□ -1.23
SSBP4-215ENST00000625926 FAM74A7A6NL05 159 aa7.39□□□□□ -1.23
SSBP4-215ENST00000625926 FABP5P3A8MUU1 101 aa7.39□□□□□ -1.23
SSBP4-215ENST00000625926 K7EP13 123 aa7.39□□□□□ -1.23
SSBP4-215ENST00000625926 RS1O15537 224 aa7.39□□□□□ -1.23
SSBP4-215ENST00000625926 GATA1P15976 413 aaPredicted RBP7.39□□□□□ -1.23
SSBP4-215ENST00000625926 CFAP126Q5VTH2 177 aa7.39□□□□□ -1.23
SSBP4-215ENST00000625926 PTH2Q96A98 100 aa7.39□□□□□ -1.23
SSBP4-215ENST00000625926 C9orf85Q96MD7 179 aa7.39□□□□□ -1.23
SSBP4-215ENST00000625926 ARL2-SNX15V9GYD0 113 aa7.39□□□□□ -1.23
SSBP4-215ENST00000625926 LOC100131303A0A0U1RQF7 123 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 TRBV6-4A0A1B0GX49 114 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 MAP1LC3B2A6NCE7 125 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 SMLR1H3BR10 107 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 PEX7O00628 323 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 RNASE3P12724 160 aaKnown RBP7.38□□□□□ -1.23
SSBP4-215ENST00000625926 EVI2AP22794 236 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
SSBP4-215ENST00000625926 NFE4Q86UQ8 179 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 WFDC10BQ8IUB3 73 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 NHLRC2Q8NBF2 726 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 STOML3Q8TAV4 291 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 PRADC1Q9BSG0 188 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 MAP1LC3BQ9GZQ8 125 aa7.38□□□□□ -1.23
SSBP4-215ENST00000625926 PKHD1P08F94 4074 aa7.37□□□□□ -1.23
SSBP4-215ENST00000625926 NACAE9PAV3 2078 aa7.37□□□□□ -1.23
SSBP4-215ENST00000625926 IGKV3D-20A0A0C4DH25 116 aa7.37□□□□□ -1.23
SSBP4-215ENST00000625926 PGPEP1LA6NFU8 196 aa7.37□□□□□ -1.23
SSBP4-215ENST00000625926 CDK2AP2O75956 126 aa7.37□□□□□ -1.23
SSBP4-215ENST00000625926 DNAH10OSP0CZ25 163 aa7.37□□□□□ -1.23
SSBP4-215ENST00000625926 S100A4P26447 101 aaKnown RBP7.37□□□□□ -1.23
SSBP4-215ENST00000625926 TIRAPP58753 221 aa7.37□□□□□ -1.23
SSBP4-215ENST00000625926 ZNF345Q14585 488 aa7.37□□□□□ -1.23
SSBP4-215ENST00000625926 ZNF506Q5JVG8 444 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms