RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 MT-ATP8P03928 68 aa10.83□□□□□ -0.68
LDB3-209ENST00000623056 Q6ZQT7 251 aa10.83□□□□□ -0.68
LDB3-209ENST00000623056 NEXN-AS1Q8NBZ9 246 aa10.83□□□□□ -0.68
LDB3-209ENST00000623056 IGHV4-4A0A075B6R2 117 aa10.82□□□□□ -0.68
LDB3-209ENST00000623056 PSMB2P49721 201 aa10.82□□□□□ -0.68
LDB3-209ENST00000623056 SFTA2Q6UW10 78 aa10.82□□□□□ -0.68
LDB3-209ENST00000623056 GLMPQ8WWB7 406 aa10.82□□□□□ -0.68
LDB3-209ENST00000623056 PRADC1Q9BSG0 188 aa10.82□□□□□ -0.68
LDB3-209ENST00000623056 TSPAN13O95857 204 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 TOMM6Q96B49 74 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 SH3BGRL2Q9UJC5 107 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 WNK2Q9Y3S1 2297 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 IGHV3-66A0A0C4DH42 116 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 LOC107984156A0A0G2JMH3 177 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 TMEM238LA0A1B0GVL6 79 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 A6NJY4 79 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 ZNF815PA8K554 130 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 BUB3O43684 328 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 UBE2D1P51668 147 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 ORMDL2Q53FV1 153 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 ZFP2Q6ZN57 461 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 ARL17AQ8IVW1 177 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 OR11H6Q8NGC7 330 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 PLEKHB2Q96CS7 222 aa10.81□□□□□ -0.68
LDB3-209ENST00000623056 XGP55808 180 aa10.8□□□□□ -0.68
LDB3-209ENST00000623056 Q6ZUT4 128 aa10.8□□□□□ -0.68
LDB3-209ENST00000623056 PTH2Q96A98 100 aa10.8□□□□□ -0.68
LDB3-209ENST00000623056 SLC50A1Q9BRV3 221 aa10.8□□□□□ -0.68
LDB3-209ENST00000623056 POLEQ07864 2286 aa10.8□□□□□ -0.68
LDB3-209ENST00000623056 H3BVH4 76 aa10.8□□□□□ -0.68
LDB3-209ENST00000623056 SLC25A16P16260 332 aa10.8□□□□□ -0.68
LDB3-209ENST00000623056 LY6G5BQ8NDX9 201 aa10.8□□□□□ -0.68
LDB3-209ENST00000623056 VKORC1Q9BQB6 163 aa10.8□□□□□ -0.68
LDB3-209ENST00000623056 MSRB2Q9Y3D2 182 aa10.8□□□□□ -0.68
LDB3-209ENST00000623056 ARHGAP32A7KAX9 2087 aa10.8□□□□□ -0.68
LDB3-209ENST00000623056 SCGB1D4Q6XE38 83 aa10.79□□□□□ -0.68
LDB3-209ENST00000623056 BAALCQ8WXS3 180 aa10.79□□□□□ -0.68
LDB3-209ENST00000623056 CARD19Q96LW7 228 aa10.79□□□□□ -0.68
LDB3-209ENST00000623056 ZFAND3Q9H8U3 227 aa10.79□□□□□ -0.68
LDB3-209ENST00000623056 TRAV8-2A0A0B4J237 113 aa10.79□□□□□ -0.68
LDB3-209ENST00000623056 B9A039 149 aa10.79□□□□□ -0.68
LDB3-209ENST00000623056 UBE2D3P61077 147 aa10.79□□□□□ -0.68
LDB3-209ENST00000623056 UBE2D2P62837 147 aa10.79□□□□□ -0.68
LDB3-209ENST00000623056 SRSF9Q13242 221 aaKnown RBP eCLIP10.79□□□□□ -0.68
LDB3-209ENST00000623056 IGHV3OR16-13A0A075B7E8 117 aa10.78□□□□□ -0.68
LDB3-209ENST00000623056 IGHV3-74A0A0B4J1X5 117 aa10.78□□□□□ -0.68
LDB3-209ENST00000623056 COX6B1P14854 86 aa10.78□□□□□ -0.68
LDB3-209ENST00000623056 SUMO2P61956 95 aaKnown RBP10.78□□□□□ -0.68
LDB3-209ENST00000623056 RASL10AQ92737 203 aa10.78□□□□□ -0.68
LDB3-209ENST00000623056 PRSS29PA6NIE9 313 aa10.78□□□□□ -0.68
LDB3-209ENST00000623056 LINC01548A6NM66 108 aa10.78□□□□□ -0.68
LDB3-209ENST00000623056 PPDPFLQ8WWR9 84 aa10.78□□□□□ -0.68
LDB3-209ENST00000623056 ODF3BA8MYP8 253 aa10.77□□□□□ -0.69
LDB3-209ENST00000623056 CD7P09564 240 aa10.77□□□□□ -0.69
LDB3-209ENST00000623056 C2orf66Q6UXQ4 117 aa10.77□□□□□ -0.69
LDB3-209ENST00000623056 RPL39LQ96EH5 51 aaKnown RBP10.77□□□□□ -0.69
LDB3-209ENST00000623056 IGF2RP11717 2491 aa10.77□□□□□ -0.69
LDB3-209ENST00000623056 CLPSL1A2RUU4 121 aa10.76□□□□□ -0.69
LDB3-209ENST00000623056 C15orf32Q32M92 178 aa10.76□□□□□ -0.69
LDB3-209ENST00000623056 TEN1Q86WV5 123 aa10.76□□□□□ -0.69
LDB3-209ENST00000623056 CLEC3BP05452 202 aa10.76□□□□□ -0.69
LDB3-209ENST00000623056 C9orf47Q6ZRZ4 202 aa10.76□□□□□ -0.69
LDB3-209ENST00000623056 KLHL30-AS1Q8NEE0 82 aa10.76□□□□□ -0.69
LDB3-209ENST00000623056 IGHV7-81A0A0B4J1V7 117 aa10.75□□□□□ -0.69
LDB3-209ENST00000623056 SPRY2O43597 315 aa10.75□□□□□ -0.69
LDB3-209ENST00000623056 PRR9Q5T870 116 aa10.75□□□□□ -0.69
LDB3-209ENST00000623056 LYRM7Q5U5X0 104 aa10.75□□□□□ -0.69
LDB3-209ENST00000623056 Q8N6K4 173 aa10.75□□□□□ -0.69
LDB3-209ENST00000623056 IGHV3-49A0A0A0MS15 119 aa10.75□□□□□ -0.69
LDB3-209ENST00000623056 RNF223E7ERA6 249 aa10.75□□□□□ -0.69
LDB3-209ENST00000623056 TCL1BO95988 128 aa10.75□□□□□ -0.69
LDB3-209ENST00000623056 PRR30Q53SZ7 412 aaPredicted RBP10.75□□□□□ -0.69
LDB3-209ENST00000623056 NDUFA11Q86Y39 141 aa10.75□□□□□ -0.69
LDB3-209ENST00000623056 Q8NA96 180 aa10.75□□□□□ -0.69
LDB3-209ENST00000623056 M0R381 172 aa10.74□□□□□ -0.69
LDB3-209ENST00000623056 MRPL53Q96EL3 112 aaKnown RBP10.74□□□□□ -0.69
LDB3-209ENST00000623056 HIF1ANQ9NWT6 349 aa10.74□□□□□ -0.69
LDB3-209ENST00000623056 ERG28Q9UKR5 140 aa10.74□□□□□ -0.69
LDB3-209ENST00000623056 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.74□□□□□ -0.69
LDB3-209ENST00000623056 CD3EP07766 207 aa10.74□□□□□ -0.69
LDB3-209ENST00000623056 RNF183Q96D59 192 aa10.74□□□□□ -0.69
LDB3-209ENST00000623056 PTPRQQ9UMZ3 2332 aa10.74□□□□□ -0.69
LDB3-209ENST00000623056 PRTN3P24158 256 aa10.73□□□□□ -0.69
LDB3-209ENST00000623056 SBSPONQ8IVN8 264 aa10.73□□□□□ -0.69
LDB3-209ENST00000623056 NCOR2Q9Y618 2525 aa10.73□□□□□ -0.69
LDB3-209ENST00000623056 A0A0J9YY99 117 aa10.73□□□□□ -0.69
LDB3-209ENST00000623056 CENPVL3A0A0U1RRI6 287 aa10.73□□□□□ -0.69
LDB3-209ENST00000623056 J3KRW8 73 aa10.73□□□□□ -0.69
LDB3-209ENST00000623056 K7ENP7 123 aa10.73□□□□□ -0.69
LDB3-209ENST00000623056 IGF1P05019 195 aa10.73□□□□□ -0.69
LDB3-209ENST00000623056 C14orf178Q8N769 122 aaPredicted RBP10.73□□□□□ -0.69
LDB3-209ENST00000623056 DPH3P1Q9H4G8 78 aa10.73□□□□□ -0.69
LDB3-209ENST00000623056 TRBV20-1A0A075B6N2 111 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 A8MWV9 139 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 M0R1W7 72 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 CRYGDP07320 174 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 GATA3P23771 443 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 ECSCRQ19T08 205 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 VMO1Q7Z5L0 202 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 FAM110DQ8TAY7 271 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms