RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	ODF3	Q96PU9	254 aa		4.16	□□□□□ -1.74
LINC00963-215	ENST00000622972	ATG101	Q9BSB4	218 aa		4.16	□□□□□ -1.74
LINC00963-215	ENST00000622972	TMEM167B	Q9NRX6	74 aa		4.16	□□□□□ -1.74
LINC00963-215	ENST00000622972	FAM30A	Q9NZY2	134 aa		4.16	□□□□□ -1.74
LINC00963-215	ENST00000622972	TP53TG3	Q9ULZ0	132 aa		4.16	□□□□□ -1.74
LINC00963-215	ENST00000622972	EPDR1	Q9UM22	224 aa		4.16	□□□□□ -1.74
LINC00963-215	ENST00000622972	PRELID1	Q9Y255	219 aa		4.16	□□□□□ -1.74
LINC00963-215	ENST00000622972	FRAS1	Q86XX4	4008 aa		4.16	□□□□□ -1.74
LINC00963-215	ENST00000622972	TRAV12-3	A0A0B4J271	114 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	KRTAP4-8	A0A0G2JLE6	195 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	RBAKDN	A6NC62	111 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	PEX7	O00628	323 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	INS	P01308	110 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	IGLV2-8	P01709	118 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	DEFB130B	P0DP73	79 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	DEFB130A	P0DP74	79 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	HTN1	P15515	57 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	MAL	P21145	153 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	CRIP1	P50238	77 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	ZNF138	P52744	262 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	EIF5A	P63241	154 aa	Known RBP	4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	SOHLH1	Q5JUK2	328 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	C11orf72	Q8NBR9	251 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	OR10J6P	Q8NGY7	276 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	C11orf52	Q96A22	123 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	FAM210B	Q96KR6	192 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	AAMDC	Q9H7C9	122 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	GNG13	Q9P2W3	67 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	DKK2	Q9UBU2	259 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	RNF24	Q9Y225	148 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	KLF12	Q9Y4X4	402 aa		4.15	□□□□□ -1.75
LINC00963-215	ENST00000622972	C7orf71	A4D174	169 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	PGPEP1L	A6NFU8	196 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	BCL2	P10415	239 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	CDKN1B	P46527	198 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	RAB5C	P51148	216 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	TMEM88	Q6PEY1	159 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	ARL6IP6	Q8N6S5	226 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	CYB561D1	Q8N8Q1	229 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	NHLRC2	Q8NBF2	726 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	RNASE8	Q8TDE3	154 aa	Known RBP	4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	ZC2HC1A	Q96GY0	325 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	LINC00477	Q96M19	166 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	LINC01587	Q99440	93 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	MLST8	Q9BVC4	326 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	PSG8	Q9UQ74	426 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	ARL2-SNX15	V9GYD0	113 aa		4.14	□□□□□ -1.75
LINC00963-215	ENST00000622972	DNAH10	Q8IVF4	4471 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	EPPK1	P58107	5090 aa	Known RBP	4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	DNAH2	Q9P225	4427 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	TRBV6-1	A0A0K0K1D8	114 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	GAGE12B	A1L429	117 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	RAB19	A4D1S5	217 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	GAGE12H	A6NDE8	117 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972		F5H768	121 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	NUDT3	O95989	172 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	RNASE4	P34096	147 aa	Known RBP	4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	FLI1	Q01543	452 aa	Predicted RBP	4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	LGALS9B	Q3B8N2	356 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	MUC21	Q5SSG8	566 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	LCE1D	Q5T752	114 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	CST9LP1	Q5W188	147 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972		Q6AWC8	147 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	PRNT	Q86SH4	94 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	C15orf53	Q8NAA6	179 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	RXFP4	Q8TDU9	374 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	BIRC6	Q9NR09	4857 aa		4.13	□□□□□ -1.75
LINC00963-215	ENST00000622972	DNAH17	Q9UFH2	4485 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	IGKV3D-20	A0A0C4DH25	116 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	TRBV7-9	A0A0J9YWB2	115 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	LYRM9	A8MSI8	78 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972		K7EN84	100 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	LTA	P01374	205 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	IFNA7	P01567	189 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	ATP5G1	P05496	136 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	GCSH	P23434	173 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	LEP	P41159	167 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	RPL35	P42766	123 aa	Known RBP	4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	MEF2B	Q02080	365 aa	Predicted RBP	4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	TMEM183B	Q1AE95	376 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	RNF212	Q495C1	297 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	ZNF506	Q5JVG8	444 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	TMEM78	Q5T7P6	136 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	C1orf134	Q5TEV5	83 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	EIF5AL1	Q6IS14	154 aa	Known RBP	4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	COX8C	Q7Z4L0	72 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	LINC00612	Q8N6U2	182 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	CMTM2	Q8TAZ6	248 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	FAM210A	Q96ND0	272 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	KRTAP17-1	Q9BYP8	105 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	TREM1	Q9NP99	234 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	MANBAL	Q9NQG1	85 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	MDFIC	Q9P1T7	246 aa		4.12	□□□□□ -1.75
LINC00963-215	ENST00000622972	IGHV3-16	A0A0C4DH30	117 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	RBFOX3	A6NFN3	312 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	RTL8C	O15255	209 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	GNRH2	O43555	120 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	GCG	P01275	180 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	TYMS	P04818	313 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms