RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 COX8AP10176 69 aa10.02□□□□□ -0.81
MSH6-215ENST00000622629 CENPVL3A0A0U1RRI6 287 aa10.01□□□□□ -0.81
MSH6-215ENST00000622629 MBD6Q96DN6 1003 aa10.01□□□□□ -0.81
MSH6-215ENST00000622629 MLST8Q9BVC4 326 aa10.01□□□□□ -0.81
MSH6-215ENST00000622629 MSMBP08118 114 aa10.01□□□□□ -0.81
MSH6-215ENST00000622629 ZNF418Q8TF45 676 aaPredicted RBP10.01□□□□□ -0.81
MSH6-215ENST00000622629 IGHV3-64A0A075B6Q5 118 aa10.01□□□□□ -0.81
MSH6-215ENST00000622629 A0A1B0GWB2 263 aa10.01□□□□□ -0.81
MSH6-215ENST00000622629 GAGE12BA1L429 117 aa10.01□□□□□ -0.81
MSH6-215ENST00000622629 IGHV3-73A0A0B4J1V6 119 aa10.01□□□□□ -0.81
MSH6-215ENST00000622629 CFHR4Q92496 578 aa10.01□□□□□ -0.81
MSH6-215ENST00000622629 GEMIN7Q9H840 131 aaKnown RBP10.01□□□□□ -0.81
MSH6-215ENST00000622629 SYNJ2BPP57105 145 aa10□□□□□ -0.81
MSH6-215ENST00000622629 CKS1BP61024 79 aa10□□□□□ -0.81
MSH6-215ENST00000622629 BVES-AS1Q5T3Y7 98 aa10□□□□□ -0.81
MSH6-215ENST00000622629 ZNF479Q96JC4 524 aa10□□□□□ -0.81
MSH6-215ENST00000622629 RNF114Q9Y508 228 aa10□□□□□ -0.81
MSH6-215ENST00000622629 A0A1B0GXF2 115 aa10□□□□□ -0.81
MSH6-215ENST00000622629 LGALS9BQ3B8N2 356 aa10□□□□□ -0.81
MSH6-215ENST00000622629 LGALS9CQ6DKI2 356 aa10□□□□□ -0.81
MSH6-215ENST00000622629 LINC01587Q99440 93 aa10□□□□□ -0.81
MSH6-215ENST00000622629 BUB3O43684 328 aa10□□□□□ -0.81
MSH6-215ENST00000622629 ANXA2RQ3ZCQ2 193 aa10□□□□□ -0.81
MSH6-215ENST00000622629 WI2-2373I1.2A0A1W2PRP0 233 aa9.99□□□□□ -0.81
MSH6-215ENST00000622629 H7C1H1 209 aa9.99□□□□□ -0.81
MSH6-215ENST00000622629 PAPPA-AS1Q5QFB9 102 aa9.99□□□□□ -0.81
MSH6-215ENST00000622629 PIP4P2Q8N4L2 257 aa9.99□□□□□ -0.81
MSH6-215ENST00000622629 TET2Q6N021 2002 aaPredicted RBP9.99□□□□□ -0.81
MSH6-215ENST00000622629 C2orf70A6NJV1 201 aa9.99□□□□□ -0.81
MSH6-215ENST00000622629 NEGR1Q7Z3B1 354 aa9.99□□□□□ -0.81
MSH6-215ENST00000622629 CHAC1Q9BUX1 264 aa9.99□□□□□ -0.81
MSH6-215ENST00000622629 SUMO2P61956 95 aaKnown RBP9.99□□□□□ -0.81
MSH6-215ENST00000622629 MRPL35Q9NZE8 188 aaKnown RBP9.99□□□□□ -0.81
MSH6-215ENST00000622629 IGKV3OR2-268A0A0C4DH90 116 aa9.98□□□□□ -0.81
MSH6-215ENST00000622629 Q8N8P6 123 aa9.98□□□□□ -0.81
MSH6-215ENST00000622629 TP73-AS1Q9UF72 201 aa9.98□□□□□ -0.81
MSH6-215ENST00000622629 PCP2Q8IVA1 136 aa9.98□□□□□ -0.81
MSH6-215ENST00000622629 IGHV4-61A0A0C4DH41 118 aa9.98□□□□□ -0.81
MSH6-215ENST00000622629 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
MSH6-215ENST00000622629 RPL13AP40429 203 aaKnown RBP9.98□□□□□ -0.81
MSH6-215ENST00000622629 DEFB1P60022 68 aa9.98□□□□□ -0.81
MSH6-215ENST00000622629 BLCAPP62952 87 aa9.98□□□□□ -0.81
MSH6-215ENST00000622629 GAGE1Q13065 139 aa9.98□□□□□ -0.81
MSH6-215ENST00000622629 ZNF292O60281 2723 aa9.98□□□□□ -0.81
MSH6-215ENST00000622629 LRRK2Q5S007 2527 aa9.97□□□□□ -0.81
MSH6-215ENST00000622629 DUSP14O95147 198 aaKnown RBP9.97□□□□□ -0.81
MSH6-215ENST00000622629 CRYGBP07316 175 aa9.97□□□□□ -0.81
MSH6-215ENST00000622629 PLNP26678 52 aa9.97□□□□□ -0.81
MSH6-215ENST00000622629 FBXL19-AS1Q494R0 122 aa9.97□□□□□ -0.81
MSH6-215ENST00000622629 C2orf66Q6UXQ4 117 aa9.97□□□□□ -0.81
MSH6-215ENST00000622629 LINC00310P59036 64 aa9.97□□□□□ -0.81
MSH6-215ENST00000622629 ZNF876PQ49A33 203 aa9.97□□□□□ -0.81
MSH6-215ENST00000622629 ZNF462Q96JM2 2506 aa9.97□□□□□ -0.81
MSH6-215ENST00000622629 IGKV3D-20A0A0C4DH25 116 aa9.97□□□□□ -0.81
MSH6-215ENST00000622629 SPINK13Q1W4C9 94 aa9.97□□□□□ -0.81
MSH6-215ENST00000622629 TRAV12-2A0A075B6T6 113 aa9.96□□□□□ -0.81
MSH6-215ENST00000622629 LINC01548A6NM66 108 aa9.96□□□□□ -0.81
MSH6-215ENST00000622629 NDUFA4O00483 81 aa9.96□□□□□ -0.81
MSH6-215ENST00000622629 LOXL1Q08397 574 aaPredicted RBP9.96□□□□□ -0.81
MSH6-215ENST00000622629 HERV-K104P63124 156 aa9.96□□□□□ -0.82
MSH6-215ENST00000622629 HOXA3O43365 443 aaPredicted RBP9.96□□□□□ -0.82
MSH6-215ENST00000622629 IGHV4-38-2P0DP08 117 aa9.96□□□□□ -0.82
MSH6-215ENST00000622629 LINC01545Q5VT33 79 aa9.96□□□□□ -0.82
MSH6-215ENST00000622629 LY6G5BQ8NDX9 201 aa9.96□□□□□ -0.82
MSH6-215ENST00000622629 OR5A1Q8NGJ0 315 aa9.96□□□□□ -0.82
MSH6-215ENST00000622629 MGAQ8IWI9 3026 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 VCYO14598 125 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 CCL25O15444 150 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 GNRH2O43555 120 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 MYCNOSP40205 109 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 ZNF80P51504 273 aaPredicted RBP9.95□□□□□ -0.82
MSH6-215ENST00000622629 RRN3P1Q2M238 152 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 TTTY13Q9BZ97 58 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 YAE1D1Q9NRH1 226 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 POLQO75417 2590 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 IGHV4-39P01824 125 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 SMIM2Q9BVW6 85 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 RNF223E7ERA6 249 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 KLK9Q9UKQ9 250 aa9.95□□□□□ -0.82
MSH6-215ENST00000622629 VWC2LB2RUY7 222 aa9.94□□□□□ -0.82
MSH6-215ENST00000622629 SMIM20Q8N5G0 67 aa9.94□□□□□ -0.82
MSH6-215ENST00000622629 MRAP2Q96G30 205 aa9.94□□□□□ -0.82
MSH6-215ENST00000622629 CST9LQ9H4G1 147 aa9.94□□□□□ -0.82
MSH6-215ENST00000622629 TRAV2A0A0B4J234 112 aa9.94□□□□□ -0.82
MSH6-215ENST00000622629 COX6CP09669 75 aa9.94□□□□□ -0.82
MSH6-215ENST00000622629 RNASE8Q8TDE3 154 aaKnown RBP9.94□□□□□ -0.82
MSH6-215ENST00000622629 ABCA12Q86UK0 2595 aa9.94□□□□□ -0.82
MSH6-215ENST00000622629 KNCNA6PVL3 124 aa9.93□□□□□ -0.82
MSH6-215ENST00000622629 CD28P10747 220 aa9.93□□□□□ -0.82
MSH6-215ENST00000622629 SIRPDQ9H106 197 aa9.93□□□□□ -0.82
MSH6-215ENST00000622629 PRORYQ9H606 182 aa9.93□□□□□ -0.82
MSH6-215ENST00000622629 TP53TG1Q9Y2A0 90 aa9.93□□□□□ -0.82
MSH6-215ENST00000622629 FRYLO94915 3013 aa9.93□□□□□ -0.82
MSH6-215ENST00000622629 CRIP1P50238 77 aa9.93□□□□□ -0.82
MSH6-215ENST00000622629 DEFB131AP59861 70 aa9.93□□□□□ -0.82
MSH6-215ENST00000622629 CDSNQ15517 529 aa9.93□□□□□ -0.82
MSH6-215ENST00000622629 C19orf54Q5BKX5 351 aa9.93□□□□□ -0.82
MSH6-215ENST00000622629 PEMTQ9UBM1 199 aa9.93□□□□□ -0.82
MSH6-215ENST00000622629 UBE2L6O14933 153 aa9.92□□□□□ -0.82
MSH6-215ENST00000622629 MEIG1Q5JSS6 88 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms