RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 DEFB112Q30KQ8 113 aa10.29□□□□□ -0.76
SIRPA-204ENST00000622179 PAPPA-AS1Q5QFB9 102 aa10.29□□□□□ -0.76
SIRPA-204ENST00000622179 OR9G4Q8NGQ1 327 aa10.29□□□□□ -0.76
SIRPA-204ENST00000622179 ODF3BA8MYP8 253 aa10.29□□□□□ -0.76
SIRPA-204ENST00000622179 LMO4P61968 165 aa10.29□□□□□ -0.76
SIRPA-204ENST00000622179 SEC11AP67812 179 aa10.29□□□□□ -0.76
SIRPA-204ENST00000622179 VCX2Q9H322 139 aa10.29□□□□□ -0.76
SIRPA-204ENST00000622179 KLK9Q9UKQ9 250 aa10.29□□□□□ -0.76
SIRPA-204ENST00000622179 TP53TG3Q9ULZ0 132 aa10.29□□□□□ -0.76
SIRPA-204ENST00000622179 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
SIRPA-204ENST00000622179 NEGR1Q7Z3B1 354 aa10.28□□□□□ -0.76
SIRPA-204ENST00000622179 MLST8Q9BVC4 326 aa10.28□□□□□ -0.76
SIRPA-204ENST00000622179 SMPXQ9UHP9 88 aa10.28□□□□□ -0.76
SIRPA-204ENST00000622179 LY6LH3BQJ8 138 aa10.28□□□□□ -0.76
SIRPA-204ENST00000622179 SPOCK3Q9BQ16 436 aa10.28□□□□□ -0.76
SIRPA-204ENST00000622179 GATA3P23771 443 aa10.28□□□□□ -0.76
SIRPA-204ENST00000622179 DEFB131AP59861 70 aa10.28□□□□□ -0.76
SIRPA-204ENST00000622179 ZNF876PQ49A33 203 aa10.28□□□□□ -0.76
SIRPA-204ENST00000622179 STHQ8IWL8 128 aa10.28□□□□□ -0.76
SIRPA-204ENST00000622179 MRPL52Q86TS9 123 aaKnown RBP10.28□□□□□ -0.76
SIRPA-204ENST00000622179 Q5PR19 223 aa10.27□□□□□ -0.76
SIRPA-204ENST00000622179 KLHL30-AS1Q8NEE0 82 aa10.27□□□□□ -0.76
SIRPA-204ENST00000622179 DKK2Q9UBU2 259 aa10.27□□□□□ -0.76
SIRPA-204ENST00000622179 LRRK2Q5S007 2527 aa10.27□□□□□ -0.77
SIRPA-204ENST00000622179 IGKV3D-20A0A0C4DH25 116 aa10.27□□□□□ -0.77
SIRPA-204ENST00000622179 GNRH2O43555 120 aa10.27□□□□□ -0.77
SIRPA-204ENST00000622179 SUMO2P61956 95 aaKnown RBP10.27□□□□□ -0.77
SIRPA-204ENST00000622179 COX11Q9Y6N1 276 aa10.27□□□□□ -0.77
SIRPA-204ENST00000622179 SPTBN5Q9NRC6 3674 aaKnown RBP10.27□□□□□ -0.77
SIRPA-204ENST00000622179 IGHV7-4-1A0A0J9YVY3 117 aa10.27□□□□□ -0.77
SIRPA-204ENST00000622179 UBE2L6O14933 153 aa10.27□□□□□ -0.77
SIRPA-204ENST00000622179 Q8N8P6 123 aa10.27□□□□□ -0.77
SIRPA-204ENST00000622179 C10orf105Q8TEF2 133 aa10.27□□□□□ -0.77
SIRPA-204ENST00000622179 ESDP10768 282 aa10.26□□□□□ -0.77
SIRPA-204ENST00000622179 PCP4P48539 62 aa10.26□□□□□ -0.77
SIRPA-204ENST00000622179 TNFRSF13BO14836 293 aaPredicted RBP10.26□□□□□ -0.77
SIRPA-204ENST00000622179 MBD6Q96DN6 1003 aa10.26□□□□□ -0.77
SIRPA-204ENST00000622179 TRGV11A0A075B6L2 103 aa10.26□□□□□ -0.77
SIRPA-204ENST00000622179 TET2Q6N021 2002 aaPredicted RBP10.26□□□□□ -0.77
SIRPA-204ENST00000622179 KNCNA6PVL3 124 aa10.26□□□□□ -0.77
SIRPA-204ENST00000622179 TRBV12-3P01733 135 aa10.26□□□□□ -0.77
SIRPA-204ENST00000622179 PF4P02776 101 aa10.25□□□□□ -0.77
SIRPA-204ENST00000622179 UBE2V1Q13404 147 aa10.25□□□□□ -0.77
SIRPA-204ENST00000622179 VCYO14598 125 aa10.25□□□□□ -0.77
SIRPA-204ENST00000622179 AJUBAQ96IF1 538 aa10.25□□□□□ -0.77
SIRPA-204ENST00000622179 POLQO75417 2590 aa10.25□□□□□ -0.77
SIRPA-204ENST00000622179 A0A1B0GXF2 115 aa10.25□□□□□ -0.77
SIRPA-204ENST00000622179 KIR3DS1Q14943 382 aa10.25□□□□□ -0.77
SIRPA-204ENST00000622179 C2orf66Q6UXQ4 117 aa10.25□□□□□ -0.77
SIRPA-204ENST00000622179 Q96MF0 132 aa10.25□□□□□ -0.77
SIRPA-204ENST00000622179 ZNF80P51504 273 aaPredicted RBP10.24□□□□□ -0.77
SIRPA-204ENST00000622179 UNQ9165/PRO28630Q6UXU0 137 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 UBE2E2Q96LR5 201 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 TRGV2A0A075B6R0 118 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 COX8AP10176 69 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 LGALS9BQ3B8N2 356 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 C19orf54Q5BKX5 351 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 TCTEX1D4Q5JR98 221 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 LGALS9CQ6DKI2 356 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 MRPL35Q9NZE8 188 aaKnown RBP10.24□□□□□ -0.77
SIRPA-204ENST00000622179 PLNP26678 52 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 MYCNOSP40205 109 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 COTL1Q14019 142 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 LINC01559Q495D7 138 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 C11orf71Q6IPW1 123 aa10.24□□□□□ -0.77
SIRPA-204ENST00000622179 ZNF418Q8TF45 676 aaPredicted RBP10.24□□□□□ -0.77
SIRPA-204ENST00000622179 CIDEAO60543 219 aa10.23□□□□□ -0.77
SIRPA-204ENST00000622179 SAMD5Q5TGI4 173 aa10.23□□□□□ -0.77
SIRPA-204ENST00000622179 HOXA3O43365 443 aaPredicted RBP10.23□□□□□ -0.77
SIRPA-204ENST00000622179 CD28P10747 220 aa10.23□□□□□ -0.77
SIRPA-204ENST00000622179 CCDC140Q96MF4 163 aa10.23□□□□□ -0.77
SIRPA-204ENST00000622179 CD5LO43866 347 aa10.23□□□□□ -0.77
SIRPA-204ENST00000622179 TNRC6BQ9UPQ9 1833 aaKnown RBP10.23□□□□□ -0.77
SIRPA-204ENST00000622179 DEFB136Q30KP8 78 aa10.23□□□□□ -0.77
SIRPA-204ENST00000622179 COL6A3P12111 3177 aa10.22□□□□□ -0.77
SIRPA-204ENST00000622179 RBAKDNA6NC62 111 aa10.22□□□□□ -0.77
SIRPA-204ENST00000622179 NSUN5P1Q3KNT7 163 aa10.22□□□□□ -0.77
SIRPA-204ENST00000622179 CHAC1Q9BUX1 264 aa10.22□□□□□ -0.77
SIRPA-204ENST00000622179 SMIM2Q9BVW6 85 aa10.22□□□□□ -0.77
SIRPA-204ENST00000622179 RPL13AP40429 203 aaKnown RBP10.22□□□□□ -0.77
SIRPA-204ENST00000622179 FRYLO94915 3013 aa10.22□□□□□ -0.77
SIRPA-204ENST00000622179 TP53TG1Q9Y2A0 90 aa10.22□□□□□ -0.77
SIRPA-204ENST00000622179 FSTL3O95633 263 aa10.21□□□□□ -0.77
SIRPA-204ENST00000622179 MEIG1Q5JSS6 88 aa10.21□□□□□ -0.77
SIRPA-204ENST00000622179 C16orf54Q6UWD8 224 aa10.21□□□□□ -0.77
SIRPA-204ENST00000622179 ZNF479Q96JC4 524 aa10.21□□□□□ -0.77
SIRPA-204ENST00000622179 HIVEP2P31629 2446 aa10.21□□□□□ -0.77
SIRPA-204ENST00000622179 A0A1B0GWB2 263 aa10.21□□□□□ -0.77
SIRPA-204ENST00000622179 IGHV3-53P01767 116 aa10.21□□□□□ -0.77
SIRPA-204ENST00000622179 LOXL1Q08397 574 aaPredicted RBP10.21□□□□□ -0.77
SIRPA-204ENST00000622179 ZNF48Q96MX3 618 aaPredicted RBP10.21□□□□□ -0.77
SIRPA-204ENST00000622179 ABCA12Q86UK0 2595 aa10.21□□□□□ -0.77
SIRPA-204ENST00000622179 C2orf70A6NJV1 201 aa10.21□□□□□ -0.78
SIRPA-204ENST00000622179 SAP30O75446 220 aa10.21□□□□□ -0.78
SIRPA-204ENST00000622179 CRIP1P50238 77 aa10.21□□□□□ -0.78
SIRPA-204ENST00000622179 PCP2Q8IVA1 136 aa10.21□□□□□ -0.78
SIRPA-204ENST00000622179 RNF114Q9Y508 228 aa10.21□□□□□ -0.78
SIRPA-204ENST00000622179 TRAV2A0A0B4J234 112 aa10.2□□□□□ -0.78
SIRPA-204ENST00000622179 SDHAF1A6NFY7 115 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms