RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 CEP250Q9BV73 2442 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 DIDO1Q9BTC0 2240 aaKnown RBP8.88□□□□□ -0.99
CLIP1-219ENST00000620786 NPYP01303 97 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 FAM231DQ6ZW35 169 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 RNF152Q8N8N0 203 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 Q8NA96 180 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 CITED2Q99967 270 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-219ENST00000620786 DNAJC9-AS1A6NH13 148 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 LTAP01374 205 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 FGF23Q9GZV9 251 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-219ENST00000620786 V9GYV3 84 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 LOC105371267A0A1B0GV96 52 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 C9JAW5 83 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 OCIAD2Q56VL3 154 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 Q8N9W7 124 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 CRLF1O75462 422 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 MPV17L2Q567V2 206 aa8.88□□□□□ -0.99
CLIP1-219ENST00000620786 KRTAP27-1Q3LI81 207 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 ADAMTSL5Q6ZMM2 481 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 C20orf78Q9BR46 151 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 SIGLEC8Q9NYZ4 499 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 KIAA2026Q5HYC2 2103 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 SOCS3O14543 225 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 ATP6V0E2Q8NHE4 81 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 C2orf70A6NJV1 201 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 BUB3O43684 328 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 Q0VG73 95 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 SH2D6Q7Z4S9 175 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 SPRY4Q9C004 299 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 IGLV11-55A0A075B6I3 123 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 I3L2K1 104 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 DEFB135Q30KP9 77 aa8.87□□□□□ -0.99
CLIP1-219ENST00000620786 TIRAPP58753 221 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 NOTCH4Q99466 2003 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 SPRY2O43597 315 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 RNF138Q8WVD3 245 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 A8MWP6 167 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 DEFB4AO15263 64 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 PRR20EP86478 221 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 PRR20CP86479 221 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 PRR20DP86480 221 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 PRR20BP86481 221 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 PRR20AP86496 221 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 C16orf54Q6UWD8 224 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 SIGMAR1Q99720 223 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 EGR2P11161 476 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-219ENST00000620786 LRRC75A-AS1Q8N1F1 130 aa8.86□□□□□ -0.99
CLIP1-219ENST00000620786 POLEQ07864 2286 aa8.85□□□□□ -0.99
CLIP1-219ENST00000620786 Q8N7P7 452 aa8.85□□□□□ -0.99
CLIP1-219ENST00000620786 IGLV10-54A0A075B6I4 117 aa8.85□□□□□ -0.99
CLIP1-219ENST00000620786 C19orf84I3L1E1 186 aa8.85□□□□□ -0.99
CLIP1-219ENST00000620786 ZNF493Q6ZR52 646 aa8.85□□□□□ -0.99
CLIP1-219ENST00000620786 DEFB105AQ8NG35 78 aa8.85□□□□□ -0.99
CLIP1-219ENST00000620786 ADCYAP1P18509 176 aa8.85□□□□□ -0.99
CLIP1-219ENST00000620786 ZNF503Q96F45 646 aa8.85□□□□□ -0.99
CLIP1-219ENST00000620786 CAMK2N2Q96S95 79 aa8.85□□□□□ -0.99
CLIP1-219ENST00000620786 LENEPQ9Y5L5 61 aa8.85□□□□□ -0.99
CLIP1-219ENST00000620786 TRAV13-2A0A0B4J235 113 aa8.85□□□□□ -0.99
CLIP1-219ENST00000620786 K7EIM0 57 aa8.84□□□□□ -0.99
CLIP1-219ENST00000620786 LOXL1Q08397 574 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-219ENST00000620786 USF3Q68DE3 2245 aa8.84□□□□□ -0.99
CLIP1-219ENST00000620786 FBXL19-AS1Q494R0 122 aa8.84□□□□□ -0.99
CLIP1-219ENST00000620786 SIRPDQ9H106 197 aa8.84□□□□□ -0.99
CLIP1-219ENST00000620786 ZNF407Q9C0G0 2248 aa8.84□□□□□ -0.99
CLIP1-219ENST00000620786 GAGE2BQ13066 116 aa8.84□□□□□ -0.99
CLIP1-219ENST00000620786 Q8NFD4 153 aa8.84□□□□□ -0.99
CLIP1-219ENST00000620786 CTSGP08311 255 aa8.84□□□□□ -0.99
CLIP1-219ENST00000620786 DSCR8Q96T75 97 aa8.84□□□□□ -0.99
CLIP1-219ENST00000620786 IGLL5B9A064 214 aa8.83□□□□□ -1
CLIP1-219ENST00000620786 C5orf38Q86SI9 138 aa8.83□□□□□ -1
CLIP1-219ENST00000620786 AKAP6Q13023 2319 aa8.83□□□□□ -1
CLIP1-219ENST00000620786 PCP4P48539 62 aa8.83□□□□□ -1
CLIP1-219ENST00000620786 MRPL35Q9NZE8 188 aaKnown RBP8.83□□□□□ -1
CLIP1-219ENST00000620786 ADAMTS9Q9P2N4 1935 aa8.83□□□□□ -1
CLIP1-219ENST00000620786 C9JQL5 133 aa8.83□□□□□ -1
CLIP1-219ENST00000620786 INAFM1C9JVW0 142 aa8.83□□□□□ -1
CLIP1-219ENST00000620786 ZFAND6Q6FIF0 208 aa8.83□□□□□ -1
CLIP1-219ENST00000620786 TMEM89A2RUT3 159 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 ZNF843Q8N446 348 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 SLC25A29Q8N8R3 303 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 WISP2O76076 250 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 CRYGCP07315 174 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 IL17DQ8TAD2 202 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 WIPF3A6NGB9 483 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 HHLA3Q9XRX5 114 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 J3QQQ9 107 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 DOCK7Q96N67 2140 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 ETDCA0A1B0GVM5 59 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 NDUFS5O43920 106 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 DAZ2Q13117 558 aaKnown RBP8.82□□□□□ -1
CLIP1-219ENST00000620786 AMTNQ6UX39 209 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 DAZ4Q86SG3 579 aaKnown RBP8.82□□□□□ -1
CLIP1-219ENST00000620786 NDUFA11Q86Y39 141 aa8.82□□□□□ -1
CLIP1-219ENST00000620786 DAZ3Q9NR90 486 aaKnown RBP8.82□□□□□ -1
CLIP1-219ENST00000620786 A6NDX4 124 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 INAFM2P0DMQ5 153 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 INSL3P51460 131 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 MORN5Q5VZ52 161 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 IGHV4-31P0DP07 118 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 IGHV4-4A0A075B6R2 117 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms