RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 CMTM2Q8TAZ6 248 aa7.72□□□□□ -1.17
TARDBP-221ENST00000619555 MBD3L1Q8WWY6 194 aa7.72□□□□□ -1.17
TARDBP-221ENST00000619555 TVP23CQ96ET8 276 aa7.72□□□□□ -1.17
TARDBP-221ENST00000619555 SGK494Q96LW2 274 aa7.72□□□□□ -1.17
TARDBP-221ENST00000619555 A0A1B0GV50 99 aa7.71□□□□□ -1.18
TARDBP-221ENST00000619555 A0A1W2PRE2 83 aa7.71□□□□□ -1.18
TARDBP-221ENST00000619555 CDK2AP2O75956 126 aa7.71□□□□□ -1.18
TARDBP-221ENST00000619555 IGLV2-11P01706 119 aa7.71□□□□□ -1.18
TARDBP-221ENST00000619555 TCRAP04437 139 aa7.71□□□□□ -1.18
TARDBP-221ENST00000619555 DAZ2Q13117 558 aaKnown RBP7.71□□□□□ -1.18
TARDBP-221ENST00000619555 FAM74A1Q5RGS3 127 aa7.71□□□□□ -1.18
TARDBP-221ENST00000619555 SPATA12Q7Z6I5 190 aa7.71□□□□□ -1.18
TARDBP-221ENST00000619555 ARL6IP6Q8N6S5 226 aa7.71□□□□□ -1.18
TARDBP-221ENST00000619555 C5orf17Q8NAS9 161 aa7.71□□□□□ -1.18
TARDBP-221ENST00000619555 PYGO2Q9BRQ0 406 aa7.71□□□□□ -1.18
TARDBP-221ENST00000619555 GSN-AS1Q9NRJ2 163 aa7.71□□□□□ -1.18
TARDBP-221ENST00000619555 RNASE4P34096 147 aaKnown RBP7.7□□□□□ -1.18
TARDBP-221ENST00000619555 SULT1A2P50226 295 aa7.7□□□□□ -1.18
TARDBP-221ENST00000619555 TTC32Q5I0X7 151 aa7.7□□□□□ -1.18
TARDBP-221ENST00000619555 DPPA3Q6W0C5 159 aa7.7□□□□□ -1.18
TARDBP-221ENST00000619555 MAPKAPK5-AS1Q8N8E1 139 aa7.7□□□□□ -1.18
TARDBP-221ENST00000619555 C11orf72Q8NBR9 251 aa7.7□□□□□ -1.18
TARDBP-221ENST00000619555 SFT2D1Q8WV19 159 aa7.7□□□□□ -1.18
TARDBP-221ENST00000619555 VSIG2Q96IQ7 327 aa7.7□□□□□ -1.18
TARDBP-221ENST00000619555 LINC00479Q96M42 142 aa7.7□□□□□ -1.18
TARDBP-221ENST00000619555 UPK3BQ9BT76 320 aa7.7□□□□□ -1.18
TARDBP-221ENST00000619555 EPDR1Q9UM22 224 aa7.7□□□□□ -1.18
TARDBP-221ENST00000619555 MRPS16Q9Y3D3 137 aaKnown RBP7.7□□□□□ -1.18
TARDBP-221ENST00000619555 A0A096LPF7 62 aa7.69□□□□□ -1.18
TARDBP-221ENST00000619555 TRBV7-9A0A0J9YWB2 115 aa7.69□□□□□ -1.18
TARDBP-221ENST00000619555 F6UZH7 168 aa7.69□□□□□ -1.18
TARDBP-221ENST00000619555 H3BNG1 76 aa7.69□□□□□ -1.18
TARDBP-221ENST00000619555 GPX1P07203 203 aa7.69□□□□□ -1.18
TARDBP-221ENST00000619555 NMBP08949 121 aa7.69□□□□□ -1.18
TARDBP-221ENST00000619555 KRTAP10-2P60368 255 aa7.69□□□□□ -1.18
TARDBP-221ENST00000619555 CCL20P78556 96 aa7.69□□□□□ -1.18
TARDBP-221ENST00000619555 KLF12Q9Y4X4 402 aa7.69□□□□□ -1.18
TARDBP-221ENST00000619555 TRGV2A0A075B6R0 118 aa7.68□□□□□ -1.18
TARDBP-221ENST00000619555 TRGV1A0A0A0MS02 117 aa7.68□□□□□ -1.18
TARDBP-221ENST00000619555 TRAV34A0A0B4J273 112 aa7.68□□□□□ -1.18
TARDBP-221ENST00000619555 PAGE4O60829 102 aa7.68□□□□□ -1.18
TARDBP-221ENST00000619555 H2AFB1P0C5Y9 115 aa7.68□□□□□ -1.18
TARDBP-221ENST00000619555 EIF4E3Q8N5X7 224 aaKnown RBP7.68□□□□□ -1.18
TARDBP-221ENST00000619555 CYB561D1Q8N8Q1 229 aa7.68□□□□□ -1.18
TARDBP-221ENST00000619555 ZNF680Q8NEM1 530 aa7.68□□□□□ -1.18
TARDBP-221ENST00000619555 C8orf49Q96NF6 230 aa7.68□□□□□ -1.18
TARDBP-221ENST00000619555 TP53TG3Q9ULZ0 132 aa7.68□□□□□ -1.18
TARDBP-221ENST00000619555 PSG8Q9UQ74 426 aa7.68□□□□□ -1.18
TARDBP-221ENST00000619555 LENEPQ9Y5L5 61 aa7.68□□□□□ -1.18
TARDBP-221ENST00000619555 SERTM2A0A1B0GWG4 89 aa7.67□□□□□ -1.18
TARDBP-221ENST00000619555 A0A1W2PPQ1 181 aa7.67□□□□□ -1.18
TARDBP-221ENST00000619555 PEX7O00628 323 aa7.67□□□□□ -1.18
TARDBP-221ENST00000619555 ZNF80P51504 273 aaPredicted RBP7.67□□□□□ -1.18
TARDBP-221ENST00000619555 ANXA2RQ3ZCQ2 193 aa7.67□□□□□ -1.18
TARDBP-221ENST00000619555 Q6AWC8 147 aa7.67□□□□□ -1.18
TARDBP-221ENST00000619555 ALKAL2Q6UX46 152 aa7.67□□□□□ -1.18
TARDBP-221ENST00000619555 TMEM75Q8N9X5 138 aa7.67□□□□□ -1.18
TARDBP-221ENST00000619555 C18orf15Q96N68 181 aa7.67□□□□□ -1.18
TARDBP-221ENST00000619555 LINC00467Q9BRT7 94 aa7.67□□□□□ -1.18
TARDBP-221ENST00000619555 TREM1Q9NP99 234 aa7.67□□□□□ -1.18
TARDBP-221ENST00000619555 TRAV1-1A0A0B4J248 108 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 SPINK4O60575 86 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 IFNA7P01567 189 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 IGHV3-53P01767 116 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 BTF3P20290 206 aaKnown RBP7.66□□□□□ -1.18
TARDBP-221ENST00000619555 RAB5CP51148 216 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 TCL1AP56279 114 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 LINC00315P59091 139 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 FLI1Q01543 452 aaPredicted RBP7.66□□□□□ -1.18
TARDBP-221ENST00000619555 MUC21Q5SSG8 566 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 CST9LP1Q5W188 147 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 EIF5AL1Q6IS14 154 aaKnown RBP7.66□□□□□ -1.18
TARDBP-221ENST00000619555 PRNTQ86SH4 94 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 ARL2-SNX15V9GYD0 113 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 HERC1Q15751 4861 aa7.66□□□□□ -1.18
TARDBP-221ENST00000619555 IGHV1OR15-1A0A075B7D0 117 aa7.65□□□□□ -1.18
TARDBP-221ENST00000619555 SCO2A0A1W2PP80 73 aa7.65□□□□□ -1.18
TARDBP-221ENST00000619555 RGS13O14921 159 aa7.65□□□□□ -1.18
TARDBP-221ENST00000619555 PAX4O43316 350 aa7.65□□□□□ -1.18
TARDBP-221ENST00000619555 Q86TA4 180 aa7.65□□□□□ -1.18
TARDBP-221ENST00000619555 Q8N1X5 172 aa7.65□□□□□ -1.18
TARDBP-221ENST00000619555 HIST1H2BAQ96A08 127 aa7.65□□□□□ -1.18
TARDBP-221ENST00000619555 NKX6-2Q9C056 277 aaPredicted RBP7.65□□□□□ -1.18
TARDBP-221ENST00000619555 SCRT2Q9NQ03 307 aa7.65□□□□□ -1.18
TARDBP-221ENST00000619555 MRPL16Q9NX20 251 aaKnown RBP7.65□□□□□ -1.18
TARDBP-221ENST00000619555 C11orf21Q9P2W6 132 aa7.65□□□□□ -1.18
TARDBP-221ENST00000619555 K7EQM0 130 aa7.64□□□□□ -1.19
TARDBP-221ENST00000619555 SIVA1O15304 175 aa7.64□□□□□ -1.19
TARDBP-221ENST00000619555 Q6ZRN7 208 aaPredicted RBP7.64□□□□□ -1.19
TARDBP-221ENST00000619555 GNG13Q9P2W3 67 aa7.64□□□□□ -1.19
TARDBP-221ENST00000619555 TNFRSF18Q9Y5U5 241 aa7.64□□□□□ -1.19
TARDBP-221ENST00000619555 NXPH4O95158 308 aa7.63□□□□□ -1.19
TARDBP-221ENST00000619555 GCGP01275 180 aa7.63□□□□□ -1.19
TARDBP-221ENST00000619555 FUSP35637 526 aaKnown RBP eCLIP7.63□□□□□ -1.193e-10■■□□□ 12.1
TARDBP-221ENST00000619555 IBA57Q5T440 356 aaKnown RBP7.63□□□□□ -1.19
TARDBP-221ENST00000619555 NDFIP1Q9BT67 221 aa7.63□□□□□ -1.19
TARDBP-221ENST00000619555 MDFICQ9P1T7 246 aa7.63□□□□□ -1.19
TARDBP-221ENST00000619555 NAGKQ9UJ70 344 aa7.63□□□□□ -1.19
TARDBP-221ENST00000619555 ICOSQ9Y6W8 199 aa7.63□□□□□ -1.19
TARDBP-221ENST00000619555 DNAH8Q96JB1 4490 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms