RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 CD40P25942 277 aa11.3□□□□□ -0.6
SYNRG-225ENST00000619541 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
SYNRG-225ENST00000619541 ANKRD29Q8N6D5 301 aa11.3□□□□□ -0.6
SYNRG-225ENST00000619541 ATRXP46100 2492 aa11.3□□□□□ -0.6
SYNRG-225ENST00000619541 IGHV3-49A0A0A0MS15 119 aa11.3□□□□□ -0.6
SYNRG-225ENST00000619541 F8VRH5 84 aa11.3□□□□□ -0.6
SYNRG-225ENST00000619541 K7EIM0 57 aa11.3□□□□□ -0.6
SYNRG-225ENST00000619541 IGLC6P0CF74 106 aa11.3□□□□□ -0.6
SYNRG-225ENST00000619541 TCL1BO95988 128 aa11.29□□□□□ -0.6
SYNRG-225ENST00000619541 IGHV1-8P0DP01 117 aa11.29□□□□□ -0.6
SYNRG-225ENST00000619541 PVRIGQ6DKI7 326 aa11.29□□□□□ -0.6
SYNRG-225ENST00000619541 BEX4Q9NWD9 120 aaPredicted RBP11.29□□□□□ -0.6
SYNRG-225ENST00000619541 LYRM7Q5U5X0 104 aa11.29□□□□□ -0.6
SYNRG-225ENST00000619541 IL17RELQ6ZVW7 336 aa11.29□□□□□ -0.6
SYNRG-225ENST00000619541 ABCA4P78363 2273 aa11.29□□□□□ -0.6
SYNRG-225ENST00000619541 C9JAW5 83 aa11.28□□□□□ -0.6
SYNRG-225ENST00000619541 FCN3O75636 299 aa11.28□□□□□ -0.6
SYNRG-225ENST00000619541 GFRALQ6UXV0 394 aa11.28□□□□□ -0.6
SYNRG-225ENST00000619541 C3orf56Q8N813 242 aa11.28□□□□□ -0.6
SYNRG-225ENST00000619541 CFHR4Q92496 578 aa11.28□□□□□ -0.6
SYNRG-225ENST00000619541 IGLV3-9A0A075B6K5 115 aa11.28□□□□□ -0.6
SYNRG-225ENST00000619541 IGHV1-3A0A0C4DH29 117 aa11.28□□□□□ -0.6
SYNRG-225ENST00000619541 Q1RN00 199 aa11.28□□□□□ -0.6
SYNRG-225ENST00000619541 CHD8Q9HCK8 2581 aa11.28□□□□□ -0.6
SYNRG-225ENST00000619541 PRAC2D3DTV9 90 aa11.28□□□□□ -0.6
SYNRG-225ENST00000619541 DYNAPQ8N1N2 210 aa11.28□□□□□ -0.6
SYNRG-225ENST00000619541 A0A0G2JNJ9 132 aa11.27□□□□□ -0.6
SYNRG-225ENST00000619541 VSTM5A8MXK1 200 aa11.27□□□□□ -0.6
SYNRG-225ENST00000619541 M0R381 172 aa11.27□□□□□ -0.6
SYNRG-225ENST00000619541 ATP6V0E2Q8NHE4 81 aa11.27□□□□□ -0.6
SYNRG-225ENST00000619541 Q9UFV3 132 aa11.27□□□□□ -0.6
SYNRG-225ENST00000619541 MGPP08493 103 aa11.27□□□□□ -0.61
SYNRG-225ENST00000619541 CCDC179H3BU77 68 aa11.27□□□□□ -0.61
SYNRG-225ENST00000619541 DYNLRB1Q9NP97 96 aa11.27□□□□□ -0.61
SYNRG-225ENST00000619541 AKAP6Q13023 2319 aa11.26□□□□□ -0.61
SYNRG-225ENST00000619541 TEX36Q5VZQ5 186 aa11.26□□□□□ -0.61
SYNRG-225ENST00000619541 TRBV7-9A0A0J9YWB2 115 aa11.26□□□□□ -0.61
SYNRG-225ENST00000619541 LOXP28300 417 aaPredicted RBP11.26□□□□□ -0.61
SYNRG-225ENST00000619541 MFAP4P55083 255 aa11.26□□□□□ -0.61
SYNRG-225ENST00000619541 OR11H6Q8NGC7 330 aa11.26□□□□□ -0.61
SYNRG-225ENST00000619541 PDE6HQ13956 83 aa11.25□□□□□ -0.61
SYNRG-225ENST00000619541 NCOR2Q9Y618 2525 aa11.25□□□□□ -0.61
SYNRG-225ENST00000619541 CSMD1Q96PZ7 3565 aa11.25□□□□□ -0.61
SYNRG-225ENST00000619541 GAGE12JA6NER3 117 aa11.25□□□□□ -0.61
SYNRG-225ENST00000619541 GAGE7O76087 117 aa11.25□□□□□ -0.61
SYNRG-225ENST00000619541 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
SYNRG-225ENST00000619541 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
SYNRG-225ENST00000619541 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
SYNRG-225ENST00000619541 GAGE4Q13068 117 aa11.25□□□□□ -0.61
SYNRG-225ENST00000619541 Q6ZQT7 251 aa11.25□□□□□ -0.61
SYNRG-225ENST00000619541 C17orf100A8MU93 164 aa11.25□□□□□ -0.61
SYNRG-225ENST00000619541 MRPS12O15235 138 aaKnown RBP11.25□□□□□ -0.61
SYNRG-225ENST00000619541 TMEM262E9PQX1 116 aa11.24□□□□□ -0.61
SYNRG-225ENST00000619541 K7ENP7 123 aa11.24□□□□□ -0.61
SYNRG-225ENST00000619541 LINC01559Q495D7 138 aa11.24□□□□□ -0.61
SYNRG-225ENST00000619541 TRPT1Q86TN4 253 aaKnown RBP11.24□□□□□ -0.61
SYNRG-225ENST00000619541 TRAV4A0A0B4J268 109 aa11.24□□□□□ -0.61
SYNRG-225ENST00000619541 LYNX1G3V0Z9 82 aa11.24□□□□□ -0.61
SYNRG-225ENST00000619541 IGHV4-39P01824 125 aa11.24□□□□□ -0.61
SYNRG-225ENST00000619541 LYNX1P0DP58 116 aa11.24□□□□□ -0.61
SYNRG-225ENST00000619541 TMEM170BQ5T4T1 132 aa11.24□□□□□ -0.61
SYNRG-225ENST00000619541 TIMM23O14925 209 aa11.23□□□□□ -0.61
SYNRG-225ENST00000619541 S100A4P26447 101 aaKnown RBP11.23□□□□□ -0.61
SYNRG-225ENST00000619541 AJUBAQ96IF1 538 aa11.23□□□□□ -0.61
SYNRG-225ENST00000619541 TMEM178BH3BS89 294 aa11.23□□□□□ -0.61
SYNRG-225ENST00000619541 SLC25A20O43772 301 aa11.23□□□□□ -0.61
SYNRG-225ENST00000619541 TMEM155Q4W5P6 130 aa11.23□□□□□ -0.61
SYNRG-225ENST00000619541 LINC00311Q8N616 119 aa11.23□□□□□ -0.61
SYNRG-225ENST00000619541 ARHGAP32A7KAX9 2087 aa11.23□□□□□ -0.61
SYNRG-225ENST00000619541 C21orf62Q9NYP8 219 aa11.23□□□□□ -0.61
SYNRG-225ENST00000619541 IGKV3D-20A0A0C4DH25 116 aa11.22□□□□□ -0.61
SYNRG-225ENST00000619541 NTN5Q8WTR8 489 aaPredicted RBP11.22□□□□□ -0.61
SYNRG-225ENST00000619541 IGLV2-18A0A075B6J9 118 aa11.22□□□□□ -0.61
SYNRG-225ENST00000619541 NDUFA11Q86Y39 141 aa11.22□□□□□ -0.61
SYNRG-225ENST00000619541 CRLF1O75462 422 aa11.22□□□□□ -0.61
SYNRG-225ENST00000619541 NDUFV3P56181 108 aaKnown RBP11.22□□□□□ -0.61
SYNRG-225ENST00000619541 C2orf66Q6UXQ4 117 aa11.22□□□□□ -0.61
SYNRG-225ENST00000619541 RPL39LQ96EH5 51 aaKnown RBP11.22□□□□□ -0.61
SYNRG-225ENST00000619541 SMIM2Q9BVW6 85 aa11.22□□□□□ -0.61
SYNRG-225ENST00000619541 RAB1BQ9H0U4 201 aa11.22□□□□□ -0.61
SYNRG-225ENST00000619541 C11orf21Q9P2W6 132 aa11.22□□□□□ -0.61
SYNRG-225ENST00000619541 CRIP2P52943 208 aaPredicted RBP11.21□□□□□ -0.61
SYNRG-225ENST00000619541 DLX6P56179 175 aa11.21□□□□□ -0.61
SYNRG-225ENST00000619541 VCX2Q9H322 139 aa11.21□□□□□ -0.61
SYNRG-225ENST00000619541 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.61
SYNRG-225ENST00000619541 C14orf178Q8N769 122 aaPredicted RBP11.21□□□□□ -0.61
SYNRG-225ENST00000619541 NRACQ8N912 160 aa11.21□□□□□ -0.61
SYNRG-225ENST00000619541 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.62
SYNRG-225ENST00000619541 CRYGBP07316 175 aa11.21□□□□□ -0.62
SYNRG-225ENST00000619541 IFITM1P13164 125 aa11.2□□□□□ -0.62
SYNRG-225ENST00000619541 FAM159AQ6UWV7 190 aa11.2□□□□□ -0.62
SYNRG-225ENST00000619541 RPL32P62910 135 aaKnown RBP11.2□□□□□ -0.62
SYNRG-225ENST00000619541 MSRB2Q9Y3D2 182 aa11.2□□□□□ -0.62
SYNRG-225ENST00000619541 CLEC3BP05452 202 aa11.19□□□□□ -0.62
SYNRG-225ENST00000619541 THBDP07204 575 aa11.19□□□□□ -0.62
SYNRG-225ENST00000619541 HERVK_113P61574 105 aa11.19□□□□□ -0.62
SYNRG-225ENST00000619541 ADIPOQQ15848 244 aa11.19□□□□□ -0.62
SYNRG-225ENST00000619541 Q6ZS46 218 aa11.19□□□□□ -0.62
SYNRG-225ENST00000619541 NHLRC4P0CG21 123 aaPredicted RBP11.19□□□□□ -0.62
SYNRG-225ENST00000619541 ORMDL2Q53FV1 153 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms