RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 DNAH5Q8TE73 4624 aa8.13□□□□□ -1.11
UPF3B-204ENST00000619445 K7EQM0 130 aa8.12□□□□□ -1.11
UPF3B-204ENST00000619445 DNAH10OSP0CZ25 163 aa8.12□□□□□ -1.11
UPF3B-204ENST00000619445 ZNF479Q96JC4 524 aa8.12□□□□□ -1.11
UPF3B-204ENST00000619445 SH3BGRL3Q9H299 93 aa8.12□□□□□ -1.11
UPF3B-204ENST00000619445 TREM1Q9NP99 234 aa8.12□□□□□ -1.11
UPF3B-204ENST00000619445 MSRB1Q9NZV6 116 aa8.12□□□□□ -1.11
UPF3B-204ENST00000619445 NAGKQ9UJ70 344 aa8.12□□□□□ -1.11
UPF3B-204ENST00000619445 FBLL1A6NHQ2 334 aaKnown RBP8.11□□□□□ -1.11
UPF3B-204ENST00000619445 Q6ZQT7 251 aa8.11□□□□□ -1.11
UPF3B-204ENST00000619445 GOLT1AQ6ZVE7 132 aa8.11□□□□□ -1.11
UPF3B-204ENST00000619445 SMIM3Q9BZL3 60 aa8.11□□□□□ -1.11
UPF3B-204ENST00000619445 IGHV3-16A0A0C4DH30 117 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 MBP02144 154 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 PFN1P07737 140 aaKnown RBP8.1□□□□□ -1.11
UPF3B-204ENST00000619445 SFTA3P0C7M3 94 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 OR10G9Q8NGN4 311 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 OR10G7Q8NGN6 311 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 ASB13Q8WXK3 278 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 RPH3ALQ9UNE2 315 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 EPM2AB3EWF7 344 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 CRYGDP07320 174 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 IFITM3Q01628 133 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 ZFP69Q49AA0 526 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 C5orf17Q8NAS9 161 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 OR2G3Q8NGZ4 309 aa8.1□□□□□ -1.11
UPF3B-204ENST00000619445 APOBP04114 4563 aaKnown RBP8.09□□□□□ -1.11
UPF3B-204ENST00000619445 A0A087WTM6 91 aa8.09□□□□□ -1.12
UPF3B-204ENST00000619445 TRAV8-6A0A0B4J262 113 aa8.09□□□□□ -1.12
UPF3B-204ENST00000619445 TAAR5O14804 337 aa8.09□□□□□ -1.12
UPF3B-204ENST00000619445 GATA1P15976 413 aaPredicted RBP8.09□□□□□ -1.12
UPF3B-204ENST00000619445 CDC34P49427 236 aaPredicted RBP8.09□□□□□ -1.12
UPF3B-204ENST00000619445 PPT1P50897 306 aa8.09□□□□□ -1.12
UPF3B-204ENST00000619445 SERF2P84101 59 aa8.09□□□□□ -1.12
UPF3B-204ENST00000619445 WFDC10BQ8IUB3 73 aa8.09□□□□□ -1.12
UPF3B-204ENST00000619445 NHLRC2Q8NBF2 726 aa8.09□□□□□ -1.12
UPF3B-204ENST00000619445 PRADC1Q9BSG0 188 aa8.09□□□□□ -1.12
UPF3B-204ENST00000619445 PSMG3Q9BT73 122 aaPredicted RBP8.09□□□□□ -1.12
UPF3B-204ENST00000619445 IGHV3-38A0A0C4DH36 116 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 TRBV6-4A0A1B0GX49 114 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 A6NHS1 94 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 A6NJY4 79 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 GNRH2O43555 120 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 TYMSP04818 313 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 STAG3L2P0CL84 134 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 STAG3L3P0CL85 134 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 ARL14EPLP0DKL9 152 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 RAB2AP61019 212 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 RHOHQ15669 191 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 ZNF876PQ49A33 203 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 NTN5Q8WTR8 489 aaPredicted RBP8.08□□□□□ -1.12
UPF3B-204ENST00000619445 PTH2Q96A98 100 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 TMEM167BQ9NRX6 74 aa8.08□□□□□ -1.12
UPF3B-204ENST00000619445 DMBT1Q9UGM3 2413 aaPredicted RBP8.07□□□□□ -1.12
UPF3B-204ENST00000619445 PSCAO43653 123 aa8.07□□□□□ -1.12
UPF3B-204ENST00000619445 TCRAP04437 139 aa8.07□□□□□ -1.12
UPF3B-204ENST00000619445 LINC01556Q5JQF7 62 aa8.07□□□□□ -1.12
UPF3B-204ENST00000619445 PIK3CD-AS1Q5SR53 167 aa8.07□□□□□ -1.12
UPF3B-204ENST00000619445 SAPCD1Q5SSQ6 148 aa8.07□□□□□ -1.12
UPF3B-204ENST00000619445 SUN5Q8TC36 379 aa8.07□□□□□ -1.12
UPF3B-204ENST00000619445 WFDC1Q9HC57 220 aa8.07□□□□□ -1.12
UPF3B-204ENST00000619445 TRAV8-1A0A0A6YYK1 113 aa8.06□□□□□ -1.12
UPF3B-204ENST00000619445 F6UZH7 168 aa8.06□□□□□ -1.12
UPF3B-204ENST00000619445 CXorf1O96002 111 aa8.06□□□□□ -1.12
UPF3B-204ENST00000619445 MGST1P10620 155 aaKnown RBP8.06□□□□□ -1.12
UPF3B-204ENST00000619445 SMUG1Q53HV7 270 aa8.06□□□□□ -1.12
UPF3B-204ENST00000619445 FRZBQ92765 325 aa8.06□□□□□ -1.12
UPF3B-204ENST00000619445 AQP10Q96PS8 301 aa8.06□□□□□ -1.12
UPF3B-204ENST00000619445 RS1O15537 224 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 GCGP01275 180 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 GCSHP23434 173 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 GCHFRP30047 84 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 GNG5P63218 68 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 LAGE3Q14657 143 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 CYB561D1Q8N8Q1 229 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 TMEM75Q8N9X5 138 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 HSD17B11Q8NBQ5 300 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 RAB24Q969Q5 203 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 TVP23CQ96ET8 276 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 ACTR3CQ9C0K3 210 aaPredicted RBP8.05□□□□□ -1.12
UPF3B-204ENST00000619445 TNFSF18Q9UNG2 199 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 PSG8Q9UQ74 426 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 TNFRSF18Q9Y5U5 241 aa8.05□□□□□ -1.12
UPF3B-204ENST00000619445 IBA57-AS1B1ANH7 110 aa8.04□□□□□ -1.12
UPF3B-204ENST00000619445 HMGB3O15347 200 aaKnown RBP8.04□□□□□ -1.12
UPF3B-204ENST00000619445 FLI1Q01543 452 aaPredicted RBP8.04□□□□□ -1.12
UPF3B-204ENST00000619445 OR10J3Q5JRS4 329 aa8.04□□□□□ -1.12
UPF3B-204ENST00000619445 LELP1Q5T871 98 aa8.04□□□□□ -1.12
UPF3B-204ENST00000619445 CFAP126Q5VTH2 177 aa8.04□□□□□ -1.12
UPF3B-204ENST00000619445 SLC25A29Q8N8R3 303 aa8.04□□□□□ -1.12
UPF3B-204ENST00000619445 C9orf85Q96MD7 179 aa8.04□□□□□ -1.12
UPF3B-204ENST00000619445 NKX6-2Q9C056 277 aaPredicted RBP8.04□□□□□ -1.12
UPF3B-204ENST00000619445 EPDR1Q9UM22 224 aa8.04□□□□□ -1.12
UPF3B-204ENST00000619445 A0A1W2PRE2 83 aa8.03□□□□□ -1.12
UPF3B-204ENST00000619445 A8MWV9 139 aa8.03□□□□□ -1.12
UPF3B-204ENST00000619445 PTTG1O95997 202 aa8.03□□□□□ -1.12
UPF3B-204ENST00000619445 ATP6V0CP27449 155 aa8.03□□□□□ -1.12
UPF3B-204ENST00000619445 SUMO1P63165 101 aaKnown RBP8.03□□□□□ -1.12
UPF3B-204ENST00000619445 ZFP2Q6ZN57 461 aa8.03□□□□□ -1.12
UPF3B-204ENST00000619445 INO80EQ8NBZ0 244 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms