RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 H3BNG1 76 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 RGS13O14921 159 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 LY6G6CO95867 125 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 H2AFB1P0C5Y9 115 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 HOXA5P20719 270 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 UBE2G2P60604 165 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 EIF5AL1Q6IS14 154 aaKnown RBP5.78□□□□□ -1.48
NEK3-209ENST00000618856 ZNF575Q86XF7 245 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 SFT2D1Q8WV19 159 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 RASL10AQ92737 203 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 SGK494Q96LW2 274 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 MDFICQ9P1T7 246 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 RPH3ALQ9UNE2 315 aa5.78□□□□□ -1.48
NEK3-209ENST00000618856 DYNC1H1Q14204 4646 aaKnown RBP5.78□□□□□ -1.48
NEK3-209ENST00000618856 hCG_2014768A0A024R1R8 64 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 TRGV11A0A075B6L2 103 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 GAGE12BA1L429 117 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 F6UZH7 168 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 GAGE7O76087 117 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 TYMSP04818 313 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 PFN1P07737 140 aaKnown RBP5.77□□□□□ -1.49
NEK3-209ENST00000618856 GAGE12FP0CL80 117 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 GAGE12GP0CL81 117 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 GAGE12IP0CL82 117 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 CRIP1P50238 77 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 PPT1P50897 306 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 CCL20P78556 96 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 ZNF415Q09FC8 603 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 TMEM183BQ1AE95 376 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 RNF212Q495C1 297 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 SMUG1Q53HV7 270 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 MUC21Q5SSG8 566 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 FAM159AQ6UWV7 190 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 Q86TA4 180 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 IQCF2Q8IXL9 164 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 C15orf53Q8NAA6 179 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 PTH2Q96A98 100 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 KCNS1Q96KK3 526 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 C8orf49Q96NF6 230 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 SPXQ9BT56 116 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 NDFIP1Q9BT67 221 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 ZFP30Q9Y2G7 519 aa5.77□□□□□ -1.49
NEK3-209ENST00000618856 TRAV34A0A0B4J273 112 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 F5H768 121 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 GNRH2O43555 120 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 PAGE4O60829 102 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 GCGP01275 180 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 LTAP01374 205 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 IFNA7P01567 189 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 P0DMU3 169 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 FAM231AP0DMU4 169 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 FAM231CP0DMU5 169 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 ZFP69Q49AA0 526 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 DNLZQ5SXM8 178 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 PRNTQ86SH4 94 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 POM121L12Q8N7R1 296 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 C11orf52Q96A22 123 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 FMC1Q96HJ9 113 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 MLST8Q9BVC4 326 aa5.76□□□□□ -1.49
NEK3-209ENST00000618856 TRGV1A0A0A0MS02 117 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 IGKV3D-20A0A0C4DH25 116 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 S100A9P06702 114 aaKnown RBP5.75□□□□□ -1.49
NEK3-209ENST00000618856 HTN3P15516 51 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 ZNF674Q2M3X9 581 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 TMEM183AQ8IXX5 376 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 LYPD6BQ8NI32 183 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 ZC2HC1AQ96GY0 325 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 VSIG2Q96IQ7 327 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 C9orf85Q96MD7 179 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 TXNDC17Q9BRA2 123 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 SDF2L1Q9HCN8 221 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 MANBALQ9NQG1 85 aa5.75□□□□□ -1.49
NEK3-209ENST00000618856 TRGV2A0A075B6R0 118 aa5.74□□□□□ -1.49
NEK3-209ENST00000618856 TRAV26-1A0A087WT03 109 aa5.74□□□□□ -1.49
NEK3-209ENST00000618856 FABP5P3A8MUU1 101 aa5.74□□□□□ -1.49
NEK3-209ENST00000618856 M0R2P5 195 aa5.74□□□□□ -1.49
NEK3-209ENST00000618856 RNASE3P12724 160 aaKnown RBP5.74□□□□□ -1.49
NEK3-209ENST00000618856 FAM3BP58499 235 aaPredicted RBP5.74□□□□□ -1.49
NEK3-209ENST00000618856 FHL2Q14192 279 aa5.74□□□□□ -1.49
NEK3-209ENST00000618856 PIK3CD-AS1Q5SR53 167 aa5.74□□□□□ -1.49
NEK3-209ENST00000618856 CST9LP1Q5W188 147 aa5.74□□□□□ -1.49
NEK3-209ENST00000618856 MRPL16Q9NX20 251 aaKnown RBP5.74□□□□□ -1.49
NEK3-209ENST00000618856 MUC4Q99102 2169 aa5.74□□□□□ -1.49
NEK3-209ENST00000618856 A0A1B0GV50 99 aa5.73□□□□□ -1.49
NEK3-209ENST00000618856 SCO2A0A1W2PP80 73 aa5.73□□□□□ -1.49
NEK3-209ENST00000618856 KRBOX1C9JBD0 128 aa5.73□□□□□ -1.49
NEK3-209ENST00000618856 SCRT2Q9NQ03 307 aa5.73□□□□□ -1.49
NEK3-209ENST00000618856 NAGKQ9UJ70 344 aa5.73□□□□□ -1.49
NEK3-209ENST00000618856 PKHD1P08F94 4074 aa5.73□□□□□ -1.49
NEK3-209ENST00000618856 A0A096LPF7 62 aa5.72□□□□□ -1.49
NEK3-209ENST00000618856 TRAV4A0A0B4J268 109 aa5.72□□□□□ -1.49
NEK3-209ENST00000618856 TEX46H3BTG2 121 aa5.72□□□□□ -1.49
NEK3-209ENST00000618856 SH2D1AO60880 128 aa5.72□□□□□ -1.49
NEK3-209ENST00000618856 AKR1C3P42330 323 aa5.72□□□□□ -1.49
NEK3-209ENST00000618856 CRYBA4P53673 196 aa5.72□□□□□ -1.49
NEK3-209ENST00000618856 UBE2G1P62253 170 aa5.72□□□□□ -1.49
NEK3-209ENST00000618856 MEF2BQ02080 365 aaPredicted RBP5.72□□□□□ -1.49
NEK3-209ENST00000618856 SLAQ13239 276 aa5.72□□□□□ -1.49
NEK3-209ENST00000618856 OR5I1Q13606 314 aa5.72□□□□□ -1.49
NEK3-209ENST00000618856 FAM162BQ5T6X4 162 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms