RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 MUC21Q5SSG8 566 aa17.45■□□□□ 0.38
PMS1-220ENST00000618056 ATG101Q9BSB4 218 aa17.45■□□□□ 0.38
PMS1-220ENST00000618056 NKX6-2Q9C056 277 aaPredicted RBP17.45■□□□□ 0.38
PMS1-220ENST00000618056 A0A1B0GV50 99 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 FBLL1A6NHQ2 334 aaKnown RBP17.44■□□□□ 0.38
PMS1-220ENST00000618056 IGLV2-11P01706 119 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 ZNF415Q09FC8 603 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 LGALS9BQ3B8N2 356 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 RNF212Q495C1 297 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 FAM159AQ6UWV7 190 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 TMEM75Q8N9X5 138 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 SGK494Q96LW2 274 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 NDFIP1Q9BT67 221 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 TRGV1A0A0A0MS02 117 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 TRAV21A0A0B4J279 112 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 PEA15Q15121 130 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 SFT2D1Q8WV19 159 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 PSG8Q9UQ74 426 aa17.44■□□□□ 0.38
PMS1-220ENST00000618056 TRGV2A0A075B6R0 118 aa17.43■□□□□ 0.38
PMS1-220ENST00000618056 FAM74A7A6NL05 159 aa17.43■□□□□ 0.38
PMS1-220ENST00000618056 FLI1Q01543 452 aaPredicted RBP17.43■□□□□ 0.38
PMS1-220ENST00000618056 TRGV11A0A075B6L2 103 aa17.42■□□□□ 0.38
PMS1-220ENST00000618056 TRAV1-1A0A0B4J248 108 aa17.42■□□□□ 0.38
PMS1-220ENST00000618056 F6UZH7 168 aa17.42■□□□□ 0.38
PMS1-220ENST00000618056 HOXA5P20719 270 aa17.42■□□□□ 0.38
PMS1-220ENST00000618056 UBE2G2P60604 165 aa17.42■□□□□ 0.38
PMS1-220ENST00000618056 UBE2DNLQ8IWF7 75 aa17.42■□□□□ 0.38
PMS1-220ENST00000618056 EIF5A2Q9GZV4 153 aaKnown RBP17.42■□□□□ 0.38
PMS1-220ENST00000618056 F8W036 122 aa17.41■□□□□ 0.38
PMS1-220ENST00000618056 APOC3P02656 99 aa17.41■□□□□ 0.38
PMS1-220ENST00000618056 OR5I1Q13606 314 aa17.41■□□□□ 0.38
PMS1-220ENST00000618056 TMEM183BQ1AE95 376 aa17.41■□□□□ 0.38
PMS1-220ENST00000618056 TMEM183AQ8IXX5 376 aa17.41■□□□□ 0.38
PMS1-220ENST00000618056 MBD3L1Q8WWY6 194 aa17.41■□□□□ 0.38
PMS1-220ENST00000618056 MDFICQ9P1T7 246 aa17.41■□□□□ 0.38
PMS1-220ENST00000618056 TRAV26-1A0A087WT03 109 aa17.39■□□□□ 0.37
PMS1-220ENST00000618056 H3BNG1 76 aa17.39■□□□□ 0.37
PMS1-220ENST00000618056 NUDT3O95989 172 aa17.39■□□□□ 0.37
PMS1-220ENST00000618056 SFTA3P0C7M3 94 aa17.39■□□□□ 0.37
PMS1-220ENST00000618056 C8orf49Q96NF6 230 aa17.39■□□□□ 0.37
PMS1-220ENST00000618056 SPXQ9BT56 116 aa17.39■□□□□ 0.37
PMS1-220ENST00000618056 SEC11CQ9BY50 192 aa17.39■□□□□ 0.37
PMS1-220ENST00000618056 NAGKQ9UJ70 344 aa17.39■□□□□ 0.37
PMS1-220ENST00000618056 ADCYAP1P18509 176 aa17.38■□□□□ 0.37
PMS1-220ENST00000618056 FAM3BP58499 235 aaPredicted RBP17.38■□□□□ 0.37
PMS1-220ENST00000618056 CCL20P78556 96 aa17.38■□□□□ 0.37
PMS1-220ENST00000618056 PRNTQ86SH4 94 aa17.38■□□□□ 0.37
PMS1-220ENST00000618056 HIST1H2BAQ96A08 127 aa17.38■□□□□ 0.37
PMS1-220ENST00000618056 KCNS1Q96KK3 526 aa17.38■□□□□ 0.37
PMS1-220ENST00000618056 SMDT1Q9H4I9 107 aa17.38■□□□□ 0.37
PMS1-220ENST00000618056 MRPL16Q9NX20 251 aaKnown RBP17.38■□□□□ 0.37
PMS1-220ENST00000618056 CARHSP1Q9Y2V2 147 aaKnown RBP17.38■□□□□ 0.37
PMS1-220ENST00000618056 ARL2-SNX15V9GYD0 113 aa17.38■□□□□ 0.37
PMS1-220ENST00000618056 PEX7O00628 323 aa17.37■□□□□ 0.37
PMS1-220ENST00000618056 SAPCD1Q5SSQ6 148 aa17.37■□□□□ 0.37
PMS1-220ENST00000618056 C10orf91Q5T1B1 145 aa17.37■□□□□ 0.37
PMS1-220ENST00000618056 RBFOX3A6NFN3 312 aa17.37■□□□□ 0.37
PMS1-220ENST00000618056 GCGP01275 180 aa17.37■□□□□ 0.37
PMS1-220ENST00000618056 ZNF80P51504 273 aaPredicted RBP17.37■□□□□ 0.37
PMS1-220ENST00000618056 SMUG1Q53HV7 270 aa17.37■□□□□ 0.37
PMS1-220ENST00000618056 LINC00479Q96M42 142 aa17.37■□□□□ 0.37
PMS1-220ENST00000618056 TCEAL7Q9BRU2 100 aa17.37■□□□□ 0.37
PMS1-220ENST00000618056 PPT1P50897 306 aa17.36■□□□□ 0.37
PMS1-220ENST00000618056 SVBPQ8N300 66 aa17.36■□□□□ 0.37
PMS1-220ENST00000618056 RASL10AQ92737 203 aa17.36■□□□□ 0.37
PMS1-220ENST00000618056 SDF2L1Q9HCN8 221 aa17.36■□□□□ 0.37
PMS1-220ENST00000618056 IGHV3-16A0A0C4DH30 117 aa17.35■□□□□ 0.37
PMS1-220ENST00000618056 GNRH2O43555 120 aa17.35■□□□□ 0.37
PMS1-220ENST00000618056 SCO1O75880 301 aa17.35■□□□□ 0.37
PMS1-220ENST00000618056 IFNA1P01562 189 aa17.35■□□□□ 0.37
PMS1-220ENST00000618056 TYMSP04818 313 aa17.35■□□□□ 0.37
PMS1-220ENST00000618056 PFN1P07737 140 aaKnown RBP17.35■□□□□ 0.37
PMS1-220ENST00000618056 ZNF506Q5JVG8 444 aa17.35■□□□□ 0.37
PMS1-220ENST00000618056 BIRC6Q9NR09 4857 aa17.35■□□□□ 0.37
PMS1-220ENST00000618056 TRAV34A0A0B4J273 112 aa17.34■□□□□ 0.37
PMS1-220ENST00000618056 A0A0J9YY99 117 aa17.34■□□□□ 0.37
PMS1-220ENST00000618056 C9JQL5 133 aa17.34■□□□□ 0.37
PMS1-220ENST00000618056 GNG13Q9P2W3 67 aa17.33■□□□□ 0.37
PMS1-220ENST00000618056 C11orf21Q9P2W6 132 aa17.33■□□□□ 0.37
PMS1-220ENST00000618056 CCL18P55774 89 aa17.32■□□□□ 0.36
PMS1-220ENST00000618056 Q86TA4 180 aa17.32■□□□□ 0.36
PMS1-220ENST00000618056 VSIG2Q96IQ7 327 aa17.32■□□□□ 0.36
PMS1-220ENST00000618056 DNAH2Q9P225 4427 aa17.32■□□□□ 0.36
PMS1-220ENST00000618056 BCL2P10415 239 aa17.31■□□□□ 0.36
PMS1-220ENST00000618056 CST9LP1Q5W188 147 aa17.31■□□□□ 0.36
PMS1-220ENST00000618056 M0R2P5 195 aa17.31■□□□□ 0.36
PMS1-220ENST00000618056 PAGE4O60829 102 aa17.31■□□□□ 0.36
PMS1-220ENST00000618056 SNAPINO95295 136 aa17.31■□□□□ 0.36
PMS1-220ENST00000618056 FMC1Q96HJ9 113 aa17.31■□□□□ 0.36
PMS1-220ENST00000618056 IGHV3-53P01767 116 aa17.3■□□□□ 0.36
PMS1-220ENST00000618056 SLAQ13239 276 aa17.3■□□□□ 0.36
PMS1-220ENST00000618056 COX8CQ7Z4L0 72 aa17.3■□□□□ 0.36
PMS1-220ENST00000618056 LINC00588Q9Y4M8 146 aa17.3■□□□□ 0.36
PMS1-220ENST00000618056 TRBV6-1A0A0K0K1D8 114 aa17.29■□□□□ 0.36
PMS1-220ENST00000618056 FHL2Q14192 279 aa17.29■□□□□ 0.36
PMS1-220ENST00000618056 Q6ZR54 194 aa17.29■□□□□ 0.36
PMS1-220ENST00000618056 PRO0255Q9UI72 69 aa17.29■□□□□ 0.36
PMS1-220ENST00000618056 ZFP30Q9Y2G7 519 aa17.29■□□□□ 0.36
PMS1-220ENST00000618056 IGLV2-18A0A075B6J9 118 aa17.28■□□□□ 0.36
PMS1-220ENST00000618056 TAGLN2P37802 199 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms