RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 PLA2G10O15496 165 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 RSPO1Q2MKA7 263 aaPredicted RBP8.43□□□□□ -1.06
POLR2A-209ENST00000617998 ERASQ7Z444 233 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 ZNF48Q96MX3 618 aaPredicted RBP8.43□□□□□ -1.06
POLR2A-209ENST00000617998 VWC2LB2RUY7 222 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 DNLZQ5SXM8 178 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 WWC2-AS2Q96NR7 200 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 NCKAP5O14513 1909 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 G3V4G9 280 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 PRIMA1Q86XR5 153 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 LY6G5BQ8NDX9 201 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 TRAV8-3A0A0A6YYJ7 113 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 IGLV1-47P01700 117 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 SLC17A3O00476 420 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 K7EQD1 137 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 HBDP02042 147 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 GAGE2EQ4V326 116 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 LY6G6FQ5SQ64 297 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 OR10D4PQ8NGN7 298 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 GAGE2DQ9UEU5 116 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 SIVA1O15304 175 aa8.42□□□□□ -1.06
POLR2A-209ENST00000617998 NANOS2P60321 138 aaKnown RBP8.42□□□□□ -1.06
POLR2A-209ENST00000617998 IGLC1P0CG04 106 aa8.41□□□□□ -1.06
POLR2A-209ENST00000617998 PUSL1Q8N0Z8 303 aaKnown RBP8.41□□□□□ -1.06
POLR2A-209ENST00000617998 NXPH4O95158 308 aa8.41□□□□□ -1.06
POLR2A-209ENST00000617998 ZNF114Q8NC26 417 aa8.41□□□□□ -1.06
POLR2A-209ENST00000617998 RNASE7Q9H1E1 156 aaKnown RBP8.41□□□□□ -1.06
POLR2A-209ENST00000617998 J3QRE1 110 aa8.41□□□□□ -1.06
POLR2A-209ENST00000617998 PFN2P35080 140 aa8.41□□□□□ -1.06
POLR2A-209ENST00000617998 RPL24P83731 157 aaKnown RBP8.41□□□□□ -1.06
POLR2A-209ENST00000617998 LAGE3Q14657 143 aa8.41□□□□□ -1.06
POLR2A-209ENST00000617998 C1orf134Q5TEV5 83 aa8.41□□□□□ -1.06
POLR2A-209ENST00000617998 TMEM263Q8WUH6 116 aaKnown RBP8.41□□□□□ -1.06
POLR2A-209ENST00000617998 IGLV11-55A0A075B6I3 123 aa8.4□□□□□ -1.06
POLR2A-209ENST00000617998 TRBV19A0A075B6N1 114 aa8.4□□□□□ -1.06
POLR2A-209ENST00000617998 ODF3BA8MYP8 253 aa8.4□□□□□ -1.06
POLR2A-209ENST00000617998 PLNP26678 52 aa8.4□□□□□ -1.06
POLR2A-209ENST00000617998 FSTL3O95633 263 aa8.4□□□□□ -1.06
POLR2A-209ENST00000617998 C16orf54Q6UWD8 224 aa8.4□□□□□ -1.06
POLR2A-209ENST00000617998 Q6ZNX1 250 aa8.4□□□□□ -1.06
POLR2A-209ENST00000617998 RITA1Q96K30 269 aa8.4□□□□□ -1.06
POLR2A-209ENST00000617998 IGKV1-6A0A0C4DH72 117 aa8.4□□□□□ -1.06
POLR2A-209ENST00000617998 TRBV12-3P01733 135 aa8.4□□□□□ -1.06
POLR2A-209ENST00000617998 TRGC2P03986 189 aa8.4□□□□□ -1.06
POLR2A-209ENST00000617998 TRBV9A0A0B4J1U6 114 aa8.4□□□□□ -1.07
POLR2A-209ENST00000617998 PARD6GQ9BYG4 376 aaPredicted RBP8.4□□□□□ -1.07
POLR2A-209ENST00000617998 ANKRD11Q6UB99 2663 aaPredicted RBP8.4□□□□□ -1.07
POLR2A-209ENST00000617998 FLNBO75369 2602 aaKnown RBP8.4□□□□□ -1.07
POLR2A-209ENST00000617998 IGLC7A0M8Q6 106 aa8.4□□□□□ -1.07
POLR2A-209ENST00000617998 HLA-DRB4P13762 266 aa8.4□□□□□ -1.07
POLR2A-209ENST00000617998 CHTOPQ9Y3Y2 248 aaKnown RBP8.4□□□□□ -1.07
POLR2A-209ENST00000617998 HLA-DRB4X5D2U9 266 aa8.4□□□□□ -1.07
POLR2A-209ENST00000617998 DYSFO75923 2080 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 GATD1Q8NB37 220 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 SMIM2Q9BVW6 85 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 PKD1L2Q7Z442 2459 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 KIR2DL5BA0A0G2JN68 375 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 KIR2DL5BA0A0G2JPC4 375 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 LGALS9O00182 355 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 SNRPEP62304 92 aaKnown RBP8.39□□□□□ -1.07
POLR2A-209ENST00000617998 KIR2DL5AQ8N109 375 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 KIR2DL5BQ8NHK3 375 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 MRPL36Q9P0J6 103 aaKnown RBP8.39□□□□□ -1.07
POLR2A-209ENST00000617998 EPG5Q9HCE0 2579 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 IZUMO1RA6ND01 250 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 SDHCQ99643 169 aaPredicted RBP8.39□□□□□ -1.07
POLR2A-209ENST00000617998 NCR2O95944 276 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 M0R143 59 aa8.39□□□□□ -1.07
POLR2A-209ENST00000617998 PMVKQ15126 192 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 IGHV4-28A0A0C4DH34 117 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 C20orf144Q9BQM9 153 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 SNHG12Q9BXW3 62 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 HEATR5AQ86XA9 2040 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 TLN1Q9Y490 2541 aaKnown RBP8.38□□□□□ -1.07
POLR2A-209ENST00000617998 C16orf95Q9H693 158 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 TMEM242Q9NWH2 141 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 ETDCA0A1B0GVM5 59 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 AVPP01185 164 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 SMIM13P0DJ93 91 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 C10orf99Q6UWK7 81 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 LAMTOR3Q9UHA4 124 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 ADAMTS20P59510 1910 aa8.38□□□□□ -1.07
POLR2A-209ENST00000617998 STAG3L2P0CL84 134 aa8.37□□□□□ -1.07
POLR2A-209ENST00000617998 VSIG2Q96IQ7 327 aa8.37□□□□□ -1.07
POLR2A-209ENST00000617998 DENND4CQ5VZ89 1909 aa8.37□□□□□ -1.07
POLR2A-209ENST00000617998 STAG3L3P0CL85 134 aa8.37□□□□□ -1.07
POLR2A-209ENST00000617998 TMEM14EPQ6UXP3 125 aa8.37□□□□□ -1.07
POLR2A-209ENST00000617998 CTSGP08311 255 aa8.37□□□□□ -1.07
POLR2A-209ENST00000617998 DYNAPQ8N1N2 210 aa8.37□□□□□ -1.07
POLR2A-209ENST00000617998 FHL1Q13642 323 aa8.36□□□□□ -1.07
POLR2A-209ENST00000617998 TMEM75Q8N9X5 138 aa8.36□□□□□ -1.07
POLR2A-209ENST00000617998 MYMXA0A1B0GTQ4 84 aa8.36□□□□□ -1.07
POLR2A-209ENST00000617998 NPC2P61916 151 aa8.36□□□□□ -1.07
POLR2A-209ENST00000617998 POLQO75417 2590 aa8.36□□□□□ -1.07
POLR2A-209ENST00000617998 TRAV2A0A0B4J234 112 aa8.36□□□□□ -1.07
POLR2A-209ENST00000617998 FABP2P12104 132 aa8.36□□□□□ -1.07
POLR2A-209ENST00000617998 ORAOV1Q8WV07 137 aa8.36□□□□□ -1.07
POLR2A-209ENST00000617998 RETNQ9HD89 108 aa8.36□□□□□ -1.07
POLR2A-209ENST00000617998 COX7A2LO14548 114 aa8.36□□□□□ -1.07
POLR2A-209ENST00000617998 RPL23P62829 140 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms