RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 TYMSP04818 313 aa15.14■□□□□ 0.01
NEDD4L-237ENST00000617539 ATP6V0CP27449 155 aa15.14■□□□□ 0.01
NEDD4L-237ENST00000617539 NEGR1Q7Z3B1 354 aa15.14■□□□□ 0.01
NEDD4L-237ENST00000617539 RAB24Q969Q5 203 aa15.14■□□□□ 0.01
NEDD4L-237ENST00000617539 PSMG3Q9BT73 122 aaPredicted RBP15.14■□□□□ 0.01
NEDD4L-237ENST00000617539 SH3BGRL3Q9H299 93 aa15.14■□□□□ 0.01
NEDD4L-237ENST00000617539 TNFRSF18Q9Y5U5 241 aa15.14■□□□□ 0.01
NEDD4L-237ENST00000617539 GCHFRP30047 84 aa15.13■□□□□ 0.01
NEDD4L-237ENST00000617539 MED28Q9H204 178 aa15.13■□□□□ 0.01
NEDD4L-237ENST00000617539 TRAV4A0A0B4J268 109 aa15.12■□□□□ 0.01
NEDD4L-237ENST00000617539 M0R2P5 195 aa15.12■□□□□ 0.01
NEDD4L-237ENST00000617539 GYPEP15421 78 aa15.12■□□□□ 0.01
NEDD4L-237ENST00000617539 ZNF80P51504 273 aaPredicted RBP15.12■□□□□ 0.01
NEDD4L-237ENST00000617539 C11orf21Q9P2W6 132 aa15.12■□□□□ 0.01
NEDD4L-237ENST00000617539 GGTLC3B5MD39 225 aa15.11■□□□□ 0.01
NEDD4L-237ENST00000617539 IGLV2-11P01706 119 aa15.11■□□□□ 0.01
NEDD4L-237ENST00000617539 TCRAP04437 139 aa15.11■□□□□ 0.01
NEDD4L-237ENST00000617539 SRIP30626 198 aa15.11■□□□□ 0.01
NEDD4L-237ENST00000617539 WFDC10BQ8IUB3 73 aa15.11■□□□□ 0.01
NEDD4L-237ENST00000617539 C5orf17Q8NAS9 161 aa15.11■□□□□ 0.01
NEDD4L-237ENST00000617539 LOC100131303A0A0U1RQF7 123 aa15.1■□□□□ 0.01
NEDD4L-237ENST00000617539 OR4C5Q8NGB2 326 aa15.1■□□□□ 0.01
NEDD4L-237ENST00000617539 SDF2L1Q9HCN8 221 aa15.1■□□□□ 0.01
NEDD4L-237ENST00000617539 SERTM2A0A1B0GWG4 89 aa15.09■□□□□ 0.01
NEDD4L-237ENST00000617539 RNF222A6NCQ9 220 aa15.09■□□□□ 0.01
NEDD4L-237ENST00000617539 ORM1P02763 201 aa15.09■□□□□ 0.01
NEDD4L-237ENST00000617539 SERF2P84101 59 aa15.09■□□□□ 0.01
NEDD4L-237ENST00000617539 MAPKAPK5-AS1Q8N8E1 139 aa15.09■□□□□ 0.01
NEDD4L-237ENST00000617539 ASB13Q8WXK3 278 aa15.09■□□□□ 0.01
NEDD4L-237ENST00000617539 GIPP09681 153 aaPredicted RBP15.08■□□□□ 0
NEDD4L-237ENST00000617539 PCNPQ8WW12 178 aaKnown RBP15.08■□□□□ 0
NEDD4L-237ENST00000617539 KCNS1Q96KK3 526 aa15.08■□□□□ 0
NEDD4L-237ENST00000617539 C9JCJ5 164 aa15.07■□□□□ 0
NEDD4L-237ENST00000617539 MBP02144 154 aa15.07■□□□□ 0
NEDD4L-237ENST00000617539 RPL7L1Q6DKI1 246 aaKnown RBP15.07■□□□□ 0
NEDD4L-237ENST00000617539 TMEM75Q8N9X5 138 aa15.07■□□□□ 0
NEDD4L-237ENST00000617539 PSG8Q9UQ74 426 aa15.07■□□□□ 0
NEDD4L-237ENST00000617539 LY96Q9Y6Y9 160 aa15.07■□□□□ 0
NEDD4L-237ENST00000617539 CXorf1O96002 111 aa15.06■□□□□ 0
NEDD4L-237ENST00000617539 GCGP01275 180 aa15.06■□□□□ 0
NEDD4L-237ENST00000617539 GATA1P15976 413 aaPredicted RBP15.06■□□□□ 0
NEDD4L-237ENST00000617539 FUSP35637 526 aaKnown RBP eCLIP15.06■□□□□ 03e-12■□□□□ 9.5
NEDD4L-237ENST00000617539 SUMO1P63165 101 aaKnown RBP15.06■□□□□ 0
NEDD4L-237ENST00000617539 ZNF726P1Q15940 193 aa15.06■□□□□ 0
NEDD4L-237ENST00000617539 DPPA3Q6W0C5 159 aa15.06■□□□□ 0
NEDD4L-237ENST00000617539 NDFIP1Q9BT67 221 aa15.06■□□□□ 0
NEDD4L-237ENST00000617539 EPDR1Q9UM22 224 aa15.06■□□□□ 0
NEDD4L-237ENST00000617539 TNFSF18Q9UNG2 199 aa15.06■□□□□ 0
NEDD4L-237ENST00000617539 DNAH10OSP0CZ25 163 aa15.05■□□□□ -0
NEDD4L-237ENST00000617539 TXNDC17Q9BRA2 123 aa15.05■□□□□ -0
NEDD4L-237ENST00000617539 ACTR3CQ9C0K3 210 aaPredicted RBP15.05■□□□□ -0
NEDD4L-237ENST00000617539 TMEM167BQ9NRX6 74 aa15.05■□□□□ -0
NEDD4L-237ENST00000617539 PFN1P07737 140 aaKnown RBP15.04■□□□□ -0
NEDD4L-237ENST00000617539 FLI1Q01543 452 aaPredicted RBP15.04■□□□□ -0
NEDD4L-237ENST00000617539 CYB561D1Q8N8Q1 229 aa15.04■□□□□ -0
NEDD4L-237ENST00000617539 C9orf85Q96MD7 179 aa15.04■□□□□ -0
NEDD4L-237ENST00000617539 G3V3Q6 166 aa15.03■□□□□ -0
NEDD4L-237ENST00000617539 K7EQM0 130 aa15.03■□□□□ -0
NEDD4L-237ENST00000617539 ZNF876PQ49A33 203 aa15.03■□□□□ -0
NEDD4L-237ENST00000617539 PRNTQ86SH4 94 aa15.03■□□□□ -0
NEDD4L-237ENST00000617539 LINC00479Q96M42 142 aa15.03■□□□□ -0
NEDD4L-237ENST00000617539 FXYD6-FXYD2A0A087WZ82 144 aa15.02■□□□□ -0
NEDD4L-237ENST00000617539 TAAR5O14804 337 aa15.02■□□□□ -0
NEDD4L-237ENST00000617539 CFAP126Q5VTH2 177 aa15.02■□□□□ -0
NEDD4L-237ENST00000617539 NFE4Q86UQ8 179 aa15.02■□□□□ -0
NEDD4L-237ENST00000617539 Q8N1X5 172 aa15.02■□□□□ -0
NEDD4L-237ENST00000617539 SLC25A29Q8N8R3 303 aa15.02■□□□□ -0
NEDD4L-237ENST00000617539 INO80EQ8NBZ0 244 aaPredicted RBP15.02■□□□□ -0
NEDD4L-237ENST00000617539 TRAV9-2A0A087WT02 112 aa15.01□□□□□ -0.01
NEDD4L-237ENST00000617539 FBLL1A6NHQ2 334 aaKnown RBP15.01□□□□□ -0.01
NEDD4L-237ENST00000617539 RS1O15537 224 aa15.01□□□□□ -0.01
NEDD4L-237ENST00000617539 RNASE3P12724 160 aaKnown RBP15.01□□□□□ -0.01
NEDD4L-237ENST00000617539 ERVFC1-1P60608 527 aa15.01□□□□□ -0.01
NEDD4L-237ENST00000617539 SMUG1Q53HV7 270 aa15.01□□□□□ -0.01
NEDD4L-237ENST00000617539 MSRB1Q9NZV6 116 aa15.01□□□□□ -0.01
NEDD4L-237ENST00000617539 TRAV34A0A0B4J273 112 aa15□□□□□ -0.01
NEDD4L-237ENST00000617539 A0A1W2PRE2 83 aa15□□□□□ -0.01
NEDD4L-237ENST00000617539 PGPEP1LA6NFU8 196 aa15□□□□□ -0.01
NEDD4L-237ENST00000617539 K7EP13 123 aa15□□□□□ -0.01
NEDD4L-237ENST00000617539 TIRAPP58753 221 aa15□□□□□ -0.01
NEDD4L-237ENST00000617539 NHLRC2Q8NBF2 726 aa15□□□□□ -0.01
NEDD4L-237ENST00000617539 OR2T35Q8NGX2 323 aa15□□□□□ -0.01
NEDD4L-237ENST00000617539 A0A087WTM6 91 aa14.99□□□□□ -0.01
NEDD4L-237ENST00000617539 BORCS7-ASMTA0A0B4J1R7 106 aa14.99□□□□□ -0.01
NEDD4L-237ENST00000617539 IGHV3-73A0A0B4J1V6 119 aa14.99□□□□□ -0.01
NEDD4L-237ENST00000617539 EVI2AP22794 236 aa14.99□□□□□ -0.01
NEDD4L-237ENST00000617539 ZFP69Q49AA0 526 aa14.99□□□□□ -0.01
NEDD4L-237ENST00000617539 ZNF506Q5JVG8 444 aa14.99□□□□□ -0.01
NEDD4L-237ENST00000617539 SH2D6Q7Z4S9 175 aa14.99□□□□□ -0.01
NEDD4L-237ENST00000617539 IGKV3D-20A0A0C4DH25 116 aa14.98□□□□□ -0.01
NEDD4L-237ENST00000617539 CTXND1A0A1B0GTU2 59 aa14.98□□□□□ -0.01
NEDD4L-237ENST00000617539 PTH2Q96A98 100 aa14.98□□□□□ -0.01
NEDD4L-237ENST00000617539 PGPEP1Q9NXJ5 209 aa14.98□□□□□ -0.01
NEDD4L-237ENST00000617539 TRBV6-4A0A1B0GX49 114 aa14.97□□□□□ -0.01
NEDD4L-237ENST00000617539 CRYGDP07320 174 aa14.97□□□□□ -0.01
NEDD4L-237ENST00000617539 FGF8P55075 233 aaPredicted RBP14.97□□□□□ -0.01
NEDD4L-237ENST00000617539 UBE2G2P60604 165 aa14.97□□□□□ -0.01
NEDD4L-237ENST00000617539 SAPCD1Q5SSQ6 148 aa14.97□□□□□ -0.01
NEDD4L-237ENST00000617539 SCRT2Q9NQ03 307 aa14.97□□□□□ -0.01
NEDD4L-237ENST00000617539 ARL2-SNX15V9GYD0 113 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms