RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 C9orf85Q96MD7 179 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 MTFP1Q9UDX5 166 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 SMIM8Q96KF7 97 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 PSMG3-AS1Q96PY0 264 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 PMCHL2Q9BQD1 86 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 RPP21Q9H633 154 aaKnown RBP2.6□□□□□ -1.99
LPP-220ENST00000617246 A6NDX4 124 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 EGR2P11161 476 aaPredicted RBP2.6□□□□□ -1.99
LPP-220ENST00000617246 BAP18Q8IXM2 172 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 ZNF837Q96EG3 531 aaPredicted RBP2.6□□□□□ -1.99
LPP-220ENST00000617246 KLHDC2Q9Y2U9 406 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 ACACAQ13085 2346 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 LY6G5BQ8NDX9 201 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 PGLYRP1O75594 196 aaPredicted RBP2.6□□□□□ -1.99
LPP-220ENST00000617246 SP6Q3SY56 376 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 FAM222AQ5U5X8 452 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 FAM19A1Q7Z5A9 133 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 APRG1Q8IVJ8 170 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 IGHV3-38A0A0C4DH36 116 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 PAGE4O60829 102 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 SPAG11BQ08648 103 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 LINC01006Q8NI28 216 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 UBE2V2Q15819 145 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 RBAKDNA6NC62 111 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 TMEM50AO95807 157 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 ZNF79Q15937 498 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 FAAP20Q6NZ36 180 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 KIAA0040Q15053 153 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 E7EUB6 86 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 SMIM13P0DJ93 91 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 CCL1P22362 96 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 MUC6Q6W4X9 2439 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 TMEM136Q6ZRR5 245 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 ZAR1Q86SH2 424 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 PTPRZ1P23471 2315 aaPredicted RBP2.6□□□□□ -1.99
LPP-220ENST00000617246 A0A087WWL8 130 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 TRBV6-7A0A0A0MS04 114 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 A0A087WZ39 114 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 BVES-AS1Q5T3Y7 98 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 ZNF492Q9P255 531 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 CDC42EP2O14613 210 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 B3GALT5-AS1P59052 145 aa2.6□□□□□ -1.99
LPP-220ENST00000617246 IGKV1-17P01599 117 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 U3KQE9 123 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 FREM1Q5H8C1 2179 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 G3V318 75 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 IGKV1-6A0A0C4DH72 117 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 FOXL2NBQ6ZUU3 175 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 MSRB1Q9NZV6 116 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 HMSDA8MTL9 139 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 PAX2Q02962 417 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 PARLQ9H300 379 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 PCP2Q8IVA1 136 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 NPBQ8NG41 125 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 TRAV26-1A0A087WT03 109 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 H7C2G1 150 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 NDUFS7O75251 213 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 GZMMP51124 257 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 IGKV1D-17A0A075B6S4 117 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 F8WDY8 70 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 IGHV3-48P01763 117 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 LOC107984156A0A0G2JMH3 177 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 A0A1W2PRE2 83 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 PMCHL1Q16048 86 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 ARL17AQ8IVW1 177 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 A0A1B0GV90 55 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 HLA-DRB4P13762 266 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 CEMP1Q6PRD7 247 aaPredicted RBP2.59□□□□□ -1.99
LPP-220ENST00000617246 HLA-DRB4X5D2U9 266 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 TNCP24821 2201 aa2.59□□□□□ -1.99
LPP-220ENST00000617246 IGKV1-12A0A0C4DH73 117 aa2.59□□□□□ -2
LPP-220ENST00000617246 NUPR1O60356 82 aa2.59□□□□□ -2
LPP-220ENST00000617246 LEPROTL1O95214 131 aa2.59□□□□□ -2
LPP-220ENST00000617246 SNRPEP62304 92 aaKnown RBP2.59□□□□□ -2
LPP-220ENST00000617246 GTSF1LQ9H1H1 148 aa2.59□□□□□ -2
LPP-220ENST00000617246 RPL37AP61513 92 aaKnown RBP2.59□□□□□ -2
LPP-220ENST00000617246 CREBBPQ92793 2442 aa2.59□□□□□ -2
LPP-220ENST00000617246 IGLV4-69A0A075B6H9 119 aa2.59□□□□□ -2
LPP-220ENST00000617246 TRAV9-1A0A075B6T8 112 aa2.59□□□□□ -2
LPP-220ENST00000617246 MPZP25189 248 aa2.59□□□□□ -2
LPP-220ENST00000617246 BTCP35070 178 aa2.59□□□□□ -2
LPP-220ENST00000617246 C11orf71Q6IPW1 123 aa2.59□□□□□ -2
LPP-220ENST00000617246 LGALS9BQ3B8N2 356 aa2.59□□□□□ -2
LPP-220ENST00000617246 AMTNQ6UX39 209 aa2.59□□□□□ -2
LPP-220ENST00000617246 PRR14LQ5THK1 2151 aa2.59□□□□□ -2
LPP-220ENST00000617246 CENPWQ5EE01 88 aa2.59□□□□□ -2
LPP-220ENST00000617246 EPM2AB3EWF7 344 aa2.58□□□□□ -2
LPP-220ENST00000617246 HGFACQ04756 655 aa2.58□□□□□ -2
LPP-220ENST00000617246 SLC25A29Q8N8R3 303 aa2.58□□□□□ -2
LPP-220ENST00000617246 TMEM141Q96I45 108 aa2.58□□□□□ -2
LPP-220ENST00000617246 GPR146Q96CH1 333 aa2.58□□□□□ -2
LPP-220ENST00000617246 TRBV6-6A0A0A6YYG2 114 aa2.58□□□□□ -2
LPP-220ENST00000617246 KNCNA6PVL3 124 aa2.58□□□□□ -2
LPP-220ENST00000617246 RPL29P47914 159 aaKnown RBP2.58□□□□□ -2
LPP-220ENST00000617246 TMEM170AQ8WVE7 144 aa2.58□□□□□ -2
LPP-220ENST00000617246 SMPXQ9UHP9 88 aa2.58□□□□□ -2
LPP-220ENST00000617246 K7EMI3 77 aa2.58□□□□□ -2
LPP-220ENST00000617246 ATXN8Q156A1 80 aa2.58□□□□□ -2
LPP-220ENST00000617246 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.58□□□□□ -2
LPP-220ENST00000617246 ZDBF2Q9HCK1 2354 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms