RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 F8VRH5 84 aa13.31□□□□□ -0.28
DDX1-207ENST00000617198 H7C1H1 209 aa13.31□□□□□ -0.28
DDX1-207ENST00000617198 ORMDL2Q53FV1 153 aa13.3□□□□□ -0.28
DDX1-207ENST00000617198 LINC00477Q96M19 166 aa13.3□□□□□ -0.28
DDX1-207ENST00000617198 TRAV41A0A0B4J266 112 aa13.3□□□□□ -0.28
DDX1-207ENST00000617198 FAM223BA6NKX1 122 aa13.3□□□□□ -0.28
DDX1-207ENST00000617198 E9PLD3 99 aa13.3□□□□□ -0.28
DDX1-207ENST00000617198 IGF1P05019 195 aa13.3□□□□□ -0.28
DDX1-207ENST00000617198 LMO4P61968 165 aa13.3□□□□□ -0.28
DDX1-207ENST00000617198 FAM223AQ8IWN6 122 aa13.3□□□□□ -0.28
DDX1-207ENST00000617198 M0R381 172 aa13.29□□□□□ -0.28
DDX1-207ENST00000617198 SUMO2P61956 95 aaKnown RBP13.29□□□□□ -0.28
DDX1-207ENST00000617198 ZFAND2AQ8N6M9 145 aa13.29□□□□□ -0.28
DDX1-207ENST00000617198 TRAV21A0A0B4J279 112 aa13.29□□□□□ -0.28
DDX1-207ENST00000617198 J3KRW8 73 aa13.29□□□□□ -0.28
DDX1-207ENST00000617198 K7EMI3 77 aa13.29□□□□□ -0.28
DDX1-207ENST00000617198 SLC25A16P16260 332 aa13.29□□□□□ -0.28
DDX1-207ENST00000617198 TMEM219Q86XT9 240 aa13.29□□□□□ -0.28
DDX1-207ENST00000617198 TOMM6Q96B49 74 aa13.29□□□□□ -0.28
DDX1-207ENST00000617198 SCGB3A1Q96QR1 104 aa13.29□□□□□ -0.28
DDX1-207ENST00000617198 MED13LQ71F56 2210 aa13.29□□□□□ -0.28
DDX1-207ENST00000617198 IGLL5B9A064 214 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 ARL3P36405 182 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 C19orf54Q5BKX5 351 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 OR10J6PQ8NGY7 276 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 RASL10AQ92737 203 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 HIST1H4GQ99525 98 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 C20orf78Q9BR46 151 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 BPESC1Q9GZL8 116 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 UBTD1Q9HAC8 227 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 SPTA1P02549 2419 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 S100A4P26447 101 aaKnown RBP13.28□□□□□ -0.28
DDX1-207ENST00000617198 C12orf74Q32Q52 190 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 KLK15Q9H2R5 256 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 DPH3P1Q9H4G8 78 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 LINC00527Q9UJ94 153 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 MOB4Q9Y3A3 225 aa13.28□□□□□ -0.28
DDX1-207ENST00000617198 CHTOPQ9Y3Y2 248 aaKnown RBP13.28□□□□□ -0.28
DDX1-207ENST00000617198 PTPRZ1P23471 2315 aaPredicted RBP13.27□□□□□ -0.28
DDX1-207ENST00000617198 CEP295Q9C0D2 2601 aa13.27□□□□□ -0.28
DDX1-207ENST00000617198 RPL24P83731 157 aaKnown RBP13.27□□□□□ -0.28
DDX1-207ENST00000617198 GPHB5Q86YW7 130 aa13.27□□□□□ -0.28
DDX1-207ENST00000617198 OVOL1O14753 267 aa13.27□□□□□ -0.29
DDX1-207ENST00000617198 ASIPP42127 132 aa13.27□□□□□ -0.29
DDX1-207ENST00000617198 FOXI2Q6ZQN5 318 aa13.27□□□□□ -0.29
DDX1-207ENST00000617198 ZNF479Q96JC4 524 aa13.27□□□□□ -0.29
DDX1-207ENST00000617198 CACNA1BQ00975 2339 aa13.26□□□□□ -0.29
DDX1-207ENST00000617198 TEX48A0A1B0GUV7 120 aa13.26□□□□□ -0.29
DDX1-207ENST00000617198 OR11H12B2RN74 326 aa13.26□□□□□ -0.29
DDX1-207ENST00000617198 CRIP2P52943 208 aaPredicted RBP13.26□□□□□ -0.29
DDX1-207ENST00000617198 UNQ9165/PRO28630Q6UXU0 137 aa13.26□□□□□ -0.29
DDX1-207ENST00000617198 NEXN-AS1Q8NBZ9 246 aa13.26□□□□□ -0.29
DDX1-207ENST00000617198 OR11H1Q8NG94 326 aa13.26□□□□□ -0.29
DDX1-207ENST00000617198 OR11H2Q8NH07 326 aa13.26□□□□□ -0.29
DDX1-207ENST00000617198 PHLDA3Q9Y5J5 127 aa13.26□□□□□ -0.29
DDX1-207ENST00000617198 MUC6Q6W4X9 2439 aa13.26□□□□□ -0.29
DDX1-207ENST00000617198 TRBV7-3A0A075B6L6 115 aa13.25□□□□□ -0.29
DDX1-207ENST00000617198 MYMXA0A1B0GTQ4 84 aa13.25□□□□□ -0.29
DDX1-207ENST00000617198 LINC01619G3V211 115 aa13.25□□□□□ -0.29
DDX1-207ENST00000617198 SPRY2O43597 315 aa13.25□□□□□ -0.29
DDX1-207ENST00000617198 C14orf178Q8N769 122 aaPredicted RBP13.25□□□□□ -0.29
DDX1-207ENST00000617198 RPL39LQ96EH5 51 aaKnown RBP13.25□□□□□ -0.29
DDX1-207ENST00000617198 SVEP1Q4LDE5 3571 aa13.25□□□□□ -0.29
DDX1-207ENST00000617198 SOCS3O14543 225 aa13.25□□□□□ -0.29
DDX1-207ENST00000617198 UCNP55089 124 aa13.25□□□□□ -0.29
DDX1-207ENST00000617198 NDUFA4O00483 81 aa13.24□□□□□ -0.29
DDX1-207ENST00000617198 ANXA2RQ3ZCQ2 193 aa13.24□□□□□ -0.29
DDX1-207ENST00000617198 F8W1H4 67 aa13.24□□□□□ -0.29
DDX1-207ENST00000617198 TRBV12-3P01733 135 aa13.24□□□□□ -0.29
DDX1-207ENST00000617198 MED14OSP0DP75 135 aa13.24□□□□□ -0.29
DDX1-207ENST00000617198 RAXQ9Y2V3 346 aa13.24□□□□□ -0.29
DDX1-207ENST00000617198 AGRNO00468 2067 aa13.23□□□□□ -0.29
DDX1-207ENST00000617198 C2orf66Q6UXQ4 117 aa13.23□□□□□ -0.29
DDX1-207ENST00000617198 ASH1LQ9NR48 2969 aaKnown RBP13.23□□□□□ -0.29
DDX1-207ENST00000617198 RNF223E7ERA6 249 aa13.23□□□□□ -0.29
DDX1-207ENST00000617198 MGPP08493 103 aa13.23□□□□□ -0.29
DDX1-207ENST00000617198 DEFB1P60022 68 aa13.23□□□□□ -0.29
DDX1-207ENST00000617198 BAALCQ8WXS3 180 aa13.23□□□□□ -0.29
DDX1-207ENST00000617198 FAM19A4Q96LR4 140 aa13.23□□□□□ -0.29
DDX1-207ENST00000617198 SPOCK3Q9BQ16 436 aa13.23□□□□□ -0.29
DDX1-207ENST00000617198 NBASA2RRP1 2371 aa13.22□□□□□ -0.29
DDX1-207ENST00000617198 IGHV3OR16-10A0A075B7F0 116 aa13.22□□□□□ -0.29
DDX1-207ENST00000617198 A0A1B0GWB2 263 aa13.22□□□□□ -0.29
DDX1-207ENST00000617198 RNASE4P34096 147 aaKnown RBP13.22□□□□□ -0.29
DDX1-207ENST00000617198 TMEM238C9JI98 176 aa13.21□□□□□ -0.29
DDX1-207ENST00000617198 PPP1R17O96001 155 aa13.21□□□□□ -0.29
DDX1-207ENST00000617198 RRN3P1Q2M238 152 aa13.21□□□□□ -0.29
DDX1-207ENST00000617198 WFDC2Q14508 124 aa13.2□□□□□ -0.3
DDX1-207ENST00000617198 APRG1Q8IVJ8 170 aa13.2□□□□□ -0.3
DDX1-207ENST00000617198 H3BMG7 143 aa13.2□□□□□ -0.3
DDX1-207ENST00000617198 GNRH2O43555 120 aa13.2□□□□□ -0.3
DDX1-207ENST00000617198 LGALS1P09382 135 aaKnown RBP13.2□□□□□ -0.3
DDX1-207ENST00000617198 RNASE3P12724 160 aaKnown RBP13.2□□□□□ -0.3
DDX1-207ENST00000617198 RPL11P62913 178 aaKnown RBP13.2□□□□□ -0.3
DDX1-207ENST00000617198 SPANXB1Q9NS25 103 aaPredicted RBP13.2□□□□□ -0.3
DDX1-207ENST00000617198 PRSS29PA6NIE9 313 aa13.19□□□□□ -0.3
DDX1-207ENST00000617198 F6UB75 175 aa13.19□□□□□ -0.3
DDX1-207ENST00000617198 CYSLTR1Q9Y271 337 aa13.19□□□□□ -0.3
DDX1-207ENST00000617198 IGHV1-69DA0A0B4J2H0 117 aa13.19□□□□□ -0.3
DDX1-207ENST00000617198 IGHV1-69P01742 117 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms