RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 PTPN13Q12923 2485 aa11.83□□□□□ -0.52
NR1H3-235ENST00000616973 A0A096LNJ9 63 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 SMKR1H3BMG3 65 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 IGLC3P0DOY3 106 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 SRD5A1P18405 259 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 ATOH7Q8N100 152 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 MS4A6AQ9H2W1 248 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 MAP1LC3AQ9H492 121 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 UQCR10Q9UDW1 63 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 OR4C46A6NHA9 309 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 KLLNB2CW77 178 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 NCR2O95944 276 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 HOXD3P31249 432 aaPredicted RBP11.82□□□□□ -0.52
NR1H3-235ENST00000616973 ODF3Q96PU9 254 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 SNHG12Q9BXW3 62 aa11.82□□□□□ -0.52
NR1H3-235ENST00000616973 H3BVH4 76 aa11.81□□□□□ -0.52
NR1H3-235ENST00000616973 K7EQG2 157 aa11.81□□□□□ -0.52
NR1H3-235ENST00000616973 M0R143 59 aa11.81□□□□□ -0.52
NR1H3-235ENST00000616973 PLA2G2AP14555 144 aa11.81□□□□□ -0.52
NR1H3-235ENST00000616973 SYNJ2BPP57105 145 aa11.81□□□□□ -0.52
NR1H3-235ENST00000616973 SPANXN1Q5VSR9 72 aa11.81□□□□□ -0.52
NR1H3-235ENST00000616973 WFDC11Q8NEX6 87 aa11.81□□□□□ -0.52
NR1H3-235ENST00000616973 MAP1AP78559 2803 aaPredicted RBP11.81□□□□□ -0.52
NR1H3-235ENST00000616973 POLQO75417 2590 aa11.81□□□□□ -0.52
NR1H3-235ENST00000616973 J3KRW8 73 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 EREGO14944 169 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 TNFRSF6BO95407 300 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 EVI2AP22794 236 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 RNASE4P34096 147 aaKnown RBP11.8□□□□□ -0.52
NR1H3-235ENST00000616973 ASIPP42127 132 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 ANXA2RQ3ZCQ2 193 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 DEFB125Q8N687 156 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 NXT2Q9NPJ8 142 aaKnown RBP11.8□□□□□ -0.52
NR1H3-235ENST00000616973 PRSS47A8MTI9 375 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 J3QKU1 62 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 HBDP02042 147 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 MAJINQ3KP22 176 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 LINC01545Q5VT33 79 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 WFDC3Q8IUB2 231 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 SCRT2Q9NQ03 307 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 SELENOKQ9Y6D0 94 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 TENM4Q6N022 2769 aa11.8□□□□□ -0.52
NR1H3-235ENST00000616973 SNRPD3P62318 126 aaKnown RBP11.79□□□□□ -0.52
NR1H3-235ENST00000616973 IGLL1P15814 213 aa11.78□□□□□ -0.52
NR1H3-235ENST00000616973 GAS8-AS1O95177 125 aa11.78□□□□□ -0.52
NR1H3-235ENST00000616973 LEPP41159 167 aa11.78□□□□□ -0.52
NR1H3-235ENST00000616973 NAV2Q8IVL1 2488 aa11.77□□□□□ -0.53
NR1H3-235ENST00000616973 S100A4P26447 101 aaKnown RBP11.77□□□□□ -0.53
NR1H3-235ENST00000616973 KIR3DS1Q14943 382 aa11.77□□□□□ -0.53
NR1H3-235ENST00000616973 OR2K2Q8NGT1 345 aa11.77□□□□□ -0.53
NR1H3-235ENST00000616973 MRAP2Q96G30 205 aa11.77□□□□□ -0.53
NR1H3-235ENST00000616973 DUX5Q96PT3 197 aa11.77□□□□□ -0.53
NR1H3-235ENST00000616973 ST20Q9HBF5 79 aa11.77□□□□□ -0.53
NR1H3-235ENST00000616973 A0A0J9YX75 114 aa11.76□□□□□ -0.53
NR1H3-235ENST00000616973 PSMG4Q5JS54 123 aa11.76□□□□□ -0.53
NR1H3-235ENST00000616973 Q8N8P6 123 aa11.76□□□□□ -0.53
NR1H3-235ENST00000616973 NRACQ8N912 160 aa11.76□□□□□ -0.53
NR1H3-235ENST00000616973 C4orf3Q8WVX3 66 aa11.76□□□□□ -0.53
NR1H3-235ENST00000616973 TIMM8BQ9Y5J9 83 aaPredicted RBP11.76□□□□□ -0.53
NR1H3-235ENST00000616973 ZNF688P0C7X2 276 aa11.76□□□□□ -0.53
NR1H3-235ENST00000616973 RNASE3P12724 160 aaKnown RBP11.76□□□□□ -0.53
NR1H3-235ENST00000616973 DOPEY2Q9Y3R5 2298 aa11.76□□□□□ -0.53
NR1H3-235ENST00000616973 IGLV2-18A0A075B6J9 118 aa11.75□□□□□ -0.53
NR1H3-235ENST00000616973 LINC01619G3V211 115 aa11.75□□□□□ -0.53
NR1H3-235ENST00000616973 NXPH4O95158 308 aa11.75□□□□□ -0.53
NR1H3-235ENST00000616973 GATA1P15976 413 aaPredicted RBP11.75□□□□□ -0.53
NR1H3-235ENST00000616973 TFPI2P48307 235 aa11.75□□□□□ -0.53
NR1H3-235ENST00000616973 HIST2H2BCQ6DN03 193 aa11.75□□□□□ -0.53
NR1H3-235ENST00000616973 ADAMTSL5Q6ZMM2 481 aa11.75□□□□□ -0.53
NR1H3-235ENST00000616973 PHLDA3Q9Y5J5 127 aa11.75□□□□□ -0.53
NR1H3-235ENST00000616973 C7orf71A4D174 169 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 GNRH2O43555 120 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 FCER1GP30273 86 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 LGALS9BQ3B8N2 356 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 LGALS9CQ6DKI2 356 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 Q6ZN92 141 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 HELZ2Q9BYK8 2649 aaKnown RBP11.74□□□□□ -0.53
NR1H3-235ENST00000616973 ZANQ9Y493 2812 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 TCAPO15273 167 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 DUSP14O95147 198 aaKnown RBP11.74□□□□□ -0.53
NR1H3-235ENST00000616973 HNRNPA3P51991 378 aaKnown RBP11.74□□□□□ -0.53
NR1H3-235ENST00000616973 TCTEX1D4Q5JR98 221 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 FAM159AQ6UWV7 190 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 C18orf65Q6ZTR6 163 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 WFDC12Q8WWY7 111 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 DPH3P1Q9H4G8 78 aa11.74□□□□□ -0.53
NR1H3-235ENST00000616973 CREBBPQ92793 2442 aa11.73□□□□□ -0.53
NR1H3-235ENST00000616973 ABCA12Q86UK0 2595 aa11.73□□□□□ -0.53
NR1H3-235ENST00000616973 TRAV2A0A0B4J234 112 aa11.73□□□□□ -0.53
NR1H3-235ENST00000616973 HSBP1L1C9JCN9 74 aa11.73□□□□□ -0.53
NR1H3-235ENST00000616973 M0R381 172 aa11.73□□□□□ -0.53
NR1H3-235ENST00000616973 SLURP1P55000 103 aa11.73□□□□□ -0.53
NR1H3-235ENST00000616973 NUTF2P61970 127 aaKnown RBP11.73□□□□□ -0.53
NR1H3-235ENST00000616973 Q6ZSV7 163 aa11.73□□□□□ -0.53
NR1H3-235ENST00000616973 IFI27L1Q96BM0 104 aa11.73□□□□□ -0.53
NR1H3-235ENST00000616973 FOXC2Q99958 501 aa11.73□□□□□ -0.53
NR1H3-235ENST00000616973 PEMTQ9UBM1 199 aa11.73□□□□□ -0.53
NR1H3-235ENST00000616973 MRPS16Q9Y3D3 137 aaKnown RBP11.73□□□□□ -0.53
NR1H3-235ENST00000616973 APCP25054 2843 aa11.73□□□□□ -0.53
NR1H3-235ENST00000616973 hDV102S1A0JD36 115 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms