RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 SCGB2A2Q13296 93 aa11.87□□□□□ -0.51
GPN1-212ENST00000616939 C2orf66Q6UXQ4 117 aa11.87□□□□□ -0.51
GPN1-212ENST00000616939 PRRC2CQ9Y520 2896 aaKnown RBP11.87□□□□□ -0.51
GPN1-212ENST00000616939 TRBV20-1A0A075B6N2 111 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 PRSS29PA6NIE9 313 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 SYT8Q8NBV8 401 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 ITLN2Q8WWU7 325 aaPredicted RBP11.86□□□□□ -0.51
GPN1-212ENST00000616939 EEF1AKMT3Q96AZ1 226 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 CCDC140Q96MF4 163 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 TRBV7-1A0A0A6YYK4 115 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 M0QXV9 152 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 CLEC3BP05452 202 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 TEN1Q86WV5 123 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 Q8NA96 180 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 LINC00477Q96M19 166 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 SH3BGRL2Q9UJC5 107 aa11.86□□□□□ -0.51
GPN1-212ENST00000616939 IGHV3OR16-8A0A075B7F1 116 aa11.85□□□□□ -0.51
GPN1-212ENST00000616939 HERVK_113P61574 105 aa11.85□□□□□ -0.51
GPN1-212ENST00000616939 TRAV21A0A0B4J279 112 aa11.84□□□□□ -0.51
GPN1-212ENST00000616939 FBXL19-AS1Q494R0 122 aa11.84□□□□□ -0.51
GPN1-212ENST00000616939 PRR9Q5T870 116 aa11.84□□□□□ -0.51
GPN1-212ENST00000616939 PLEKHB2Q96CS7 222 aa11.84□□□□□ -0.51
GPN1-212ENST00000616939 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
GPN1-212ENST00000616939 IGHV3-35A0A0C4DH35 117 aa11.83□□□□□ -0.51
GPN1-212ENST00000616939 NXPH4O95158 308 aa11.83□□□□□ -0.51
GPN1-212ENST00000616939 SCGB1D4Q6XE38 83 aa11.83□□□□□ -0.51
GPN1-212ENST00000616939 NFE4Q86UQ8 179 aa11.83□□□□□ -0.51
GPN1-212ENST00000616939 VKORC1Q9BQB6 163 aa11.83□□□□□ -0.51
GPN1-212ENST00000616939 TRBV7-9A0A0J9YWB2 115 aa11.83□□□□□ -0.52
GPN1-212ENST00000616939 OVOL1O14753 267 aa11.83□□□□□ -0.52
GPN1-212ENST00000616939 ASIPP42127 132 aa11.83□□□□□ -0.52
GPN1-212ENST00000616939 PSMB2P49721 201 aa11.83□□□□□ -0.52
GPN1-212ENST00000616939 Q6ZUT4 128 aa11.83□□□□□ -0.52
GPN1-212ENST00000616939 NDUFA11Q86Y39 141 aa11.83□□□□□ -0.52
GPN1-212ENST00000616939 APRG1Q8IVJ8 170 aa11.83□□□□□ -0.52
GPN1-212ENST00000616939 ZFAND2AQ8N6M9 145 aa11.83□□□□□ -0.52
GPN1-212ENST00000616939 GLMPQ8WWB7 406 aa11.83□□□□□ -0.52
GPN1-212ENST00000616939 A0A0J9YY99 117 aa11.82□□□□□ -0.52
GPN1-212ENST00000616939 SPINK8P0C7L1 97 aa11.82□□□□□ -0.52
GPN1-212ENST00000616939 SRSF9Q13242 221 aaKnown RBP eCLIP11.82□□□□□ -0.52
GPN1-212ENST00000616939 CLEC19AQ6UXS0 136 aa11.82□□□□□ -0.52
GPN1-212ENST00000616939 RPL39LQ96EH5 51 aaKnown RBP11.82□□□□□ -0.52
GPN1-212ENST00000616939 KLK15Q9H2R5 256 aa11.82□□□□□ -0.52
GPN1-212ENST00000616939 TNRC18O15417 2968 aaPredicted RBP11.81□□□□□ -0.52
GPN1-212ENST00000616939 COL6A3P12111 3177 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 ATP6V0E1O15342 81 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 ECSCRQ19T08 205 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 TMEM141Q96I45 108 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 C16orf92Q96LL3 132 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 CARD19Q96LW7 228 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 CLUHP3Q96NS8 147 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 IGLV4-69A0A075B6H9 119 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 IGHV4OR15-8A0A075B7B6 117 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 A0A087WW49 117 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 IGHV3-66A0A0C4DH42 116 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 CRYGDP07320 174 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 FAM19A4Q96LR4 140 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 SIRPDQ9H106 197 aa11.81□□□□□ -0.52
GPN1-212ENST00000616939 ARHGAP32A7KAX9 2087 aa11.8□□□□□ -0.52
GPN1-212ENST00000616939 TRAV26-1A0A087WT03 109 aa11.8□□□□□ -0.52
GPN1-212ENST00000616939 C11orf86A6NJI1 115 aa11.8□□□□□ -0.52
GPN1-212ENST00000616939 FHL3Q13643 280 aa11.8□□□□□ -0.52
GPN1-212ENST00000616939 Q6ZQT7 251 aa11.8□□□□□ -0.52
GPN1-212ENST00000616939 GPHB5Q86YW7 130 aa11.8□□□□□ -0.52
GPN1-212ENST00000616939 LOC107984156A0A0G2JMH3 177 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 A8MWV9 139 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 ARL17AQ8IVW1 177 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 TIMM17AQ99595 171 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 PHLDA3Q9Y5J5 127 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 POLEQ07864 2286 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 TMEM262E9PQX1 116 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 TCL1BO95988 128 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 IGHV3-30P01768 117 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 MT-ATP8P03928 68 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 IGHV3-30-5P0DP03 117 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 S100A4P26447 101 aaKnown RBP11.79□□□□□ -0.52
GPN1-212ENST00000616939 XGP55808 180 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 PMVKQ15126 192 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 C11orf71Q6IPW1 123 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 ZFP2Q6ZN57 461 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 C10orf126Q8N4M7 172 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 SLC25A29Q8N8R3 303 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 OR10J6PQ8NGY7 276 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 LINC01560Q8TB33 94 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 C20orf173Q96LM9 149 aa11.79□□□□□ -0.52
GPN1-212ENST00000616939 ZNF318Q5VUA4 2279 aa11.78□□□□□ -0.52
GPN1-212ENST00000616939 IGIPA6NJ69 53 aa11.78□□□□□ -0.52
GPN1-212ENST00000616939 ZNF688P0C7X2 276 aa11.78□□□□□ -0.52
GPN1-212ENST00000616939 C14orf178Q8N769 122 aaPredicted RBP11.78□□□□□ -0.52
GPN1-212ENST00000616939 SOCS3O14543 225 aa11.77□□□□□ -0.52
GPN1-212ENST00000616939 DUSP14O95147 198 aaKnown RBP11.77□□□□□ -0.52
GPN1-212ENST00000616939 TSHBP01222 138 aa11.77□□□□□ -0.52
GPN1-212ENST00000616939 MGPP08493 103 aa11.77□□□□□ -0.52
GPN1-212ENST00000616939 AJUBAQ96IF1 538 aa11.77□□□□□ -0.52
GPN1-212ENST00000616939 LINC01600Q96MT4 127 aa11.77□□□□□ -0.52
GPN1-212ENST00000616939 ERG28Q9UKR5 140 aa11.77□□□□□ -0.52
GPN1-212ENST00000616939 KIF25-AS1Q9Y6Z4 181 aa11.77□□□□□ -0.52
GPN1-212ENST00000616939 SPENQ96T58 3664 aaKnown RBP11.77□□□□□ -0.53
GPN1-212ENST00000616939 IGHV3OR16-13A0A075B7E8 117 aa11.76□□□□□ -0.53
GPN1-212ENST00000616939 IGHV3-74A0A0B4J1X5 117 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms