RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 FAM162BQ5T6X4 162 aa10.7□□□□□ -0.7
UBXN1-218ENST00000616865 Q6AWC8 147 aa10.7□□□□□ -0.7
UBXN1-218ENST00000616865 C1orf158Q8N1D5 194 aa10.7□□□□□ -0.7
UBXN1-218ENST00000616865 DAZAP1Q96EP5 407 aaKnown RBP10.7□□□□□ -0.7
UBXN1-218ENST00000616865 SMIM12Q96EX1 92 aa10.7□□□□□ -0.7
UBXN1-218ENST00000616865 ZC2HC1AQ96GY0 325 aa10.7□□□□□ -0.7
UBXN1-218ENST00000616865 PFN1P07737 140 aaKnown RBP10.69□□□□□ -0.7
UBXN1-218ENST00000616865 RRN3P1Q2M238 152 aa10.69□□□□□ -0.7
UBXN1-218ENST00000616865 MUC21Q5SSG8 566 aa10.69□□□□□ -0.7
UBXN1-218ENST00000616865 FAM159AQ6UWV7 190 aa10.69□□□□□ -0.7
UBXN1-218ENST00000616865 C11orf45Q8TAV5 145 aa10.69□□□□□ -0.7
UBXN1-218ENST00000616865 PYGO2Q9BRQ0 406 aa10.69□□□□□ -0.7
UBXN1-218ENST00000616865 TRBV20OR9-2A0A075B6H5 130 aa10.68□□□□□ -0.7
UBXN1-218ENST00000616865 IGHV1OR15-1A0A075B7D0 117 aa10.68□□□□□ -0.7
UBXN1-218ENST00000616865 PGPEP1LA6NFU8 196 aa10.68□□□□□ -0.7
UBXN1-218ENST00000616865 SMIM9A6NGZ8 99 aa10.68□□□□□ -0.7
UBXN1-218ENST00000616865 CBY3A6NI87 242 aa10.68□□□□□ -0.7
UBXN1-218ENST00000616865 ZNF705GA8MUZ8 300 aaPredicted RBP10.68□□□□□ -0.7
UBXN1-218ENST00000616865 SH2D1AO60880 128 aa10.68□□□□□ -0.7
UBXN1-218ENST00000616865 ZNF324O75467 553 aaPredicted RBP10.68□□□□□ -0.7
UBXN1-218ENST00000616865 RBMY1A1P0DJD3 496 aaKnown RBP10.68□□□□□ -0.7
UBXN1-218ENST00000616865 RBMY1CP0DJD4 496 aa10.68□□□□□ -0.7
UBXN1-218ENST00000616865 ZNF80P51504 273 aaPredicted RBP10.68□□□□□ -0.7
UBXN1-218ENST00000616865 RBMY1FQ15415 496 aaKnown RBP10.68□□□□□ -0.7
UBXN1-218ENST00000616865 TMEM241Q24JQ0 296 aa10.68□□□□□ -0.7
UBXN1-218ENST00000616865 ZNF705AQ6ZN79 300 aaPredicted RBP10.68□□□□□ -0.7
UBXN1-218ENST00000616865 MLST8Q9BVC4 326 aa10.68□□□□□ -0.7
UBXN1-218ENST00000616865 ORM1P02763 201 aa10.67□□□□□ -0.7
UBXN1-218ENST00000616865 MIFP14174 115 aa10.67□□□□□ -0.7
UBXN1-218ENST00000616865 COX8CQ7Z4L0 72 aa10.67□□□□□ -0.7
UBXN1-218ENST00000616865 EIF4E3Q8N5X7 224 aaKnown RBP10.67□□□□□ -0.7
UBXN1-218ENST00000616865 OCC1Q8TAD7 63 aa10.67□□□□□ -0.7
UBXN1-218ENST00000616865 KCNS1Q96KK3 526 aa10.67□□□□□ -0.7
UBXN1-218ENST00000616865 SDF2L1Q9HCN8 221 aa10.67□□□□□ -0.7
UBXN1-218ENST00000616865 NAT8Q9UHE5 227 aa10.67□□□□□ -0.7
UBXN1-218ENST00000616865 LY96Q9Y6Y9 160 aa10.67□□□□□ -0.7
UBXN1-218ENST00000616865 IGLV2-8P01709 118 aa10.66□□□□□ -0.7
UBXN1-218ENST00000616865 TCTAP57738 103 aa10.66□□□□□ -0.7
UBXN1-218ENST00000616865 OR5I1Q13606 314 aa10.66□□□□□ -0.7
UBXN1-218ENST00000616865 Q6ZQT7 251 aa10.66□□□□□ -0.7
UBXN1-218ENST00000616865 NEU1Q99519 415 aa10.66□□□□□ -0.7
UBXN1-218ENST00000616865 TRGV11A0A075B6L2 103 aa10.65□□□□□ -0.7
UBXN1-218ENST00000616865 B4DEV8 164 aa10.65□□□□□ -0.7
UBXN1-218ENST00000616865 F8W036 122 aa10.65□□□□□ -0.7
UBXN1-218ENST00000616865 M0R036 132 aa10.65□□□□□ -0.7
UBXN1-218ENST00000616865 ADIRFQ15847 76 aa10.65□□□□□ -0.7
UBXN1-218ENST00000616865 ANXA2RQ3ZCQ2 193 aa10.65□□□□□ -0.7
UBXN1-218ENST00000616865 X6R8D5 127 aa10.65□□□□□ -0.7
UBXN1-218ENST00000616865 FAT2Q9NYQ8 4349 aa10.65□□□□□ -0.7
UBXN1-218ENST00000616865 IGHV4-28A0A0C4DH34 117 aa10.64□□□□□ -0.71
UBXN1-218ENST00000616865 TMEM218A2RU14 115 aa10.64□□□□□ -0.71
UBXN1-218ENST00000616865 DEFB4AO15263 64 aa10.64□□□□□ -0.71
UBXN1-218ENST00000616865 P01737 135 aa10.64□□□□□ -0.71
UBXN1-218ENST00000616865 CRIP1P50238 77 aa10.64□□□□□ -0.71
UBXN1-218ENST00000616865 EMP1P54849 157 aa10.64□□□□□ -0.71
UBXN1-218ENST00000616865 NDUFA5Q16718 116 aa10.64□□□□□ -0.71
UBXN1-218ENST00000616865 ZNF493Q6ZR52 646 aa10.64□□□□□ -0.71
UBXN1-218ENST00000616865 C16orf74Q96GX8 76 aa10.64□□□□□ -0.71
UBXN1-218ENST00000616865 LINC00467Q9BRT7 94 aa10.64□□□□□ -0.71
UBXN1-218ENST00000616865 DNAH2Q9P225 4427 aa10.64□□□□□ -0.71
UBXN1-218ENST00000616865 TMSB15BA0A087X1C1 80 aa10.63□□□□□ -0.71
UBXN1-218ENST00000616865 TMEM189A5PLL7 270 aa10.63□□□□□ -0.71
UBXN1-218ENST00000616865 SNURFLB1AK76 121 aa10.63□□□□□ -0.71
UBXN1-218ENST00000616865 K7EN84 100 aa10.63□□□□□ -0.71
UBXN1-218ENST00000616865 PRM2P04554 102 aa10.63□□□□□ -0.71
UBXN1-218ENST00000616865 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
UBXN1-218ENST00000616865 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
UBXN1-218ENST00000616865 LINC01551Q86U37 167 aa10.63□□□□□ -0.71
UBXN1-218ENST00000616865 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
UBXN1-218ENST00000616865 APLNQ9ULZ1 77 aa10.63□□□□□ -0.71
UBXN1-218ENST00000616865 AZU1P20160 251 aa10.62□□□□□ -0.71
UBXN1-218ENST00000616865 ERVFC1-1P60608 527 aa10.62□□□□□ -0.71
UBXN1-218ENST00000616865 RPL23P62829 140 aaKnown RBP10.62□□□□□ -0.71
UBXN1-218ENST00000616865 C11orf21Q9P2W6 132 aa10.62□□□□□ -0.71
UBXN1-218ENST00000616865 TP53TG3Q9ULZ0 132 aa10.62□□□□□ -0.71
UBXN1-218ENST00000616865 XKRY2A2RUG3 117 aa10.61□□□□□ -0.71
UBXN1-218ENST00000616865 IGLL5B9A064 214 aa10.61□□□□□ -0.71
UBXN1-218ENST00000616865 KRBOX1C9JBD0 128 aa10.61□□□□□ -0.71
UBXN1-218ENST00000616865 GNRH2O43555 120 aa10.61□□□□□ -0.71
UBXN1-218ENST00000616865 GATCO43716 136 aaKnown RBP10.61□□□□□ -0.71
UBXN1-218ENST00000616865 ASIPP42127 132 aa10.61□□□□□ -0.71
UBXN1-218ENST00000616865 RPS20P60866 119 aaKnown RBP10.61□□□□□ -0.71
UBXN1-218ENST00000616865 TDRG1Q3Y452 100 aa10.61□□□□□ -0.71
UBXN1-218ENST00000616865 LINC01559Q495D7 138 aa10.61□□□□□ -0.71
UBXN1-218ENST00000616865 IBA57Q5T440 356 aaKnown RBP10.61□□□□□ -0.71
UBXN1-218ENST00000616865 C15orf54Q8N8G6 183 aa10.61□□□□□ -0.71
UBXN1-218ENST00000616865 Q8NAQ8 132 aa10.61□□□□□ -0.71
UBXN1-218ENST00000616865 OR2D3Q8NGH3 330 aa10.61□□□□□ -0.71
UBXN1-218ENST00000616865 RNASE7Q9H1E1 156 aaKnown RBP10.61□□□□□ -0.71
UBXN1-218ENST00000616865 TIMM8BQ9Y5J9 83 aaPredicted RBP10.61□□□□□ -0.71
UBXN1-218ENST00000616865 GRIFINA4D1Z8 144 aa10.6□□□□□ -0.71
UBXN1-218ENST00000616865 C19orf71A6NCJ1 209 aa10.6□□□□□ -0.71
UBXN1-218ENST00000616865 TYMSP04818 313 aa10.6□□□□□ -0.71
UBXN1-218ENST00000616865 PNRC1Q12796 327 aaPredicted RBP10.6□□□□□ -0.71
UBXN1-218ENST00000616865 SLC7A5P1Q8MH63 180 aa10.6□□□□□ -0.71
UBXN1-218ENST00000616865 NUDT10Q8NFP7 164 aa10.6□□□□□ -0.71
UBXN1-218ENST00000616865 NUDT11Q96G61 164 aa10.6□□□□□ -0.71
UBXN1-218ENST00000616865 SEC11CQ9BY50 192 aa10.6□□□□□ -0.71
UBXN1-218ENST00000616865 RPP21Q9H633 154 aaKnown RBP10.6□□□□□ -0.71
UBXN1-218ENST00000616865 GSN-AS1Q9NRJ2 163 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms