RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 RAB1BQ9H0U4 201 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 IGLC6P0CF74 106 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 HOXB4P17483 251 aaPredicted RBP5.17□□□□□ -1.58
LMO3-235ENST00000616247 SMCPP49901 116 aaPredicted RBP5.17□□□□□ -1.58
LMO3-235ENST00000616247 TAL2Q16559 108 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 RPL39LQ96EH5 51 aaKnown RBP5.17□□□□□ -1.58
LMO3-235ENST00000616247 SORL1Q92673 2214 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 ANKHD1Q8IWZ3 2542 aaKnown RBP5.17□□□□□ -1.58
LMO3-235ENST00000616247 NBR2O15453 112 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 CEACAM4O75871 244 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 TSPAN13O95857 204 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 PRSS2P07478 247 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 NDPQ00604 133 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 PAX8Q06710 450 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 GAGE5Q13069 117 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 GAGE6Q13070 117 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 PDE6HQ13956 83 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 LINC00311Q8N616 119 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 ANKRD29Q8N6D5 301 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 PRO0461Q9UI25 63 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 PHLDA3Q9Y5J5 127 aa5.17□□□□□ -1.58
LMO3-235ENST00000616247 RAI1Q7Z5J4 1906 aaPredicted RBP5.16□□□□□ -1.58
LMO3-235ENST00000616247 TRBV7-3A0A075B6L6 115 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 TRAV2A0A0B4J234 112 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 TRBV6-1A0A0K0K1D8 114 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 SHISA9B4DS77 424 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 TCL1BO95988 128 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 CFAP126Q5VTH2 177 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 C2orf66Q6UXQ4 117 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 ASCL5Q7RTU5 278 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 GATD1Q8NB37 220 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 RNASE6Q93091 150 aaKnown RBP5.16□□□□□ -1.58
LMO3-235ENST00000616247 ZMAT4Q9H898 229 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 FAM215AQ9Y5M1 114 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 C2CD3Q4AC94 2353 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 IGKV3D-20A0A0C4DH25 116 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 ZZEF1O43149 2961 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 ZNF688P0C7X2 276 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 DEFB1P60022 68 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 HERVK_113P61574 105 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 FHL3Q13643 280 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 TEN1Q86WV5 123 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 AGPAT4-IT1Q9H0P7 198 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 MBD3L4A6NDZ8 208 aaPredicted RBP5.16□□□□□ -1.58
LMO3-235ENST00000616247 MBD3L3A6NE82 208 aaPredicted RBP5.16□□□□□ -1.58
LMO3-235ENST00000616247 MBD3L5A6NJ08 208 aaPredicted RBP5.16□□□□□ -1.58
LMO3-235ENST00000616247 CD59P13987 128 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 CLEC19AQ6UXS0 136 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 TRPT1Q86TN4 253 aaKnown RBP5.16□□□□□ -1.58
LMO3-235ENST00000616247 OR11H6Q8NGC7 330 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 MBD3L2Q8NHZ7 208 aaPredicted RBP5.16□□□□□ -1.58
LMO3-235ENST00000616247 C16orf92Q96LL3 132 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 SMIM2Q9BVW6 85 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 C11orf21Q9P2W6 132 aa5.16□□□□□ -1.58
LMO3-235ENST00000616247 NTN5Q8WTR8 489 aaPredicted RBP5.15□□□□□ -1.58
LMO3-235ENST00000616247 CARD19Q96LW7 228 aa5.15□□□□□ -1.58
LMO3-235ENST00000616247 ERG28Q9UKR5 140 aa5.15□□□□□ -1.58
LMO3-235ENST00000616247 SUMO2P61956 95 aaKnown RBP5.15□□□□□ -1.59
LMO3-235ENST00000616247 FAM74A4Q5TZK3 123 aa5.15□□□□□ -1.59
LMO3-235ENST00000616247 DPM3Q9P2X0 92 aa5.15□□□□□ -1.59
LMO3-235ENST00000616247 MRPS12O15235 138 aaKnown RBP5.14□□□□□ -1.59
LMO3-235ENST00000616247 SLC25A20O43772 301 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 CRYGBP07316 175 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 LGALS3P17931 250 aaKnown RBP5.14□□□□□ -1.59
LMO3-235ENST00000616247 HERV-K104P63124 156 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 ORMDL2Q53FV1 153 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 DEFB124Q8NES8 71 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 ZNF256Q9Y2P7 627 aaPredicted RBP5.14□□□□□ -1.59
LMO3-235ENST00000616247 SMAD5-AS1Q9Y6J3 95 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 TLN1Q9Y490 2541 aaKnown RBP5.14□□□□□ -1.59
LMO3-235ENST00000616247 ZFHX2Q9C0A1 2572 aaPredicted RBP5.14□□□□□ -1.59
LMO3-235ENST00000616247 CSMD1Q96PZ7 3565 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 SPG11Q96JI7 2443 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 DUSP14O95147 198 aaKnown RBP5.14□□□□□ -1.59
LMO3-235ENST00000616247 IGLV1-47P01700 117 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 IGF1P05019 195 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 NPC2P61916 151 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 C15orf32Q32M92 178 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 PIFOQ8TCI5 191 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 FANCD2OSQ96PS1 177 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 LINC00527Q9UJ94 153 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 B9A039 149 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 TMEM262E9PQX1 116 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 C5orf64Q2M2E5 130 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 LINC01559Q495D7 138 aa5.14□□□□□ -1.59
LMO3-235ENST00000616247 TRAV4A0A0B4J268 109 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 GAGE12JA6NER3 117 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 C11orf86A6NJI1 115 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 ADARB2-AS1A8MUL3 147 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 GAGE7O76087 117 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 CTSGP08311 255 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 GAGE12FP0CL80 117 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 GAGE12GP0CL81 117 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 GAGE12IP0CL82 117 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 RNASE4P34096 147 aaKnown RBP5.13□□□□□ -1.59
LMO3-235ENST00000616247 TCF15Q12870 199 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 GAGE4Q13068 117 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 Q6ZS46 218 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 NRACQ8N912 160 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 BAALCQ8WXS3 180 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms