RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 FOXI2Q6ZQN5 318 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 MBD6Q96DN6 1003 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 SPXQ9BT56 116 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 SELENOKQ9Y6D0 94 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 CACNA1HO95180 2353 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 IGKV3D-20A0A0C4DH25 116 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 TDRG1Q3Y452 100 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 CHCHD5Q9BSY4 110 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 CRYGBP07316 175 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 SP5Q6BEB4 398 aaPredicted RBP6.91□□□□□ -1.3
PCDH15-229ENST00000616114 C5orf56Q8N8D9 126 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 MLST8Q9BVC4 326 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 K7EP13 123 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 TMEM86BQ8N661 226 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 SIRPDQ9H106 197 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 ODF3BA8MYP8 253 aa6.91□□□□□ -1.3
PCDH15-229ENST00000616114 ATG2AQ2TAZ0 1938 aa6.9□□□□□ -1.3
PCDH15-229ENST00000616114 TCTEX1D4Q5JR98 221 aa6.9□□□□□ -1.3
PCDH15-229ENST00000616114 SPATA12Q7Z6I5 190 aa6.9□□□□□ -1.3
PCDH15-229ENST00000616114 FANCD2OSQ96PS1 177 aa6.9□□□□□ -1.3
PCDH15-229ENST00000616114 CPAMD8Q8IZJ3 1885 aa6.9□□□□□ -1.3
PCDH15-229ENST00000616114 MED13Q9UHV7 2174 aa6.9□□□□□ -1.31
PCDH15-229ENST00000616114 USF3Q68DE3 2245 aa6.9□□□□□ -1.31
PCDH15-229ENST00000616114 RNF223E7ERA6 249 aa6.9□□□□□ -1.31
PCDH15-229ENST00000616114 HIGD1BQ9P298 99 aa6.9□□□□□ -1.31
PCDH15-229ENST00000616114 TNRC6AQ8NDV7 1962 aaKnown RBP6.9□□□□□ -1.31
PCDH15-229ENST00000616114 TMEM89A2RUT3 159 aa6.89□□□□□ -1.31
PCDH15-229ENST00000616114 K7EMT4 169 aa6.89□□□□□ -1.31
PCDH15-229ENST00000616114 MALP21145 153 aa6.89□□□□□ -1.31
PCDH15-229ENST00000616114 FRMD6-AS1P0C7T7 363 aa6.89□□□□□ -1.31
PCDH15-229ENST00000616114 LINC00173Q6ZV60 143 aa6.89□□□□□ -1.31
PCDH15-229ENST00000616114 KLK9Q9UKQ9 250 aa6.89□□□□□ -1.31
PCDH15-229ENST00000616114 TRAV12-1A0A0B4J245 112 aa6.89□□□□□ -1.31
PCDH15-229ENST00000616114 DYSFO75923 2080 aa6.89□□□□□ -1.31
PCDH15-229ENST00000616114 UTF1Q5T230 341 aa6.89□□□□□ -1.31
PCDH15-229ENST00000616114 LGALS1P09382 135 aaKnown RBP6.89□□□□□ -1.31
PCDH15-229ENST00000616114 C2orf82Q6UX34 121 aa6.89□□□□□ -1.31
PCDH15-229ENST00000616114 PRSS29PA6NIE9 313 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 LEPROTO15243 131 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 CRPP02741 224 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 LINC00158P58513 81 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 C2orf70A6NJV1 201 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 Q5PR19 223 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 VPREB3Q9UKI3 123 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 SPTBN1Q01082 2364 aaKnown RBP6.88□□□□□ -1.31
PCDH15-229ENST00000616114 MED12LQ86YW9 2145 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 ZFAND6Q6FIF0 208 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 ZGRF1Q86YA3 2104 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 MYCNOSP40205 109 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 C12orf74Q32Q52 190 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 C10orf105Q8TEF2 133 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 ZFP36P26651 326 aaKnown RBP6.88□□□□□ -1.31
PCDH15-229ENST00000616114 NSUN5P1Q3KNT7 163 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 RNF152Q8N8N0 203 aa6.88□□□□□ -1.31
PCDH15-229ENST00000616114 SPTBN2O15020 2390 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 J3QQQ9 107 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 GNRH2O43555 120 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 ANAPC13Q9BS18 74 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 LY6LH3BQJ8 138 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 RNASE1P07998 156 aaKnown RBP6.87□□□□□ -1.31
PCDH15-229ENST00000616114 GAGE2BQ13066 116 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 GAGE2EQ4V326 116 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 ANKRD39Q53RE8 183 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 C1orf159Q96HA4 380 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 GAGE2DQ9UEU5 116 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 PRO1854Q9UHT4 67 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 IGHV4-61A0A0C4DH41 118 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 PCP2Q8IVA1 136 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 C11orf44Q8N8P7 122 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 PHLDA1Q8WV24 401 aaPredicted RBP6.87□□□□□ -1.31
PCDH15-229ENST00000616114 PPDPFLQ8WWR9 84 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 UBE2E2Q96LR5 201 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 DEFB104AQ8WTQ1 72 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 POLEQ07864 2286 aa6.87□□□□□ -1.31
PCDH15-229ENST00000616114 WNK2Q9Y3S1 2297 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 TRAV12-2A0A075B6T6 113 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 PRIMA1Q86XR5 153 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 MSRB1Q9NZV6 116 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 GATA1P15976 413 aaPredicted RBP6.86□□□□□ -1.31
PCDH15-229ENST00000616114 EBI3Q14213 229 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 DEFB112Q30KQ8 113 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 TRBV25-1A0A075B6N4 114 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 PRAC2D3DTV9 90 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 SLC25A20O43772 301 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 IGHG2P01859 326 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 C9JAW5 83 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 GDF5OSQ5U4N7 250 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 AJUBAQ96IF1 538 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 RNF114Q9Y508 228 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 CCL25O15444 150 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 AZU1P20160 251 aa6.86□□□□□ -1.31
PCDH15-229ENST00000616114 F6UB75 175 aa6.85□□□□□ -1.31
PCDH15-229ENST00000616114 IGHV3-53P01767 116 aa6.85□□□□□ -1.31
PCDH15-229ENST00000616114 CKS1BP61024 79 aa6.85□□□□□ -1.31
PCDH15-229ENST00000616114 GPHB5Q86YW7 130 aa6.85□□□□□ -1.31
PCDH15-229ENST00000616114 DNAJC30Q96LL9 226 aa6.85□□□□□ -1.31
PCDH15-229ENST00000616114 PLA2G5P39877 138 aa6.85□□□□□ -1.31
PCDH15-229ENST00000616114 LINC00322Q6ZN03 302 aaPredicted RBP6.85□□□□□ -1.31
PCDH15-229ENST00000616114 C22orf34Q6ZV56 151 aa6.85□□□□□ -1.31
PCDH15-229ENST00000616114 TRAV13-1A0A0B4J241 112 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms