RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 FAM167A-AS1Q96KT0 104 aa14.84□□□□□ -0.03
SPAST-203ENST00000615843 FOXI1Q12951 378 aa14.84□□□□□ -0.03
SPAST-203ENST00000615843 RNASE13Q5GAN3 156 aaKnown RBP14.84□□□□□ -0.03
SPAST-203ENST00000615843 ZNRF2Q8NHG8 242 aa14.84□□□□□ -0.03
SPAST-203ENST00000615843 ACYP1P07311 99 aa14.83□□□□□ -0.03
SPAST-203ENST00000615843 TINCRA0A1B0GVN0 87 aa14.83□□□□□ -0.04
SPAST-203ENST00000615843 KRTAP27-1Q3LI81 207 aa14.83□□□□□ -0.04
SPAST-203ENST00000615843 RUSC1-AS1Q66K80 236 aa14.83□□□□□ -0.04
SPAST-203ENST00000615843 HERVK_113P63121 156 aa14.83□□□□□ -0.04
SPAST-203ENST00000615843 SRSF2Q01130 221 aaKnown RBP14.83□□□□□ -0.04
SPAST-203ENST00000615843 CR1LQ2VPA4 569 aa14.83□□□□□ -0.04
SPAST-203ENST00000615843 MSRB1Q9NZV6 116 aa14.83□□□□□ -0.04
SPAST-203ENST00000615843 XCL2Q9UBD3 114 aa14.83□□□□□ -0.04
SPAST-203ENST00000615843 ACACAQ13085 2346 aa14.82□□□□□ -0.04
SPAST-203ENST00000615843 IGHV1-69DA0A0B4J2H0 117 aa14.82□□□□□ -0.04
SPAST-203ENST00000615843 RHOHQ15669 191 aa14.82□□□□□ -0.04
SPAST-203ENST00000615843 LY6G6EA0A0G2JKS1 128 aa14.82□□□□□ -0.04
SPAST-203ENST00000615843 RBAKDNA6NC62 111 aa14.82□□□□□ -0.04
SPAST-203ENST00000615843 U3KQA8 63 aa14.82□□□□□ -0.04
SPAST-203ENST00000615843 NSUN5P1Q3KNT7 163 aa14.82□□□□□ -0.04
SPAST-203ENST00000615843 F8WEM9 126 aa14.82□□□□□ -0.04
SPAST-203ENST00000615843 BAALC-AS2P0C853 105 aa14.82□□□□□ -0.04
SPAST-203ENST00000615843 DSCR9P59020 149 aa14.82□□□□□ -0.04
SPAST-203ENST00000615843 THSD7BQ9C0I4 1608 aa14.82□□□□□ -0.04
SPAST-203ENST00000615843 TRAV12-1A0A0B4J245 112 aa14.81□□□□□ -0.04
SPAST-203ENST00000615843 CRLF1O75462 422 aa14.81□□□□□ -0.04
SPAST-203ENST00000615843 KLHL30-AS1Q8NEE0 82 aa14.81□□□□□ -0.04
SPAST-203ENST00000615843 GNRH2O43555 120 aa14.81□□□□□ -0.04
SPAST-203ENST00000615843 RBMY1FQ15415 496 aaKnown RBP14.81□□□□□ -0.04
SPAST-203ENST00000615843 USF3Q68DE3 2245 aa14.81□□□□□ -0.04
SPAST-203ENST00000615843 DEFB130BP0DP73 79 aa14.81□□□□□ -0.04
SPAST-203ENST00000615843 DEFB130AP0DP74 79 aa14.81□□□□□ -0.04
SPAST-203ENST00000615843 C8orf31Q8N9H6 132 aa14.81□□□□□ -0.04
SPAST-203ENST00000615843 CITED2Q99967 270 aaPredicted RBP14.81□□□□□ -0.04
SPAST-203ENST00000615843 TMEM243Q9BU79 118 aa14.8□□□□□ -0.04
SPAST-203ENST00000615843 TRAV26-1A0A087WT03 109 aa14.8□□□□□ -0.04
SPAST-203ENST00000615843 C2orf70A6NJV1 201 aa14.8□□□□□ -0.04
SPAST-203ENST00000615843 NXPH4O95158 308 aa14.8□□□□□ -0.04
SPAST-203ENST00000615843 A4D1N5 150 aa14.8□□□□□ -0.04
SPAST-203ENST00000615843 MRAPQ8TCY5 172 aa14.8□□□□□ -0.04
SPAST-203ENST00000615843 KMT2EQ8IZD2 1858 aa14.79□□□□□ -0.04
SPAST-203ENST00000615843 MRPL53Q96EL3 112 aaKnown RBP14.79□□□□□ -0.04
SPAST-203ENST00000615843 C22orf46C9J442 243 aa14.79□□□□□ -0.04
SPAST-203ENST00000615843 RPL39LQ96EH5 51 aaKnown RBP14.79□□□□□ -0.04
SPAST-203ENST00000615843 LENEPQ9Y5L5 61 aa14.79□□□□□ -0.04
SPAST-203ENST00000615843 LINC01620Q4KN68 170 aa14.78□□□□□ -0.04
SPAST-203ENST00000615843 PRSS47A8MTI9 375 aa14.78□□□□□ -0.04
SPAST-203ENST00000615843 SPRY2O43597 315 aa14.78□□□□□ -0.04
SPAST-203ENST00000615843 RPL32P62910 135 aaKnown RBP14.78□□□□□ -0.04
SPAST-203ENST00000615843 KAAG1Q9UBP8 84 aa14.78□□□□□ -0.04
SPAST-203ENST00000615843 MUSTN1Q8IVN3 82 aa14.78□□□□□ -0.04
SPAST-203ENST00000615843 IGLV2-14P01704 120 aa14.77□□□□□ -0.04
SPAST-203ENST00000615843 RNF138Q8WVD3 245 aa14.77□□□□□ -0.04
SPAST-203ENST00000615843 SPATA12Q7Z6I5 190 aa14.77□□□□□ -0.05
SPAST-203ENST00000615843 CFHR3Q02985 330 aa14.77□□□□□ -0.05
SPAST-203ENST00000615843 EML6Q6ZMW3 1958 aa14.76□□□□□ -0.05
SPAST-203ENST00000615843 IGKV1-17P01599 117 aa14.76□□□□□ -0.05
SPAST-203ENST00000615843 F6UB75 175 aa14.76□□□□□ -0.05
SPAST-203ENST00000615843 DSCR8Q96T75 97 aa14.76□□□□□ -0.05
SPAST-203ENST00000615843 Q9H8V8 135 aa14.76□□□□□ -0.05
SPAST-203ENST00000615843 IGHV7-4-1A0A0J9YVY3 117 aa14.76□□□□□ -0.05
SPAST-203ENST00000615843 I3L2K1 104 aa14.75□□□□□ -0.05
SPAST-203ENST00000615843 IGKV1OR2-108A0A075B7D4 117 aa14.75□□□□□ -0.05
SPAST-203ENST00000615843 IGHV1-69P01742 117 aa14.75□□□□□ -0.05
SPAST-203ENST00000615843 ICOSQ9Y6W8 199 aa14.75□□□□□ -0.05
SPAST-203ENST00000615843 ANAPC1Q9H1A4 1944 aa14.75□□□□□ -0.05
SPAST-203ENST00000615843 GPR179Q6PRD1 2367 aa14.75□□□□□ -0.05
SPAST-203ENST00000615843 RBM3P98179 157 aaKnown RBP14.75□□□□□ -0.05
SPAST-203ENST00000615843 FAM236AA0A1B0GUQ0 79 aa14.75□□□□□ -0.05
SPAST-203ENST00000615843 FAM236BA0A1B0GV22 79 aa14.75□□□□□ -0.05
SPAST-203ENST00000615843 LY6DQ14210 128 aa14.74□□□□□ -0.05
SPAST-203ENST00000615843 ODF1Q14990 250 aa14.74□□□□□ -0.05
SPAST-203ENST00000615843 ATP6V0E2Q8NHE4 81 aa14.74□□□□□ -0.05
SPAST-203ENST00000615843 NBASA2RRP1 2371 aa14.73□□□□□ -0.05
SPAST-203ENST00000615843 YPEL4Q96NS1 127 aa14.73□□□□□ -0.05
SPAST-203ENST00000615843 K7EIM0 57 aa14.73□□□□□ -0.05
SPAST-203ENST00000615843 ZFP2Q6ZN57 461 aa14.73□□□□□ -0.05
SPAST-203ENST00000615843 CTSZQ9UBR2 303 aa14.73□□□□□ -0.05
SPAST-203ENST00000615843 ODF3L1Q8IXM7 274 aa14.72□□□□□ -0.05
SPAST-203ENST00000615843 COL6A6A6NMZ7 2263 aa14.72□□□□□ -0.05
SPAST-203ENST00000615843 E9PLD3 99 aa14.72□□□□□ -0.05
SPAST-203ENST00000615843 TCTEX1D4Q5JR98 221 aa14.72□□□□□ -0.05
SPAST-203ENST00000615843 MALRD1Q5VYJ5 2156 aa14.72□□□□□ -0.05
SPAST-203ENST00000615843 A0A0J9YXV3 536 aa14.71□□□□□ -0.05
SPAST-203ENST00000615843 LHBP01229 141 aa14.71□□□□□ -0.05
SPAST-203ENST00000615843 SUMO4Q6EEV6 95 aa14.71□□□□□ -0.05
SPAST-203ENST00000615843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.71□□□□□ -0.05
SPAST-203ENST00000615843 IGKV2-29A2NJV5 120 aaPredicted RBP14.71□□□□□ -0.05
SPAST-203ENST00000615843 SPRNQ5BIV9 151 aa14.71□□□□□ -0.05
SPAST-203ENST00000615843 TMEM258P61165 79 aa14.71□□□□□ -0.06
SPAST-203ENST00000615843 CACNA1BQ00975 2339 aa14.71□□□□□ -0.06
SPAST-203ENST00000615843 A0A0B4J2C4 111 aa14.7□□□□□ -0.06
SPAST-203ENST00000615843 ATOX1O00244 68 aa14.7□□□□□ -0.06
SPAST-203ENST00000615843 ORMDL1Q9P0S3 153 aa14.7□□□□□ -0.06
SPAST-203ENST00000615843 TRAV25A0A0B4J276 109 aa14.7□□□□□ -0.06
SPAST-203ENST00000615843 C19orf71A6NCJ1 209 aa14.7□□□□□ -0.06
SPAST-203ENST00000615843 A0A1B0GXF2 115 aa14.69□□□□□ -0.06
SPAST-203ENST00000615843 CDK2AP2O75956 126 aa14.69□□□□□ -0.06
SPAST-203ENST00000615843 LINC01619G3V211 115 aa14.69□□□□□ -0.06
SPAST-203ENST00000615843 J3KT08 172 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms