RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 IGKV1-33P01594 117 aa7.48□□□□□ -1.21
COL12A1-211ENST00000615798 RMI2Q96E14 147 aa7.48□□□□□ -1.21
COL12A1-211ENST00000615798 PFN1P07737 140 aaKnown RBP7.48□□□□□ -1.21
COL12A1-211ENST00000615798 BPY2O14599 106 aa7.48□□□□□ -1.21
COL12A1-211ENST00000615798 A0A087WWL8 130 aa7.48□□□□□ -1.21
COL12A1-211ENST00000615798 DPM3Q9P2X0 92 aa7.48□□□□□ -1.21
COL12A1-211ENST00000615798 LINC01619G3V211 115 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 BLCAPP62952 87 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 HGFACQ04756 655 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 LHBP01229 141 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 CELA2AP08217 269 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 VWCEQ96DN2 955 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 ZNF497Q6ZNH5 498 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 PAX8Q06710 450 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 PRR7Q8TB68 274 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 KLK9Q9UKQ9 250 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 TTC28Q96AY4 2481 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 PMS2P5A8MQ11 134 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 MST1P26927 711 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 IGKV1-9A0A0C4DH69 117 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 PRORYQ9H606 182 aa7.47□□□□□ -1.21
COL12A1-211ENST00000615798 SAA2-SAA4A0A096LPE2 208 aa7.46□□□□□ -1.21
COL12A1-211ENST00000615798 K7EN84 100 aa7.46□□□□□ -1.21
COL12A1-211ENST00000615798 WISP1O95388 367 aa7.46□□□□□ -1.21
COL12A1-211ENST00000615798 SAA2P0DJI9 122 aaPredicted RBP7.46□□□□□ -1.21
COL12A1-211ENST00000615798 ARMS2P0C7Q2 107 aa7.46□□□□□ -1.21
COL12A1-211ENST00000615798 PRO0628Q9UI54 55 aa7.46□□□□□ -1.21
COL12A1-211ENST00000615798 LINC00312Q9Y6C7 94 aa7.46□□□□□ -1.21
COL12A1-211ENST00000615798 SDIM1Q6ZPB5 146 aa7.46□□□□□ -1.22
COL12A1-211ENST00000615798 TIMM17AQ99595 171 aa7.46□□□□□ -1.22
COL12A1-211ENST00000615798 CCDC179H3BU77 68 aa7.46□□□□□ -1.22
COL12A1-211ENST00000615798 SPSB3Q6PJ21 355 aa7.46□□□□□ -1.22
COL12A1-211ENST00000615798 PCP2Q8IVA1 136 aa7.46□□□□□ -1.22
COL12A1-211ENST00000615798 COL4A4P53420 1690 aaPredicted RBP7.45□□□□□ -1.22
COL12A1-211ENST00000615798 COX7CP15954 63 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 PDLIM4P50479 330 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 C9orf139Q6ZV77 190 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 IGHV1-8P0DP01 117 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 TREML4Q6UXN2 200 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 WBP1Q96G27 269 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 C1QL2Q7Z5L3 287 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 CCL21O00585 134 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 CXCL6P80162 114 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 C20orf78Q9BR46 151 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 IGKV1D-43A0A0B4J1Z2 117 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 TRBV7-1A0A0A6YYK4 115 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 SIRPDQ9H106 197 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 RNF144BQ7Z419 303 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 MBD3L2Q8NHZ7 208 aaPredicted RBP7.45□□□□□ -1.22
COL12A1-211ENST00000615798 NUP210LQ5VU65 1888 aa7.45□□□□□ -1.22
COL12A1-211ENST00000615798 ZCCHC24Q8N2G6 241 aaKnown RBP7.45□□□□□ -1.22
COL12A1-211ENST00000615798 ADAMTS9Q9P2N4 1935 aa7.44□□□□□ -1.22
COL12A1-211ENST00000615798 FHL1Q13642 323 aa7.44□□□□□ -1.22
COL12A1-211ENST00000615798 IGHV3OR16-8A0A075B7F1 116 aa7.44□□□□□ -1.22
COL12A1-211ENST00000615798 TRAV26-2A0A0B4J265 109 aa7.44□□□□□ -1.22
COL12A1-211ENST00000615798 COA6Q5JTJ3 125 aaKnown RBP7.44□□□□□ -1.22
COL12A1-211ENST00000615798 NXPH4O95158 308 aa7.44□□□□□ -1.22
COL12A1-211ENST00000615798 KLF2Q9Y5W3 355 aaPredicted RBP7.44□□□□□ -1.22
COL12A1-211ENST00000615798 H0Y9J4 135 aa7.44□□□□□ -1.22
COL12A1-211ENST00000615798 ZIC4Q8N9L1 334 aa7.44□□□□□ -1.22
COL12A1-211ENST00000615798 VPREB3Q9UKI3 123 aa7.44□□□□□ -1.22
COL12A1-211ENST00000615798 RFNGQ9Y644 331 aa7.44□□□□□ -1.22
COL12A1-211ENST00000615798 CLPSP04118 112 aa7.44□□□□□ -1.22
COL12A1-211ENST00000615798 RPL15P61313 204 aaKnown RBP7.44□□□□□ -1.22
COL12A1-211ENST00000615798 UNQ6494/PRO21346Q6UXR6 183 aa7.44□□□□□ -1.22
COL12A1-211ENST00000615798 FAM222AQ5U5X8 452 aa7.43□□□□□ -1.22
COL12A1-211ENST00000615798 RPL18AQ02543 176 aaKnown RBP7.43□□□□□ -1.22
COL12A1-211ENST00000615798 ZFP36L1Q07352 338 aaKnown RBP7.43□□□□□ -1.22
COL12A1-211ENST00000615798 KIF26AQ9ULI4 1882 aaPredicted RBP7.43□□□□□ -1.22
COL12A1-211ENST00000615798 TMEM14EPQ6UXP3 125 aa7.43□□□□□ -1.22
COL12A1-211ENST00000615798 IGHV4OR15-8A0A075B7B6 117 aa7.43□□□□□ -1.22
COL12A1-211ENST00000615798 A0A087WW49 117 aa7.43□□□□□ -1.22
COL12A1-211ENST00000615798 LTBRP36941 435 aa7.43□□□□□ -1.22
COL12A1-211ENST00000615798 Q6P435 159 aa7.43□□□□□ -1.22
COL12A1-211ENST00000615798 RPP25LQ8N5L8 163 aaKnown RBP7.43□□□□□ -1.22
COL12A1-211ENST00000615798 PTPN13Q12923 2485 aa7.43□□□□□ -1.22
COL12A1-211ENST00000615798 COX7A2LO14548 114 aa7.43□□□□□ -1.22
COL12A1-211ENST00000615798 TRBV27A0A0K0K1C4 114 aa7.43□□□□□ -1.22
COL12A1-211ENST00000615798 RNF5Q99942 180 aa7.43□□□□□ -1.22
COL12A1-211ENST00000615798 WIPF3A6NGB9 483 aa7.42□□□□□ -1.22
COL12A1-211ENST00000615798 TCL1BO95988 128 aa7.42□□□□□ -1.22
COL12A1-211ENST00000615798 FAM19A5Q7Z5A7 132 aaPredicted RBP7.42□□□□□ -1.22
COL12A1-211ENST00000615798 Q8TAT8 98 aa7.42□□□□□ -1.22
COL12A1-211ENST00000615798 Q9H8V8 135 aa7.42□□□□□ -1.22
COL12A1-211ENST00000615798 DEFB104AQ8WTQ1 72 aa7.42□□□□□ -1.22
COL12A1-211ENST00000615798 SND1-IT1Q9HBX3 110 aa7.42□□□□□ -1.22
COL12A1-211ENST00000615798 AGPAT4-IT1Q9H0P7 198 aa7.42□□□□□ -1.22
COL12A1-211ENST00000615798 TMEM213A2RRL7 107 aa7.42□□□□□ -1.22
COL12A1-211ENST00000615798 FAM19A3Q7Z5A8 133 aa7.42□□□□□ -1.22
COL12A1-211ENST00000615798 MRPL36Q9P0J6 103 aaKnown RBP7.42□□□□□ -1.22
COL12A1-211ENST00000615798 RBAKDNA6NC62 111 aa7.41□□□□□ -1.22
COL12A1-211ENST00000615798 RPL35AP18077 110 aaKnown RBP7.41□□□□□ -1.22
COL12A1-211ENST00000615798 C9orf47Q6ZRZ4 202 aa7.41□□□□□ -1.22
COL12A1-211ENST00000615798 SIGLEC9Q9Y336 463 aa7.41□□□□□ -1.22
COL12A1-211ENST00000615798 Q8N1Y9 231 aa7.41□□□□□ -1.22
COL12A1-211ENST00000615798 VWC2Q2TAL6 325 aa7.41□□□□□ -1.22
COL12A1-211ENST00000615798 PIFOQ8TCI5 191 aa7.41□□□□□ -1.22
COL12A1-211ENST00000615798 C8orf49Q96NF6 230 aa7.41□□□□□ -1.22
COL12A1-211ENST00000615798 DEFB112Q30KQ8 113 aa7.41□□□□□ -1.22
COL12A1-211ENST00000615798 PIK3CD-AS1Q5SR53 167 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms