RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 FGF6P10767 208 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 IL17RELQ6ZVW7 336 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 LINC00527Q9UJ94 153 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 TRBV25-1A0A075B6N4 114 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 C2orf70A6NJV1 201 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 E9PLD3 99 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 HERVK_113P63121 156 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 C5orf56Q8N8D9 126 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 IGHV3OR16-12A0A075B7B8 117 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 IGHV4-61A0A0C4DH41 118 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 FXYD7P58549 80 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 Q6Q795 121 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 CHD3Q12873 2000 aaKnown RBP6.82□□□□□ -1.32
PDE6A-204ENST00000613228 PHF3Q92576 2039 aaKnown RBP6.82□□□□□ -1.32
PDE6A-204ENST00000613228 TRAV25A0A0B4J276 109 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 K7EIM0 57 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 ADAMTS20P59510 1910 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 OVOL3O00110 214 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 IGKV3-20P01619 116 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 GP9P14770 177 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 GTSF1Q8WW33 167 aa6.82□□□□□ -1.32
PDE6A-204ENST00000613228 LOXL1Q08397 574 aaPredicted RBP6.81□□□□□ -1.32
PDE6A-204ENST00000613228 C3orf56Q8N813 242 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 Q8N9W7 124 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 KLHL30-AS1Q8NEE0 82 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 CARD19Q96LW7 228 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 PRR25Q96S07 402 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 G3V318 75 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 NDUFS7O75251 213 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 PRR31Q5SQ13 230 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 NCR2O95944 276 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 C20orf173Q96LM9 149 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 CHCHD5Q9BSY4 110 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 NDPQ00604 133 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 FAM104BQ5XKR9 115 aa6.81□□□□□ -1.32
PDE6A-204ENST00000613228 CPAMD8Q8IZJ3 1885 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 A0A1W2PRX2 142 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 Q8N8P6 123 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 IGHV4-30-2A0A087WSY4 118 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 K7EMT4 169 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 CRYGBP07316 175 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 HLA-DRB4P13762 266 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 EBI3Q14213 229 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 NRGNQ92686 78 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 HLA-DRB4X5D2U9 266 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 LY6LH3BQJ8 138 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 RHODO00212 210 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 VCYO14598 125 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 A0A0B4J2C4 111 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 RBM3P98179 157 aaKnown RBP6.8□□□□□ -1.32
PDE6A-204ENST00000613228 LINC00173Q6ZV60 143 aa6.8□□□□□ -1.32
PDE6A-204ENST00000613228 ZFP36P26651 326 aaKnown RBP6.79□□□□□ -1.32
PDE6A-204ENST00000613228 DEFB112Q30KQ8 113 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 BRK1Q8WUW1 75 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 IGF2BP2-AS1Q96M15 143 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 DKK2Q9UBU2 259 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 LAMTOR3Q9UHA4 124 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 PKIGQ9Y2B9 76 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 C1orf195Q5TG92 126 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 AHCTF1Q8WYP5 2266 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 MRPL55Q7Z7F7 128 aaKnown RBP6.79□□□□□ -1.32
PDE6A-204ENST00000613228 RNF152Q8N8N0 203 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 TP53TG3Q9ULZ0 132 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 TNFRSF13BO14836 293 aaPredicted RBP6.79□□□□□ -1.32
PDE6A-204ENST00000613228 ARMS2P0C7Q2 107 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 CFC1BP0CG36 223 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 CFC1P0CG37 223 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 RITA1Q96K30 269 aa6.79□□□□□ -1.32
PDE6A-204ENST00000613228 A6NDX4 124 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 BRWD1-AS2P59051 145 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 ERCC8Q13216 396 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 TNRC6BQ9UPQ9 1833 aaKnown RBP6.78□□□□□ -1.32
PDE6A-204ENST00000613228 Q8TAT8 98 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 AJUBAQ96IF1 538 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 C8orf49Q96NF6 230 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 A0A087WX48 190 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 K7EMI3 77 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 IGHG2P01859 326 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 XGP55808 180 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 LINC00694P0DN24 101 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 LMO4P61968 165 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 NSUN5P1Q3KNT7 163 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 TRPT1Q86TN4 253 aaKnown RBP6.78□□□□□ -1.32
PDE6A-204ENST00000613228 FAM167A-AS1Q96KT0 104 aa6.78□□□□□ -1.32
PDE6A-204ENST00000613228 A0A1B0GX51 115 aa6.77□□□□□ -1.32
PDE6A-204ENST00000613228 Q71RC1 249 aaPredicted RBP6.77□□□□□ -1.32
PDE6A-204ENST00000613228 GATD1Q8NB37 220 aa6.77□□□□□ -1.32
PDE6A-204ENST00000613228 TMEM213A2RRL7 107 aa6.77□□□□□ -1.33
PDE6A-204ENST00000613228 TRGV2A0A075B6R0 118 aa6.77□□□□□ -1.33
PDE6A-204ENST00000613228 IGKV1-17P01599 117 aa6.77□□□□□ -1.33
PDE6A-204ENST00000613228 RNASE1P07998 156 aaKnown RBP6.77□□□□□ -1.33
PDE6A-204ENST00000613228 PATE2Q6UY27 113 aa6.77□□□□□ -1.33
PDE6A-204ENST00000613228 EXPH5Q8NEV8 1989 aa6.77□□□□□ -1.33
PDE6A-204ENST00000613228 F8VRH5 84 aa6.77□□□□□ -1.33
PDE6A-204ENST00000613228 CTSGP08311 255 aa6.77□□□□□ -1.33
PDE6A-204ENST00000613228 TMEM141Q96I45 108 aa6.77□□□□□ -1.33
PDE6A-204ENST00000613228 MRPL35Q9NZE8 188 aaKnown RBP6.77□□□□□ -1.33
PDE6A-204ENST00000613228 TRBV10-2A0A0K0K1G8 114 aa6.77□□□□□ -1.33
PDE6A-204ENST00000613228 SOCS3O14543 225 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms