RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 H3BRM9 83 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 SAMD5Q5TGI4 173 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 OR1N2Q8NGR9 330 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 FAM110DQ8TAY7 271 aaPredicted RBP10.76□□□□□ -0.69
COL6A1-207ENST00000612273 RPL39LQ96EH5 51 aaKnown RBP10.76□□□□□ -0.69
COL6A1-207ENST00000612273 SIRPDQ9H106 197 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 C11orf71Q6IPW1 123 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 AMTNQ6UX39 209 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 OR9G4Q8NGQ1 327 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 COL25A1Q9BXS0 654 aaPredicted RBP10.76□□□□□ -0.69
COL6A1-207ENST00000612273 ITPR1Q14643 2758 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 DPM2O94777 84 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 IGKV3-20P01619 116 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 EEF1AKMT3Q96AZ1 226 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 C20orf173Q96LM9 149 aa10.76□□□□□ -0.69
COL6A1-207ENST00000612273 PPBPP02775 128 aa10.75□□□□□ -0.69
COL6A1-207ENST00000612273 SMIM13P0DJ93 91 aa10.75□□□□□ -0.69
COL6A1-207ENST00000612273 FABP2P12104 132 aa10.75□□□□□ -0.69
COL6A1-207ENST00000612273 ATP5G2Q06055 141 aa10.75□□□□□ -0.69
COL6A1-207ENST00000612273 PKD1L2Q7Z442 2459 aa10.75□□□□□ -0.69
COL6A1-207ENST00000612273 RNASE4P34096 147 aaKnown RBP10.75□□□□□ -0.69
COL6A1-207ENST00000612273 OR4X2Q8NGF9 303 aa10.75□□□□□ -0.69
COL6A1-207ENST00000612273 A0A1W2PPM0 123 aa10.75□□□□□ -0.69
COL6A1-207ENST00000612273 MINOS1Q5TGZ0 78 aa10.75□□□□□ -0.69
COL6A1-207ENST00000612273 MINOS1-NBL1R4GNA1 71 aa10.75□□□□□ -0.69
COL6A1-207ENST00000612273 SONP18583 2426 aaKnown RBP10.74□□□□□ -0.69
COL6A1-207ENST00000612273 GNRH2O43555 120 aa10.74□□□□□ -0.69
COL6A1-207ENST00000612273 LINC01559Q495D7 138 aa10.74□□□□□ -0.69
COL6A1-207ENST00000612273 WNK1Q9H4A3 2382 aa10.74□□□□□ -0.69
COL6A1-207ENST00000612273 CENPVL3A0A0U1RRI6 287 aa10.74□□□□□ -0.69
COL6A1-207ENST00000612273 K7EP34 96 aa10.74□□□□□ -0.69
COL6A1-207ENST00000612273 PF4V1P10720 104 aa10.74□□□□□ -0.69
COL6A1-207ENST00000612273 NBL1P41271 181 aa10.74□□□□□ -0.69
COL6A1-207ENST00000612273 LAGE3Q14657 143 aa10.74□□□□□ -0.69
COL6A1-207ENST00000612273 ZNF48Q96MX3 618 aaPredicted RBP10.74□□□□□ -0.69
COL6A1-207ENST00000612273 IGHV7-4-1A0A0J9YVY3 117 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 EDN2P20800 178 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 ARL3P36405 182 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 HIST1H4GQ99525 98 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 CFAP46Q8IYW2 2715 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 NPFFO15130 113 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 UBE2E1P51965 193 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 KLRB1Q12918 225 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 SCGB2A2Q13296 93 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 Q8N8P6 123 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 PHLDA3Q9Y5J5 127 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 ABCA12Q86UK0 2595 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 ABCA2Q9BZC7 2435 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 LRRK2Q5S007 2527 aa10.73□□□□□ -0.69
COL6A1-207ENST00000612273 Q6ZS46 218 aa10.72□□□□□ -0.69
COL6A1-207ENST00000612273 AJUBAQ96IF1 538 aa10.72□□□□□ -0.69
COL6A1-207ENST00000612273 CYSLTR1Q9Y271 337 aa10.72□□□□□ -0.69
COL6A1-207ENST00000612273 TRAV41A0A0B4J266 112 aa10.72□□□□□ -0.69
COL6A1-207ENST00000612273 FBXL19-AS1Q494R0 122 aa10.72□□□□□ -0.69
COL6A1-207ENST00000612273 SCGB3A1Q96QR1 104 aa10.72□□□□□ -0.69
COL6A1-207ENST00000612273 JPT2Q9H910 190 aa10.72□□□□□ -0.69
COL6A1-207ENST00000612273 EBI3Q14213 229 aa10.71□□□□□ -0.69
COL6A1-207ENST00000612273 UFSP1Q6NVU6 142 aa10.71□□□□□ -0.69
COL6A1-207ENST00000612273 DPF1Q92782 380 aa10.71□□□□□ -0.69
COL6A1-207ENST00000612273 C19orf84I3L1E1 186 aa10.71□□□□□ -0.69
COL6A1-207ENST00000612273 BLCAPP62952 87 aa10.71□□□□□ -0.69
COL6A1-207ENST00000612273 NRACQ8N912 160 aa10.71□□□□□ -0.69
COL6A1-207ENST00000612273 ANXA2RQ3ZCQ2 193 aa10.71□□□□□ -0.7
COL6A1-207ENST00000612273 F5H697 171 aa10.7□□□□□ -0.7
COL6A1-207ENST00000612273 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.7□□□□□ -0.7
COL6A1-207ENST00000612273 LMO4P61968 165 aa10.7□□□□□ -0.7
COL6A1-207ENST00000612273 H3BMG7 143 aa10.7□□□□□ -0.7
COL6A1-207ENST00000612273 TMEM95Q3KNT9 176 aa10.7□□□□□ -0.7
COL6A1-207ENST00000612273 FAM74A4Q5TZK3 123 aa10.7□□□□□ -0.7
COL6A1-207ENST00000612273 A0A087WWL8 130 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 TEX48A0A1B0GUV7 120 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 OOSP1A8MZH6 123 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 C5orf56Q8N8D9 126 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 NACAE9PAV3 2078 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 IGLV2-18A0A075B6J9 118 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 ATP5LO75964 103 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 SRSF1Q07955 248 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL6A1-207ENST00000612273 COX8CQ7Z4L0 72 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 OR10J6PQ8NGY7 276 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 CNFNQ9BYD5 112 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 PIEZO1Q92508 2521 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 IGHV4-38-2P0DP08 117 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 CD300EQ496F6 205 aaPredicted RBP10.69□□□□□ -0.7
COL6A1-207ENST00000612273 CCDC168Q8NDH2 2452 aa10.69□□□□□ -0.7
COL6A1-207ENST00000612273 C1orf122Q6ZSJ8 110 aa10.68□□□□□ -0.7
COL6A1-207ENST00000612273 SH2D6Q7Z4S9 175 aa10.68□□□□□ -0.7
COL6A1-207ENST00000612273 TGFAP01135 160 aa10.68□□□□□ -0.7
COL6A1-207ENST00000612273 HTN1P15515 57 aa10.68□□□□□ -0.7
COL6A1-207ENST00000612273 RAB9AP51151 201 aa10.68□□□□□ -0.7
COL6A1-207ENST00000612273 WFDC2Q14508 124 aa10.68□□□□□ -0.7
COL6A1-207ENST00000612273 KLHL30-AS1Q8NEE0 82 aa10.68□□□□□ -0.7
COL6A1-207ENST00000612273 H3BUX3 64 aa10.68□□□□□ -0.7
COL6A1-207ENST00000612273 SCGB1D4Q6XE38 83 aa10.68□□□□□ -0.7
COL6A1-207ENST00000612273 SMIM2Q9BVW6 85 aa10.68□□□□□ -0.7
COL6A1-207ENST00000612273 NPFFR1Q9GZQ6 430 aa10.68□□□□□ -0.7
COL6A1-207ENST00000612273 CEND1Q8N111 149 aa10.67□□□□□ -0.7
COL6A1-207ENST00000612273 CSTL1Q9H114 145 aa10.67□□□□□ -0.7
COL6A1-207ENST00000612273 TRBV7-1A0A0A6YYK4 115 aa10.67□□□□□ -0.7
COL6A1-207ENST00000612273 OR11H12B2RN74 326 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms