RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 GCSHP23434 173 aa9.34□□□□□ -0.91
LINC00116-203ENST00000611969 MRPL23Q16540 153 aaKnown RBP9.34□□□□□ -0.91
LINC00116-203ENST00000611969 TDRG1Q3Y452 100 aa9.34□□□□□ -0.91
LINC00116-203ENST00000611969 INO80EQ8NBZ0 244 aaPredicted RBP9.34□□□□□ -0.91
LINC00116-203ENST00000611969 TNFSF18Q9UNG2 199 aa9.34□□□□□ -0.91
LINC00116-203ENST00000611969 ICOSQ9Y6W8 199 aa9.34□□□□□ -0.91
LINC00116-203ENST00000611969 SIVA1O15304 175 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 GIPP09681 153 aaPredicted RBP9.33□□□□□ -0.92
LINC00116-203ENST00000611969 STAG3L2P0CL84 134 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 STAG3L3P0CL85 134 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 CDC34P49427 236 aaPredicted RBP9.33□□□□□ -0.92
LINC00116-203ENST00000611969 FHL2Q14192 279 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 MUC21Q5SSG8 566 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 Q6ZQT7 251 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 GOLT1AQ6ZVE7 132 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 HSD17B11Q8NBQ5 300 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 SUN5Q8TC36 379 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 RAB24Q969Q5 203 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 KCNS1Q96KK3 526 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 TREM1Q9NP99 234 aa9.33□□□□□ -0.92
LINC00116-203ENST00000611969 MRPL16Q9NX20 251 aaKnown RBP9.33□□□□□ -0.92
LINC00116-203ENST00000611969 FBLL1A6NHQ2 334 aaKnown RBP9.32□□□□□ -0.92
LINC00116-203ENST00000611969 ATP6V0CP27449 155 aa9.32□□□□□ -0.92
LINC00116-203ENST00000611969 CRYBA4P53673 196 aa9.32□□□□□ -0.92
LINC00116-203ENST00000611969 TMEM183BQ1AE95 376 aa9.32□□□□□ -0.92
LINC00116-203ENST00000611969 TMEM183AQ8IXX5 376 aa9.32□□□□□ -0.92
LINC00116-203ENST00000611969 C5orf17Q8NAS9 161 aa9.32□□□□□ -0.92
LINC00116-203ENST00000611969 NDFIP1Q9BT67 221 aa9.32□□□□□ -0.92
LINC00116-203ENST00000611969 ACTR3CQ9C0K3 210 aaPredicted RBP9.32□□□□□ -0.92
LINC00116-203ENST00000611969 TMEM167BQ9NRX6 74 aa9.32□□□□□ -0.92
LINC00116-203ENST00000611969 BORCS7-ASMTA0A0B4J1R7 106 aa9.31□□□□□ -0.92
LINC00116-203ENST00000611969 TRGV4A0A0C4DH28 118 aa9.31□□□□□ -0.92
LINC00116-203ENST00000611969 NXPH4O95158 308 aa9.31□□□□□ -0.92
LINC00116-203ENST00000611969 CXorf1O96002 111 aa9.31□□□□□ -0.92
LINC00116-203ENST00000611969 ARL14EPLP0DKL9 152 aa9.31□□□□□ -0.92
LINC00116-203ENST00000611969 RPH3ALQ9UNE2 315 aa9.31□□□□□ -0.92
LINC00116-203ENST00000611969 K7EP13 123 aa9.3□□□□□ -0.92
LINC00116-203ENST00000611969 M0R2P5 195 aa9.3□□□□□ -0.92
LINC00116-203ENST00000611969 HMGB3O15347 200 aaKnown RBP9.3□□□□□ -0.92
LINC00116-203ENST00000611969 CIDEAO60543 219 aa9.3□□□□□ -0.92
LINC00116-203ENST00000611969 EIF3GO75821 320 aaKnown RBP eCLIP9.3□□□□□ -0.92
LINC00116-203ENST00000611969 IGHV3-53P01767 116 aa9.3□□□□□ -0.92
LINC00116-203ENST00000611969 ORM1P02763 201 aa9.3□□□□□ -0.92
LINC00116-203ENST00000611969 GCHFRP30047 84 aa9.3□□□□□ -0.92
LINC00116-203ENST00000611969 SERTAD4-AS1Q5TG53 156 aa9.3□□□□□ -0.92
LINC00116-203ENST00000611969 NEGR1Q7Z3B1 354 aa9.3□□□□□ -0.92
LINC00116-203ENST00000611969 C8orf49Q96NF6 230 aa9.3□□□□□ -0.92
LINC00116-203ENST00000611969 SDF2L1Q9HCN8 221 aa9.3□□□□□ -0.92
LINC00116-203ENST00000611969 LRP1Q07954 4544 aaKnown RBP9.3□□□□□ -0.92
LINC00116-203ENST00000611969 TRAV9-2A0A087WT02 112 aa9.29□□□□□ -0.92
LINC00116-203ENST00000611969 TAAR5O14804 337 aa9.29□□□□□ -0.92
LINC00116-203ENST00000611969 TCRAP04437 139 aa9.29□□□□□ -0.92
LINC00116-203ENST00000611969 SUMO1P63165 101 aaKnown RBP9.29□□□□□ -0.92
LINC00116-203ENST00000611969 SAPCD1Q5SSQ6 148 aa9.29□□□□□ -0.92
LINC00116-203ENST00000611969 LYPD5Q6UWN5 251 aa9.29□□□□□ -0.92
LINC00116-203ENST00000611969 SH2D6Q7Z4S9 175 aa9.29□□□□□ -0.92
LINC00116-203ENST00000611969 SYT8Q8NBV8 401 aa9.29□□□□□ -0.92
LINC00116-203ENST00000611969 TMEM70Q9BUB7 260 aa9.29□□□□□ -0.92
LINC00116-203ENST00000611969 TRAV8-1A0A0A6YYK1 113 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 TRAV4A0A0B4J268 109 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 IGHV3-16A0A0C4DH30 117 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 GNRH2O43555 120 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 Q5BKY6 102 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 OR4C5Q8NGB2 326 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 PCNPQ8WW12 178 aaKnown RBP9.28□□□□□ -0.92
LINC00116-203ENST00000611969 TVP23CQ96ET8 276 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 ZNF479Q96JC4 524 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 TXNDC17Q9BRA2 123 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 NKX6-2Q9C056 277 aaPredicted RBP9.28□□□□□ -0.92
LINC00116-203ENST00000611969 FAM30AQ9NZY2 134 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 NAGKQ9UJ70 344 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 EPDR1Q9UM22 224 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 PLA2G2DQ9UNK4 145 aa9.28□□□□□ -0.92
LINC00116-203ENST00000611969 A0A1W2PRE2 83 aa9.27□□□□□ -0.93
LINC00116-203ENST00000611969 C9JCJ5 164 aa9.27□□□□□ -0.93
LINC00116-203ENST00000611969 SRIP30626 198 aa9.27□□□□□ -0.93
LINC00116-203ENST00000611969 FLI1Q01543 452 aaPredicted RBP9.27□□□□□ -0.93
LINC00116-203ENST00000611969 NFE4Q86UQ8 179 aa9.27□□□□□ -0.93
LINC00116-203ENST00000611969 OR2T35Q8NGX2 323 aa9.27□□□□□ -0.93
LINC00116-203ENST00000611969 PSG8Q9UQ74 426 aa9.27□□□□□ -0.93
LINC00116-203ENST00000611969 BOLA1Q9Y3E2 137 aa9.27□□□□□ -0.93
LINC00116-203ENST00000611969 FXYD6-FXYD2A0A087WZ82 144 aa9.26□□□□□ -0.93
LINC00116-203ENST00000611969 IGLV5-52A0A0A0MRZ9 124 aa9.26□□□□□ -0.93
LINC00116-203ENST00000611969 GYPEP15421 78 aa9.26□□□□□ -0.93
LINC00116-203ENST00000611969 GNG5P63218 68 aa9.26□□□□□ -0.93
LINC00116-203ENST00000611969 RGS21Q2M5E4 152 aa9.26□□□□□ -0.93
LINC00116-203ENST00000611969 ZFP69Q49AA0 526 aa9.26□□□□□ -0.93
LINC00116-203ENST00000611969 SMUG1Q53HV7 270 aa9.26□□□□□ -0.93
LINC00116-203ENST00000611969 RPL7L1Q6DKI1 246 aaKnown RBP9.26□□□□□ -0.93
LINC00116-203ENST00000611969 CYB561D1Q8N8Q1 229 aa9.26□□□□□ -0.93
LINC00116-203ENST00000611969 TMEM75Q8N9X5 138 aa9.26□□□□□ -0.93
LINC00116-203ENST00000611969 PTH2Q96A98 100 aa9.26□□□□□ -0.93
LINC00116-203ENST00000611969 CTXND1A0A1B0GTU2 59 aa9.25□□□□□ -0.93
LINC00116-203ENST00000611969 K7EQD1 137 aa9.25□□□□□ -0.93
LINC00116-203ENST00000611969 TYMSP04818 313 aa9.25□□□□□ -0.93
LINC00116-203ENST00000611969 PFN1P07737 140 aaKnown RBP9.25□□□□□ -0.93
LINC00116-203ENST00000611969 SFTA3P0C7M3 94 aa9.25□□□□□ -0.93
LINC00116-203ENST00000611969 PPT1P50897 306 aa9.25□□□□□ -0.93
LINC00116-203ENST00000611969 SH3BGRL3Q9H299 93 aa9.25□□□□□ -0.93
LINC00116-203ENST00000611969 RNF222A6NCQ9 220 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms