RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 MRGPRG-AS1Q2M3A8 158 aa8.41□□□□□ -1.06
PCDHGC3-202ENST00000611950 PRO0461Q9UI25 63 aa8.41□□□□□ -1.06
PCDHGC3-202ENST00000611950 PKIGQ9Y2B9 76 aa8.41□□□□□ -1.06
PCDHGC3-202ENST00000611950 C2orf70A6NJV1 201 aa8.41□□□□□ -1.06
PCDHGC3-202ENST00000611950 SHISA9B4DS77 424 aa8.41□□□□□ -1.06
PCDHGC3-202ENST00000611950 TMEM219Q86XT9 240 aa8.41□□□□□ -1.06
PCDHGC3-202ENST00000611950 BCL6BQ8N143 479 aaPredicted RBP8.41□□□□□ -1.06
PCDHGC3-202ENST00000611950 URB1-AS1Q96HZ7 61 aa8.41□□□□□ -1.06
PCDHGC3-202ENST00000611950 MTORP42345 2549 aa8.41□□□□□ -1.06
PCDHGC3-202ENST00000611950 IGHV3-35A0A0C4DH35 117 aa8.4□□□□□ -1.06
PCDHGC3-202ENST00000611950 E7EQL1 145 aa8.4□□□□□ -1.06
PCDHGC3-202ENST00000611950 TMEM86BQ8N661 226 aa8.4□□□□□ -1.06
PCDHGC3-202ENST00000611950 LINC01560Q8TB33 94 aa8.4□□□□□ -1.06
PCDHGC3-202ENST00000611950 INS-IGF2F8WCM5 200 aa8.4□□□□□ -1.06
PCDHGC3-202ENST00000611950 IGHV3-23P01764 117 aa8.4□□□□□ -1.06
PCDHGC3-202ENST00000611950 FXYD7P58549 80 aa8.4□□□□□ -1.06
PCDHGC3-202ENST00000611950 TMEM155Q4W5P6 130 aa8.4□□□□□ -1.06
PCDHGC3-202ENST00000611950 FAM110DQ8TAY7 271 aaPredicted RBP8.4□□□□□ -1.06
PCDHGC3-202ENST00000611950 PDZD2O15018 2839 aa8.4□□□□□ -1.07
PCDHGC3-202ENST00000611950 M0R3E3 92 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 GAGE13Q4V321 117 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 LINC00311Q8N616 119 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 C18orf15Q96N68 181 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 RPP21Q9H633 154 aaKnown RBP8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 C7orf69Q9H7B7 122 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 C1RLQ9NZP8 487 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 SPG11Q96JI7 2443 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 TCRAP04437 139 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 COX8AP10176 69 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 HBBP68871 147 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 C21orf62Q9NYP8 219 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 CHEK1O14757 476 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 GP9P14770 177 aa8.39□□□□□ -1.07
PCDHGC3-202ENST00000611950 A0A1B0GWB2 263 aa8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 CRLF1O75462 422 aa8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 THAP8Q8NA92 274 aa8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 SRSF12Q8WXF0 261 aaKnown RBP8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 IGHV1-3A0A0C4DH29 117 aa8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 A8MZ25 164 aa8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 CRXO43186 299 aaPredicted RBP8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 MYCNOSP40205 109 aa8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 HES1Q14469 280 aa8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 IGFL4Q6B9Z1 124 aa8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 ZMAT4Q9H898 229 aa8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 KAAG1Q9UBP8 84 aa8.38□□□□□ -1.07
PCDHGC3-202ENST00000611950 IGHV1-24A0A0C4DH33 117 aa8.37□□□□□ -1.07
PCDHGC3-202ENST00000611950 TMEM70Q9BUB7 260 aa8.37□□□□□ -1.07
PCDHGC3-202ENST00000611950 SLC25A39Q9BZJ4 359 aaPredicted RBP8.37□□□□□ -1.07
PCDHGC3-202ENST00000611950 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.37□□□□□ -1.07
PCDHGC3-202ENST00000611950 H3BMG7 143 aa8.37□□□□□ -1.07
PCDHGC3-202ENST00000611950 ARMS2P0C7Q2 107 aa8.37□□□□□ -1.07
PCDHGC3-202ENST00000611950 SMIM13P0DJ93 91 aa8.37□□□□□ -1.07
PCDHGC3-202ENST00000611950 Q5XG85 94 aa8.37□□□□□ -1.07
PCDHGC3-202ENST00000611950 FAM231DQ6ZW35 169 aa8.37□□□□□ -1.07
PCDHGC3-202ENST00000611950 NFE4Q86UQ8 179 aa8.37□□□□□ -1.07
PCDHGC3-202ENST00000611950 LOC389332A0A1B0GUA5 103 aa8.36□□□□□ -1.07
PCDHGC3-202ENST00000611950 A8MWL6 223 aa8.36□□□□□ -1.07
PCDHGC3-202ENST00000611950 ATP5LO75964 103 aa8.36□□□□□ -1.07
PCDHGC3-202ENST00000611950 NDUFA7O95182 113 aa8.36□□□□□ -1.07
PCDHGC3-202ENST00000611950 HERVK_113P63121 156 aa8.36□□□□□ -1.07
PCDHGC3-202ENST00000611950 CUBNO60494 3623 aa8.36□□□□□ -1.07
PCDHGC3-202ENST00000611950 A0A1B0GXF2 115 aa8.36□□□□□ -1.07
PCDHGC3-202ENST00000611950 TEX22C9J3V5 150 aa8.36□□□□□ -1.07
PCDHGC3-202ENST00000611950 TIMM23O14925 209 aa8.36□□□□□ -1.07
PCDHGC3-202ENST00000611950 LEPROTL1O95214 131 aa8.36□□□□□ -1.07
PCDHGC3-202ENST00000611950 MLST8Q9BVC4 326 aa8.36□□□□□ -1.07
PCDHGC3-202ENST00000611950 TMEM262E9PQX1 116 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 IL4P05112 153 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 NMUP48645 174 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 Q86TA4 180 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 TEX45Q8NA69 505 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 F11RQ9Y624 299 aaKnown RBP8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 TRAV4A0A0B4J268 109 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 BUB1B-PAK6H3BSN5 160 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 LTAP01374 205 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 LINC00336Q6ZUF6 198 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 TRPT1Q86TN4 253 aaKnown RBP8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 IL17DQ8TAD2 202 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 C8orf49Q96NF6 230 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 TRGV9Q99603 122 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 SPANXCQ9NY87 97 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 RABAC1Q9UI14 185 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 OOSP1A8MZH6 123 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 IGKV1-17P01599 117 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 IGLV1-47P01700 117 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 OR10J6PQ8NGY7 276 aa8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 WIPF2Q8TF74 440 aaPredicted RBP8.35□□□□□ -1.07
PCDHGC3-202ENST00000611950 E9PLD3 99 aa8.34□□□□□ -1.07
PCDHGC3-202ENST00000611950 SNCGO76070 127 aa8.34□□□□□ -1.07
PCDHGC3-202ENST00000611950 FAM120AOSQ5T036 256 aa8.34□□□□□ -1.07
PCDHGC3-202ENST00000611950 WFDC3Q8IUB2 231 aa8.34□□□□□ -1.07
PCDHGC3-202ENST00000611950 FMC1Q96HJ9 113 aa8.34□□□□□ -1.07
PCDHGC3-202ENST00000611950 CARD19Q96LW7 228 aa8.34□□□□□ -1.07
PCDHGC3-202ENST00000611950 TMEM191AQ9H0A3 160 aa8.34□□□□□ -1.07
PCDHGC3-202ENST00000611950 NF1P21359 2839 aa8.34□□□□□ -1.08
PCDHGC3-202ENST00000611950 C19orf71A6NCJ1 209 aa8.33□□□□□ -1.08
PCDHGC3-202ENST00000611950 PVRIGQ6DKI7 326 aa8.33□□□□□ -1.08
PCDHGC3-202ENST00000611950 KLF12Q9Y4X4 402 aa8.33□□□□□ -1.08
PCDHGC3-202ENST00000611950 IGHV3OR16-13A0A075B7E8 117 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms