RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 SPCS1Q9Y6A9 102 aa10.21□□□□□ -0.78
TCF3-220ENST00000611869 ZNF815PA8K554 130 aa10.2□□□□□ -0.78
TCF3-220ENST00000611869 RPL13AP40429 203 aaKnown RBP10.2□□□□□ -0.78
TCF3-220ENST00000611869 SMPXQ9UHP9 88 aa10.2□□□□□ -0.78
TCF3-220ENST00000611869 POLQO75417 2590 aa10.2□□□□□ -0.78
TCF3-220ENST00000611869 J3QLI3 93 aa10.2□□□□□ -0.78
TCF3-220ENST00000611869 CRYGBP07316 175 aa10.2□□□□□ -0.78
TCF3-220ENST00000611869 MEIG1Q5JSS6 88 aa10.2□□□□□ -0.78
TCF3-220ENST00000611869 AJUBAQ96IF1 538 aa10.2□□□□□ -0.78
TCF3-220ENST00000611869 YPEL4Q96NS1 127 aa10.2□□□□□ -0.78
TCF3-220ENST00000611869 GATA1P15976 413 aaPredicted RBP10.2□□□□□ -0.78
TCF3-220ENST00000611869 DEFB1P60022 68 aa10.2□□□□□ -0.78
TCF3-220ENST00000611869 VCYO14598 125 aa10.19□□□□□ -0.78
TCF3-220ENST00000611869 C1orf159Q96HA4 380 aa10.19□□□□□ -0.78
TCF3-220ENST00000611869 PRORYQ9H606 182 aa10.19□□□□□ -0.78
TCF3-220ENST00000611869 CD28P10747 220 aa10.19□□□□□ -0.78
TCF3-220ENST00000611869 HSD52Q0P140 79 aa10.19□□□□□ -0.78
TCF3-220ENST00000611869 DEFB136Q30KP8 78 aa10.19□□□□□ -0.78
TCF3-220ENST00000611869 LINC00173Q6ZV60 143 aa10.19□□□□□ -0.78
TCF3-220ENST00000611869 NEGR1Q7Z3B1 354 aa10.19□□□□□ -0.78
TCF3-220ENST00000611869 TMEM262E9PQX1 116 aa10.19□□□□□ -0.78
TCF3-220ENST00000611869 IGHV3-53P01767 116 aa10.19□□□□□ -0.78
TCF3-220ENST00000611869 OR9G4Q8NGQ1 327 aa10.19□□□□□ -0.78
TCF3-220ENST00000611869 LY6LH3BQJ8 138 aa10.18□□□□□ -0.78
TCF3-220ENST00000611869 CRXO43186 299 aaPredicted RBP10.18□□□□□ -0.78
TCF3-220ENST00000611869 KLF5Q13887 457 aaPredicted RBP10.18□□□□□ -0.78
TCF3-220ENST00000611869 C11orf71Q6IPW1 123 aa10.18□□□□□ -0.78
TCF3-220ENST00000611869 BCL6BQ8N143 479 aaPredicted RBP10.18□□□□□ -0.78
TCF3-220ENST00000611869 CFAP54Q96N23 3096 aa10.18□□□□□ -0.78
TCF3-220ENST00000611869 TRGV1A0A0A0MS02 117 aa10.18□□□□□ -0.78
TCF3-220ENST00000611869 DLEU1O43261 78 aa10.18□□□□□ -0.78
TCF3-220ENST00000611869 GNRH2O43555 120 aa10.18□□□□□ -0.78
TCF3-220ENST00000611869 VPREB3Q9UKI3 123 aa10.18□□□□□ -0.78
TCF3-220ENST00000611869 LINC01559Q495D7 138 aa10.18□□□□□ -0.78
TCF3-220ENST00000611869 XCL2Q9UBD3 114 aa10.18□□□□□ -0.78
TCF3-220ENST00000611869 H3BUA1 57 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 TRBV12-3P01733 135 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 RPL35AP18077 110 aaKnown RBP10.17□□□□□ -0.78
TCF3-220ENST00000611869 COTL1Q14019 142 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 Q8N8P6 123 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 LINC01619G3V211 115 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 SEC11AP67812 179 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 CIRBPQ14011 172 aaKnown RBP10.17□□□□□ -0.78
TCF3-220ENST00000611869 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 MRAP2Q96G30 205 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 CIDEAO60543 219 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 CDKN1BP46527 198 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 ZNF415Q09FC8 603 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 UNQ9165/PRO28630Q6UXU0 137 aa10.17□□□□□ -0.78
TCF3-220ENST00000611869 MRPS16Q9Y3D3 137 aaKnown RBP10.17□□□□□ -0.78
TCF3-220ENST00000611869 C19orf71A6NCJ1 209 aa10.16□□□□□ -0.78
TCF3-220ENST00000611869 FSTL3O95633 263 aa10.16□□□□□ -0.78
TCF3-220ENST00000611869 ELANEP08246 267 aa10.16□□□□□ -0.78
TCF3-220ENST00000611869 RIPPLY3P57055 190 aa10.16□□□□□ -0.78
TCF3-220ENST00000611869 TOMM7Q9P0U1 55 aa10.16□□□□□ -0.78
TCF3-220ENST00000611869 HOXD3P31249 432 aaPredicted RBP10.16□□□□□ -0.78
TCF3-220ENST00000611869 ZNF747Q9BV97 191 aa10.16□□□□□ -0.78
TCF3-220ENST00000611869 JMJD1CQ15652 2540 aa10.16□□□□□ -0.78
TCF3-220ENST00000611869 COX6CP09669 75 aa10.15□□□□□ -0.78
TCF3-220ENST00000611869 PRRC2AP48634 2157 aaKnown RBP10.15□□□□□ -0.78
TCF3-220ENST00000611869 IGHV1OR15-1A0A075B7D0 117 aa10.15□□□□□ -0.78
TCF3-220ENST00000611869 HTN3P15516 51 aa10.15□□□□□ -0.78
TCF3-220ENST00000611869 PHLDA1Q8WV24 401 aaPredicted RBP10.15□□□□□ -0.78
TCF3-220ENST00000611869 TMEM101Q96IK0 257 aa10.15□□□□□ -0.78
TCF3-220ENST00000611869 ZNF462Q96JM2 2506 aa10.15□□□□□ -0.78
TCF3-220ENST00000611869 TRGV4A0A0C4DH28 118 aa10.15□□□□□ -0.78
TCF3-220ENST00000611869 TNFRSF13BO14836 293 aaPredicted RBP10.15□□□□□ -0.78
TCF3-220ENST00000611869 PLNP26678 52 aa10.15□□□□□ -0.78
TCF3-220ENST00000611869 C16orf54Q6UWD8 224 aa10.15□□□□□ -0.78
TCF3-220ENST00000611869 CCDC140Q96MF4 163 aa10.15□□□□□ -0.78
TCF3-220ENST00000611869 WDFY4Q6ZS81 3184 aa10.15□□□□□ -0.78
TCF3-220ENST00000611869 RBAKDNA6NC62 111 aa10.15□□□□□ -0.79
TCF3-220ENST00000611869 INSP01308 110 aa10.15□□□□□ -0.79
TCF3-220ENST00000611869 SMIM2Q9BVW6 85 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 TP53TG1Q9Y2A0 90 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 EPG5Q9HCE0 2579 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 PKD1L2Q7Z442 2459 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 KIR2DL5BA0A0G2JN68 375 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 KIR2DL5BA0A0G2JPC4 375 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 SDHAF1A6NFY7 115 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 IGHG2P01859 326 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 KIR2DL5AQ8N109 375 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 A0A0U1RRA0 63 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 DEFB113Q30KQ7 82 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 MRPL53Q96EL3 112 aaKnown RBP10.14□□□□□ -0.79
TCF3-220ENST00000611869 ZNF48Q96MX3 618 aaPredicted RBP10.14□□□□□ -0.79
TCF3-220ENST00000611869 MLST8Q9BVC4 326 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 DKK2Q9UBU2 259 aa10.14□□□□□ -0.79
TCF3-220ENST00000611869 GDF5OSQ5U4N7 250 aa10.13□□□□□ -0.79
TCF3-220ENST00000611869 PCSK5Q92824 1860 aa10.13□□□□□ -0.79
TCF3-220ENST00000611869 TRAV2A0A0B4J234 112 aa10.13□□□□□ -0.79
TCF3-220ENST00000611869 Q71RC1 249 aaPredicted RBP10.13□□□□□ -0.79
TCF3-220ENST00000611869 MRPL35Q9NZE8 188 aaKnown RBP10.13□□□□□ -0.79
TCF3-220ENST00000611869 IGHV3-16A0A0C4DH30 117 aa10.13□□□□□ -0.79
TCF3-220ENST00000611869 H3BRM9 83 aa10.12□□□□□ -0.79
TCF3-220ENST00000611869 LGALS9BQ3B8N2 356 aa10.12□□□□□ -0.79
TCF3-220ENST00000611869 LGALS9CQ6DKI2 356 aa10.12□□□□□ -0.79
TCF3-220ENST00000611869 LINC01549A6NIU2 74 aa10.12□□□□□ -0.79
TCF3-220ENST00000611869 ZNF80P51504 273 aaPredicted RBP10.12□□□□□ -0.79
TCF3-220ENST00000611869 LENEPQ9Y5L5 61 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms