RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 F6UB75 175 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 MSMBP08118 114 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 ZNF493Q6ZR52 646 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 SPOCK3Q9BQ16 436 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 LINC01548A6NM66 108 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 H3BRM9 83 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 C9orf118A6NHY6 69 aa6.71□□□□□ -1.33
LIG4-204ENST00000611712 EMP1P54849 157 aa6.71□□□□□ -1.33
LIG4-204ENST00000611712 C2orf66Q6UXQ4 117 aa6.71□□□□□ -1.33
LIG4-204ENST00000611712 SMIM2Q9BVW6 85 aa6.71□□□□□ -1.33
LIG4-204ENST00000611712 SPTBN5Q9NRC6 3674 aaKnown RBP6.71□□□□□ -1.33
LIG4-204ENST00000611712 HIVEP3Q5T1R4 2406 aa6.71□□□□□ -1.34
LIG4-204ENST00000611712 CDSNQ15517 529 aa6.71□□□□□ -1.34
LIG4-204ENST00000611712 OCIAD2Q56VL3 154 aa6.71□□□□□ -1.34
LIG4-204ENST00000611712 PAPPA-AS1Q5QFB9 102 aa6.71□□□□□ -1.34
LIG4-204ENST00000611712 Q71RC1 249 aaPredicted RBP6.71□□□□□ -1.34
LIG4-204ENST00000611712 C5orf56Q8N8D9 126 aa6.71□□□□□ -1.34
LIG4-204ENST00000611712 RAI1Q7Z5J4 1906 aaPredicted RBP6.71□□□□□ -1.34
LIG4-204ENST00000611712 IGHV4-61A0A0C4DH41 118 aa6.71□□□□□ -1.34
LIG4-204ENST00000611712 RIPPLY3P57055 190 aa6.71□□□□□ -1.34
LIG4-204ENST00000611712 MRGPRG-AS1Q2M3A8 158 aa6.71□□□□□ -1.34
LIG4-204ENST00000611712 A0A1B0GWB2 263 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 TAX1BP3O14907 124 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 SPATA12Q7Z6I5 190 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 MRPL53Q96EL3 112 aaKnown RBP6.7□□□□□ -1.34
LIG4-204ENST00000611712 URB1-AS1Q96HZ7 61 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 SORL1Q92673 2214 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 PTPN13Q12923 2485 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 CRXO43186 299 aaPredicted RBP6.7□□□□□ -1.34
LIG4-204ENST00000611712 IGHV4-39P01824 125 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 NEGR1Q7Z3B1 354 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 RAX2Q96IS3 184 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 DUX3Q96PT4 197 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 TNFRSF18Q9Y5U5 241 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 NDUFS8O00217 210 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 DUSP14O95147 198 aaKnown RBP6.7□□□□□ -1.34
LIG4-204ENST00000611712 BLCAPP62952 87 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 CCDC140Q96MF4 163 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 TTTY13Q9BZ97 58 aa6.7□□□□□ -1.34
LIG4-204ENST00000611712 VCYO14598 125 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 HOXA3O43365 443 aaPredicted RBP6.69□□□□□ -1.34
LIG4-204ENST00000611712 GNRH2O43555 120 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 CIDEAO60543 219 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 DEFB1P60022 68 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 MAPK1IP1LQ8NDC0 245 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 IGHV4-38-2P0DP08 117 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 SYNJ2BPP57105 145 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 LMO4P61968 165 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 PIP4P2Q8N4L2 257 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 ZNF418Q8TF45 676 aaPredicted RBP6.69□□□□□ -1.34
LIG4-204ENST00000611712 VCX2Q9H322 139 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 SMAD5-AS1Q9Y6J3 95 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 MYO9AB2RTY4 2548 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 SIVA1O15304 175 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 EBI3Q14213 229 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 RNASE8Q8TDE3 154 aaKnown RBP6.69□□□□□ -1.34
LIG4-204ENST00000611712 FRYLO94915 3013 aa6.69□□□□□ -1.34
LIG4-204ENST00000611712 IGLC6P0CF74 106 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 C11orf71Q6IPW1 123 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 C16orf54Q6UWD8 224 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 ITLN2Q8WWU7 325 aaPredicted RBP6.68□□□□□ -1.34
LIG4-204ENST00000611712 LENEPQ9Y5L5 61 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 USP9YO00507 2555 aaPredicted RBP6.68□□□□□ -1.34
LIG4-204ENST00000611712 IGHV7-4-1A0A0J9YVY3 117 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 F8VRH5 84 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 IGKV3D-20A0A0C4DH25 116 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 IGHV3-64A0A075B6Q5 118 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 IGHV3-73A0A0B4J1V6 119 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 K7ERJ3 54 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 UNQ9165/PRO28630Q6UXU0 137 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 LINC01587Q99440 93 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 GEMIN7Q9H840 131 aaKnown RBP6.68□□□□□ -1.34
LIG4-204ENST00000611712 TP53TG1Q9Y2A0 90 aa6.68□□□□□ -1.34
LIG4-204ENST00000611712 TRAV12-2A0A075B6T6 113 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 A0A087WX48 190 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 DSCR9P59020 149 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 SPINK13Q1W4C9 94 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 ZNF876PQ49A33 203 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 C9orf47Q6ZRZ4 202 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 BOD1L2Q8IYS8 172 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 MGAQ8IWI9 3026 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 LINC01549A6NIU2 74 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 TRBV12-3P01733 135 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 TMEM95Q3KNT9 176 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 RPL39LQ96EH5 51 aaKnown RBP6.67□□□□□ -1.34
LIG4-204ENST00000611712 BEX4Q9NWD9 120 aaPredicted RBP6.67□□□□□ -1.34
LIG4-204ENST00000611712 TRBV25-1A0A075B6N4 114 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 K7EP13 123 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 Q8N6K4 173 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 ZFAND3Q9H8U3 227 aa6.67□□□□□ -1.34
LIG4-204ENST00000611712 TRGV11A0A075B6L2 103 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 A0A1W2PPM0 123 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 K7EP34 96 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 MRPS12O15235 138 aaKnown RBP6.66□□□□□ -1.34
LIG4-204ENST00000611712 GAGE13Q4V321 117 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 C20orf78Q9BR46 151 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 KLK9Q9UKQ9 250 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 NAV2Q8IVL1 2488 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 IGHV4-30-2A0A087WSY4 118 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 HLA-DRB4P13762 266 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms