RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 RPL36AP83881 106 aaKnown RBP5.65□□□□□ -1.5
CSDE1-218ENST00000610726 ERASQ7Z444 233 aa5.65□□□□□ -1.5
CSDE1-218ENST00000610726 RPL36ALQ969Q0 106 aaKnown RBP5.65□□□□□ -1.5
CSDE1-218ENST00000610726 CENPEQ02224 2701 aa5.65□□□□□ -1.5
CSDE1-218ENST00000610726 IGHV1OR15-1A0A075B7D0 117 aa5.65□□□□□ -1.5
CSDE1-218ENST00000610726 SMIM27A0A1W2PRY6 76 aa5.65□□□□□ -1.5
CSDE1-218ENST00000610726 PRSS46E5RG02 174 aa5.65□□□□□ -1.5
CSDE1-218ENST00000610726 VCYO14598 125 aa5.65□□□□□ -1.5
CSDE1-218ENST00000610726 EGR2P11161 476 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-218ENST00000610726 CHTOPQ9Y3Y2 248 aaKnown RBP5.65□□□□□ -1.5
CSDE1-218ENST00000610726 IGKV1D-37A0A075B6S9 117 aa5.65□□□□□ -1.51
CSDE1-218ENST00000610726 APOMO95445 188 aa5.65□□□□□ -1.51
CSDE1-218ENST00000610726 IGKCP01834 107 aa5.65□□□□□ -1.51
CSDE1-218ENST00000610726 FABP2P12104 132 aa5.65□□□□□ -1.51
CSDE1-218ENST00000610726 PLP1P60201 277 aa5.65□□□□□ -1.51
CSDE1-218ENST00000610726 CFHR4Q92496 578 aa5.65□□□□□ -1.51
CSDE1-218ENST00000610726 LAMTOR2Q9Y2Q5 125 aa5.65□□□□□ -1.51
CSDE1-218ENST00000610726 MRPL51Q4U2R6 128 aaKnown RBP5.65□□□□□ -1.51
CSDE1-218ENST00000610726 NDUFAF3Q9BU61 184 aa5.65□□□□□ -1.51
CSDE1-218ENST00000610726 ATG2AQ2TAZ0 1938 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 PRAC2D3DTV9 90 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 GNRH2O43555 120 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 Q0VG73 95 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 UNQ9165/PRO28630Q6UXU0 137 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 IGHV4OR15-8A0A075B7B6 117 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 A0A087WW49 117 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 H3BRM9 83 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 SYS1-DBNDD2H3BUS1 97 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 ALKBH7Q9BT30 221 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-218ENST00000610726 COL4A2P08572 1712 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 A0A1W2PPR1 153 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 COX6CP09669 75 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 LOXL1Q08397 574 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-218ENST00000610726 SFTA2Q6UW10 78 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 NEGR1Q7Z3B1 354 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 APRG1Q8IVJ8 170 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 C1orf159Q96HA4 380 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 CFAP54Q96N23 3096 aa5.64□□□□□ -1.51
CSDE1-218ENST00000610726 A0A087WX48 190 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 A6NDX4 124 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 LINC00469Q8N7U9 141 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 OR13C6PQ8NH95 151 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 PRADC1Q9BSG0 188 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 TSSC4Q9Y5U2 329 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-218ENST00000610726 ADARB2-AS1A8MUL3 147 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 TNFRSF13BO14836 293 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-218ENST00000610726 ZC2HC1BQ5TFG8 222 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 ANKRD17O75179 2603 aaKnown RBP5.63□□□□□ -1.51
CSDE1-218ENST00000610726 WI2-2373I1.2A0A1W2PRP0 233 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 FSTL3O95633 263 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 ZNF503Q96F45 646 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 ATP6V0BQ99437 205 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 EXPH5Q8NEV8 1989 aa5.63□□□□□ -1.51
CSDE1-218ENST00000610726 GAGE12BA1L429 117 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 ZNF815PA8K554 130 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 GAGE7O76087 117 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 NPYP01303 97 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 GAGE12FP0CL80 117 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 GAGE12GP0CL81 117 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 GAGE12IP0CL82 117 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 OR9G4Q8NGQ1 327 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 SMIM13P0DJ93 91 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 C16orf54Q6UWD8 224 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 SDHAF1A6NFY7 115 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 ZNF664Q8N3J9 261 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 NHP2Q9NX24 153 aaKnown RBP5.62□□□□□ -1.51
CSDE1-218ENST00000610726 MSRB1Q9NZV6 116 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 HECTD1Q9ULT8 2610 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 GAGE12JA6NER3 117 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 LY6LH3BQJ8 138 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 GAGE1Q13065 139 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 GAGE4Q13068 117 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 GAGE5Q13069 117 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 GAGE13Q4V321 117 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 STPG4Q8N801 248 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 WIPF2Q8TF74 440 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-218ENST00000610726 CCDC140Q96MF4 163 aa5.62□□□□□ -1.51
CSDE1-218ENST00000610726 MRPL16Q9NX20 251 aaKnown RBP5.62□□□□□ -1.51
CSDE1-218ENST00000610726 TRAV13-1A0A0B4J241 112 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 IGHV4-31P0DP07 118 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 IGHV3-38A0A0C4DH36 116 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 C2orf66Q6UXQ4 117 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 SIGLEC8Q9NYZ4 499 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 DSCAML1Q8TD84 2053 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 MGAQ8IWI9 3026 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 FRMD6-AS1P0C7T7 363 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 GATA1P15976 413 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-218ENST00000610726 AZU1P20160 251 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 FOXI2Q6ZQN5 318 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 DPH3Q96FX2 82 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 MEGF9Q9H1U4 602 aa5.61□□□□□ -1.51
CSDE1-218ENST00000610726 C2orf70A6NJV1 201 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 CRYGBP07316 175 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 IGLC2P0DOY2 106 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 TEX43Q6ZNM6 134 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 Q6ZWC4 215 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 TRPT1Q86TN4 253 aaKnown RBP5.6□□□□□ -1.51
CSDE1-218ENST00000610726 TP53TG1Q9Y2A0 90 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 TRAV2A0A0B4J234 112 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 RNASE1P07998 156 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms