RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 CST9LQ9H4G1 147 aa11.16□□□□□ -0.62
PCDHB16-201ENST00000609684 VPREB3Q9UKI3 123 aa11.16□□□□□ -0.62
PCDHB16-201ENST00000609684 PCNX3Q9H6A9 2034 aa11.16□□□□□ -0.62
PCDHB16-201ENST00000609684 ZNRF2Q8NHG8 242 aa11.16□□□□□ -0.62
PCDHB16-201ENST00000609684 OTOGLQ3ZCN5 2332 aa11.16□□□□□ -0.62
PCDHB16-201ENST00000609684 IGKV1OR2-108A0A075B7D4 117 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 IGLV1-47P01700 117 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 GAGE7O76087 117 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 IGLV2-23P01705 113 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 CTSGP08311 255 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 GAGE12FP0CL80 117 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 GAGE12GP0CL81 117 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 GAGE12IP0CL82 117 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 C2orf82Q6UX34 121 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 LEPROTO15243 131 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 FAM167A-AS1Q96KT0 104 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 NCKAP5O14513 1909 aa11.15□□□□□ -0.62
PCDHB16-201ENST00000609684 GNRH2O43555 120 aa11.15□□□□□ -0.63
PCDHB16-201ENST00000609684 SS18Q15532 418 aa11.15□□□□□ -0.63
PCDHB16-201ENST00000609684 CDPF1Q6NVV7 123 aa11.15□□□□□ -0.63
PCDHB16-201ENST00000609684 COL4A4P53420 1690 aaPredicted RBP11.15□□□□□ -0.63
PCDHB16-201ENST00000609684 E7EUB6 86 aa11.14□□□□□ -0.63
PCDHB16-201ENST00000609684 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
PCDHB16-201ENST00000609684 HOXD3P31249 432 aaPredicted RBP11.14□□□□□ -0.63
PCDHB16-201ENST00000609684 BLCAPP62952 87 aa11.14□□□□□ -0.63
PCDHB16-201ENST00000609684 MAJINQ3KP22 176 aa11.14□□□□□ -0.63
PCDHB16-201ENST00000609684 DEFB121Q5J5C9 76 aa11.14□□□□□ -0.63
PCDHB16-201ENST00000609684 F8VRH5 84 aa11.14□□□□□ -0.63
PCDHB16-201ENST00000609684 J3QKU1 62 aa11.14□□□□□ -0.63
PCDHB16-201ENST00000609684 Q6ZPA2 131 aa11.14□□□□□ -0.63
PCDHB16-201ENST00000609684 Q71RC1 249 aaPredicted RBP11.14□□□□□ -0.63
PCDHB16-201ENST00000609684 MRPL53Q96EL3 112 aaKnown RBP11.14□□□□□ -0.63
PCDHB16-201ENST00000609684 RBAKDNA6NC62 111 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 SPRY2O43597 315 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 HLA-DRB4P13762 266 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 COA6Q5JTJ3 125 aaKnown RBP11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 Q8N9W7 124 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 HLA-DRB4X5D2U9 266 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 TRBV25-1A0A075B6N4 114 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 KLF5Q13887 457 aaPredicted RBP11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 MRPL36Q9P0J6 103 aaKnown RBP11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 DKK2Q9UBU2 259 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 C11orf1Q9H5F2 150 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 TRAV8-3A0A0A6YYJ7 113 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 TEX22C9J3V5 150 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 Q8NA96 180 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 ZNF747Q9BV97 191 aa11.13□□□□□ -0.63
PCDHB16-201ENST00000609684 Q8N7P7 452 aa11.12□□□□□ -0.63
PCDHB16-201ENST00000609684 C3orf56Q8N813 242 aa11.12□□□□□ -0.63
PCDHB16-201ENST00000609684 IGF2BP2-AS1Q96M15 143 aa11.12□□□□□ -0.63
PCDHB16-201ENST00000609684 LENEPQ9Y5L5 61 aa11.12□□□□□ -0.63
PCDHB16-201ENST00000609684 CRIP3Q6Q6R5 217 aa11.12□□□□□ -0.63
PCDHB16-201ENST00000609684 ADAMTSL5Q6ZMM2 481 aa11.12□□□□□ -0.63
PCDHB16-201ENST00000609684 C9JAW5 83 aa11.12□□□□□ -0.63
PCDHB16-201ENST00000609684 FOXI2Q6ZQN5 318 aa11.12□□□□□ -0.63
PCDHB16-201ENST00000609684 LGALS1P09382 135 aaKnown RBP11.11□□□□□ -0.63
PCDHB16-201ENST00000609684 GATA1P15976 413 aaPredicted RBP11.11□□□□□ -0.63
PCDHB16-201ENST00000609684 ZFP36P26651 326 aaKnown RBP11.11□□□□□ -0.63
PCDHB16-201ENST00000609684 VWC2LB2RUY7 222 aa11.11□□□□□ -0.63
PCDHB16-201ENST00000609684 F5H768 121 aa11.11□□□□□ -0.63
PCDHB16-201ENST00000609684 NUPR1O60356 82 aa11.11□□□□□ -0.63
PCDHB16-201ENST00000609684 AJUBAQ96IF1 538 aa11.11□□□□□ -0.63
PCDHB16-201ENST00000609684 DAD1P61803 113 aa11.11□□□□□ -0.63
PCDHB16-201ENST00000609684 BUB3O43684 328 aa11.1□□□□□ -0.63
PCDHB16-201ENST00000609684 PRB1P04280 392 aa11.1□□□□□ -0.63
PCDHB16-201ENST00000609684 ANAPC13Q9BS18 74 aa11.1□□□□□ -0.63
PCDHB16-201ENST00000609684 C10orf105Q8TEF2 133 aa11.1□□□□□ -0.63
PCDHB16-201ENST00000609684 INS-IGF2F8WCM5 200 aa11.1□□□□□ -0.63
PCDHB16-201ENST00000609684 TMEM243Q9BU79 118 aa11.1□□□□□ -0.63
PCDHB16-201ENST00000609684 MED12LQ86YW9 2145 aa11.1□□□□□ -0.63
PCDHB16-201ENST00000609684 PROP1O75360 226 aa11.1□□□□□ -0.63
PCDHB16-201ENST00000609684 UBE2DNLQ8IWF7 75 aa11.1□□□□□ -0.63
PCDHB16-201ENST00000609684 NRGNQ92686 78 aa11.1□□□□□ -0.63
PCDHB16-201ENST00000609684 C9orf118A6NHY6 69 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 LURAP1LQ8IV03 231 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 ARHGAP21Q5T5U3 1957 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 BVES-AS1Q5T3Y7 98 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 MSRB1Q9NZV6 116 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 GAGE2BQ13066 116 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 GAGE6Q13070 117 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 GAGE2EQ4V326 116 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 C5orf56Q8N8D9 126 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 PRO3102Q9H379 93 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 GAGE2DQ9UEU5 116 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 NDUFA12Q9UI09 145 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 ATRXP46100 2492 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 P0C879 139 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 ZNF493Q6ZR52 646 aa11.09□□□□□ -0.63
PCDHB16-201ENST00000609684 CRYGCP07315 174 aa11.08□□□□□ -0.64
PCDHB16-201ENST00000609684 RNASE13Q5GAN3 156 aaKnown RBP11.08□□□□□ -0.64
PCDHB16-201ENST00000609684 GTSF1LQ9H1H1 148 aa11.08□□□□□ -0.64
PCDHB16-201ENST00000609684 SRSF2Q01130 221 aaKnown RBP11.08□□□□□ -0.64
PCDHB16-201ENST00000609684 NPSP0C0P6 89 aa11.07□□□□□ -0.64
PCDHB16-201ENST00000609684 PFN2P35080 140 aa11.07□□□□□ -0.64
PCDHB16-201ENST00000609684 FBXL19-AS1Q494R0 122 aa11.07□□□□□ -0.64
PCDHB16-201ENST00000609684 UTF1Q5T230 341 aa11.07□□□□□ -0.64
PCDHB16-201ENST00000609684 LAMTOR3Q9UHA4 124 aa11.07□□□□□ -0.64
PCDHB16-201ENST00000609684 WI2-2373I1.2A0A1W2PRP0 233 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms