RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 ACOT6Q3I5F7 207 aaPredicted RBP11.48□□□□□ -0.57
CHMP4A-211ENST00000609024 PHYHIPLQ96FC7 376 aa11.48□□□□□ -0.57
CHMP4A-211ENST00000609024 GTSF1LQ9H1H1 148 aa11.48□□□□□ -0.57
CHMP4A-211ENST00000609024 SDF2L1Q9HCN8 221 aa11.48□□□□□ -0.57
CHMP4A-211ENST00000609024 COX11Q9Y6N1 276 aa11.48□□□□□ -0.57
CHMP4A-211ENST00000609024 CCDC160A6NGH7 325 aa11.47□□□□□ -0.57
CHMP4A-211ENST00000609024 RS1O15537 224 aa11.47□□□□□ -0.57
CHMP4A-211ENST00000609024 CIDEAO60543 219 aa11.47□□□□□ -0.57
CHMP4A-211ENST00000609024 WFDC2Q14508 124 aa11.47□□□□□ -0.57
CHMP4A-211ENST00000609024 TMEM252Q8N6L7 170 aa11.47□□□□□ -0.57
CHMP4A-211ENST00000609024 SLC25A29Q8N8R3 303 aa11.47□□□□□ -0.57
CHMP4A-211ENST00000609024 ATP6V0E2Q8NHE4 81 aa11.47□□□□□ -0.57
CHMP4A-211ENST00000609024 RMI2Q96E14 147 aa11.47□□□□□ -0.57
CHMP4A-211ENST00000609024 KCNIP2Q9NS61 270 aa11.47□□□□□ -0.57
CHMP4A-211ENST00000609024 DNAH8Q96JB1 4490 aa11.47□□□□□ -0.57
CHMP4A-211ENST00000609024 TRAV21A0A0B4J279 112 aa11.46□□□□□ -0.57
CHMP4A-211ENST00000609024 GGTLC3B5MD39 225 aa11.46□□□□□ -0.57
CHMP4A-211ENST00000609024 LINC01620Q4KN68 170 aa11.46□□□□□ -0.57
CHMP4A-211ENST00000609024 CMTM2Q8TAZ6 248 aa11.46□□□□□ -0.57
CHMP4A-211ENST00000609024 BAALCQ8WXS3 180 aa11.46□□□□□ -0.57
CHMP4A-211ENST00000609024 FXYD5Q96DB9 178 aa11.46□□□□□ -0.57
CHMP4A-211ENST00000609024 KCNS1Q96KK3 526 aa11.46□□□□□ -0.57
CHMP4A-211ENST00000609024 FAM167A-AS1Q96KT0 104 aa11.46□□□□□ -0.57
CHMP4A-211ENST00000609024 C2orf50Q96LR7 162 aa11.46□□□□□ -0.57
CHMP4A-211ENST00000609024 CHAC1Q9BUX1 264 aa11.46□□□□□ -0.57
CHMP4A-211ENST00000609024 IGHV3-73A0A0B4J1V6 119 aa11.45□□□□□ -0.58
CHMP4A-211ENST00000609024 TRBV6-4A0A1B0GX49 114 aa11.45□□□□□ -0.58
CHMP4A-211ENST00000609024 IGSF23A1L1A6 192 aa11.45□□□□□ -0.58
CHMP4A-211ENST00000609024 Q8N976 141 aa11.45□□□□□ -0.58
CHMP4A-211ENST00000609024 HYLS1Q96M11 299 aa11.45□□□□□ -0.58
CHMP4A-211ENST00000609024 RPH3ALQ9UNE2 315 aa11.45□□□□□ -0.58
CHMP4A-211ENST00000609024 DIRC3C9JPN6 131 aa11.44□□□□□ -0.58
CHMP4A-211ENST00000609024 TYMSP04818 313 aa11.44□□□□□ -0.58
CHMP4A-211ENST00000609024 UBE2L3P68036 154 aaKnown RBP11.44□□□□□ -0.58
CHMP4A-211ENST00000609024 ZNF876PQ49A33 203 aa11.44□□□□□ -0.58
CHMP4A-211ENST00000609024 FAM74A1Q5RGS3 127 aa11.44□□□□□ -0.58
CHMP4A-211ENST00000609024 THAP6Q8TBB0 222 aa11.44□□□□□ -0.58
CHMP4A-211ENST00000609024 ASB13Q8WXK3 278 aa11.44□□□□□ -0.58
CHMP4A-211ENST00000609024 NMES1Q9C002 83 aa11.44□□□□□ -0.58
CHMP4A-211ENST00000609024 URGCP-MRPS24S4R325 110 aa11.44□□□□□ -0.58
CHMP4A-211ENST00000609024 TMED6Q8WW62 240 aa11.43□□□□□ -0.58
CHMP4A-211ENST00000609024 C17orf112F2Z3M2 114 aa11.42□□□□□ -0.58
CHMP4A-211ENST00000609024 SEC11BP0C7V7 166 aa11.42□□□□□ -0.58
CHMP4A-211ENST00000609024 MGST1P10620 155 aaKnown RBP11.42□□□□□ -0.58
CHMP4A-211ENST00000609024 C11orf1Q9H5F2 150 aa11.42□□□□□ -0.58
CHMP4A-211ENST00000609024 RAB32Q13637 225 aa11.41□□□□□ -0.58
CHMP4A-211ENST00000609024 CFAP126Q5VTH2 177 aa11.41□□□□□ -0.58
CHMP4A-211ENST00000609024 OR5C1Q8NGR4 320 aa11.41□□□□□ -0.58
CHMP4A-211ENST00000609024 CIRBP-AS1Q8TBR5 109 aa11.41□□□□□ -0.58
CHMP4A-211ENST00000609024 TREM1Q9NP99 234 aa11.41□□□□□ -0.58
CHMP4A-211ENST00000609024 IGKV2D-24A0A075B6R9 120 aa11.4□□□□□ -0.58
CHMP4A-211ENST00000609024 TRAV8-1A0A0A6YYK1 113 aa11.4□□□□□ -0.58
CHMP4A-211ENST00000609024 F6UZH7 168 aa11.4□□□□□ -0.58
CHMP4A-211ENST00000609024 IGLV2-8P01709 118 aa11.4□□□□□ -0.58
CHMP4A-211ENST00000609024 BTCP35070 178 aa11.4□□□□□ -0.58
CHMP4A-211ENST00000609024 TAS2R45P59539 299 aa11.4□□□□□ -0.58
CHMP4A-211ENST00000609024 KHDC3LQ587J8 217 aa11.4□□□□□ -0.58
CHMP4A-211ENST00000609024 DAZ4Q86SG3 579 aaKnown RBP11.4□□□□□ -0.58
CHMP4A-211ENST00000609024 DAZ3Q9NR90 486 aaKnown RBP11.4□□□□□ -0.58
CHMP4A-211ENST00000609024 TRAV6A0A075B6T7 132 aa11.39□□□□□ -0.59
CHMP4A-211ENST00000609024 RPL37AP61513 92 aaKnown RBP11.39□□□□□ -0.59
CHMP4A-211ENST00000609024 Q8N3U1 123 aa11.39□□□□□ -0.59
CHMP4A-211ENST00000609024 NDFIP1Q9BT67 221 aa11.39□□□□□ -0.59
CHMP4A-211ENST00000609024 LRP1Q07954 4544 aaKnown RBP11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 A0A087WWC5 75 aa11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 PGPA6NDG6 321 aa11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 GAGE12JA6NER3 117 aa11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 NHLH2Q02577 135 aa11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 GAGE1Q13065 139 aa11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 GAGE4Q13068 117 aa11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 GAGE5Q13069 117 aa11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 GAGE13Q4V321 117 aa11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 KCNIP4Q6PIL6 250 aa11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 GOLT1AQ6ZVE7 132 aa11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 OTORQ9NRC9 128 aa11.38□□□□□ -0.59
CHMP4A-211ENST00000609024 KRTAP10-4P60372 401 aaPredicted RBP11.37□□□□□ -0.59
CHMP4A-211ENST00000609024 SEC22CQ9BRL7 303 aa11.37□□□□□ -0.59
CHMP4A-211ENST00000609024 RNF222A6NCQ9 220 aa11.36□□□□□ -0.59
CHMP4A-211ENST00000609024 WDR61Q9GZS3 305 aaKnown RBP11.36□□□□□ -0.59
CHMP4A-211ENST00000609024 MBD2Q9UBB5 411 aa11.36□□□□□ -0.59
CHMP4A-211ENST00000609024 TCRBP04435 133 aa11.35□□□□□ -0.59
CHMP4A-211ENST00000609024 IL7P13232 177 aa11.35□□□□□ -0.59
CHMP4A-211ENST00000609024 C14orf177Q52M58 125 aa11.35□□□□□ -0.59
CHMP4A-211ENST00000609024 NUDT15Q9NV35 164 aa11.35□□□□□ -0.59
CHMP4A-211ENST00000609024 TAAR5O14804 337 aa11.34□□□□□ -0.59
CHMP4A-211ENST00000609024 IGLV2-11P01706 119 aa11.34□□□□□ -0.59
CHMP4A-211ENST00000609024 FGF8P55075 233 aaPredicted RBP11.34□□□□□ -0.59
CHMP4A-211ENST00000609024 ELOBQ15370 118 aa11.34□□□□□ -0.59
CHMP4A-211ENST00000609024 ZNF506Q5JVG8 444 aa11.34□□□□□ -0.59
CHMP4A-211ENST00000609024 FFAR4Q5NUL3 377 aa11.34□□□□□ -0.59
CHMP4A-211ENST00000609024 DPPA3Q6W0C5 159 aa11.34□□□□□ -0.59
CHMP4A-211ENST00000609024 CYB561D1Q8N8Q1 229 aa11.34□□□□□ -0.59
CHMP4A-211ENST00000609024 A0A087WX48 190 aa11.33□□□□□ -0.6
CHMP4A-211ENST00000609024 PGPEP1LA6NFU8 196 aa11.33□□□□□ -0.6
CHMP4A-211ENST00000609024 LYRM1O43325 122 aa11.33□□□□□ -0.6
CHMP4A-211ENST00000609024 ZFP69Q49AA0 526 aa11.33□□□□□ -0.6
CHMP4A-211ENST00000609024 UBE2WQ96B02 151 aa11.33□□□□□ -0.6
CHMP4A-211ENST00000609024 KLK12Q9UKR0 248 aa11.33□□□□□ -0.6
CHMP4A-211ENST00000609024 FAT3Q8TDW7 4589 aa11.32□□□□□ -0.6
CHMP4A-211ENST00000609024 A8MWV9 139 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms