RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 IFNA1P01562 189 aa8.64□□□□□ -1.03
LINC00963-212ENST00000608669 NMBP08949 121 aa8.64□□□□□ -1.03
LINC00963-212ENST00000608669 BLOC1S1P78537 153 aa8.64□□□□□ -1.03
LINC00963-212ENST00000608669 RPL19P84098 196 aaKnown RBP8.64□□□□□ -1.03
LINC00963-212ENST00000608669 CENPWQ5EE01 88 aa8.64□□□□□ -1.03
LINC00963-212ENST00000608669 MED9Q9NWA0 146 aa8.64□□□□□ -1.03
LINC00963-212ENST00000608669 TRAV10A0A0B4J240 114 aa8.63□□□□□ -1.03
LINC00963-212ENST00000608669 IGKV3D-20A0A0C4DH25 116 aa8.63□□□□□ -1.03
LINC00963-212ENST00000608669 IGHV3-16A0A0C4DH30 117 aa8.63□□□□□ -1.03
LINC00963-212ENST00000608669 NUPR2A6NF83 97 aa8.63□□□□□ -1.03
LINC00963-212ENST00000608669 PFN1P07737 140 aaKnown RBP8.63□□□□□ -1.03
LINC00963-212ENST00000608669 TCL1AP56279 114 aa8.63□□□□□ -1.03
LINC00963-212ENST00000608669 ZNF415Q09FC8 603 aa8.63□□□□□ -1.03
LINC00963-212ENST00000608669 ZNF674Q2M3X9 581 aa8.63□□□□□ -1.03
LINC00963-212ENST00000608669 ZNF493Q6ZR52 646 aa8.63□□□□□ -1.03
LINC00963-212ENST00000608669 VAX2Q9UIW0 290 aa8.63□□□□□ -1.03
LINC00963-212ENST00000608669 PLECQ15149 4684 aaKnown RBP8.63□□□□□ -1.03
LINC00963-212ENST00000608669 TRBV20OR9-2A0A075B6H5 130 aa8.62□□□□□ -1.03
LINC00963-212ENST00000608669 IGHV4-4A0A075B6R2 117 aa8.62□□□□□ -1.03
LINC00963-212ENST00000608669 RBFOX3A6NFN3 312 aa8.62□□□□□ -1.03
LINC00963-212ENST00000608669 LYRM9A8MSI8 78 aa8.62□□□□□ -1.03
LINC00963-212ENST00000608669 F5H768 121 aa8.62□□□□□ -1.03
LINC00963-212ENST00000608669 ORM1P02763 201 aa8.62□□□□□ -1.03
LINC00963-212ENST00000608669 SFTA3P0C7M3 94 aa8.62□□□□□ -1.03
LINC00963-212ENST00000608669 MGST1P10620 155 aaKnown RBP8.62□□□□□ -1.03
LINC00963-212ENST00000608669 SRSF3P84103 164 aaKnown RBP8.62□□□□□ -1.03
LINC00963-212ENST00000608669 SAPCD1Q5SSQ6 148 aa8.62□□□□□ -1.03
LINC00963-212ENST00000608669 BAGE2Q86Y30 109 aa8.62□□□□□ -1.03
LINC00963-212ENST00000608669 C11orf52Q96A22 123 aa8.62□□□□□ -1.03
LINC00963-212ENST00000608669 SDF2L1Q9HCN8 221 aa8.62□□□□□ -1.03
LINC00963-212ENST00000608669 A0A0J9YY99 117 aa8.61□□□□□ -1.03
LINC00963-212ENST00000608669 H3BVH4 76 aa8.61□□□□□ -1.03
LINC00963-212ENST00000608669 IGLV2-8P01709 118 aa8.61□□□□□ -1.03
LINC00963-212ENST00000608669 HOXA5P20719 270 aa8.61□□□□□ -1.03
LINC00963-212ENST00000608669 OR5I1Q13606 314 aa8.61□□□□□ -1.03
LINC00963-212ENST00000608669 TMEM88Q6PEY1 159 aa8.61□□□□□ -1.03
LINC00963-212ENST00000608669 LYPD6BQ8NI32 183 aa8.61□□□□□ -1.03
LINC00963-212ENST00000608669 LINC00467Q9BRT7 94 aa8.61□□□□□ -1.03
LINC00963-212ENST00000608669 EIF5A2Q9GZV4 153 aaKnown RBP8.61□□□□□ -1.03
LINC00963-212ENST00000608669 ALMS1Q8TCU4 4167 aa8.61□□□□□ -1.03
LINC00963-212ENST00000608669 TRGV11A0A075B6L2 103 aa8.6□□□□□ -1.03
LINC00963-212ENST00000608669 TRGV2A0A075B6R0 118 aa8.6□□□□□ -1.03
LINC00963-212ENST00000608669 MUC21A0A0G2JKD1 596 aa8.6□□□□□ -1.03
LINC00963-212ENST00000608669 MUC21A0A140T8X8 626 aa8.6□□□□□ -1.03
LINC00963-212ENST00000608669 B4DEV8 164 aa8.6□□□□□ -1.03
LINC00963-212ENST00000608669 C9JCJ5 164 aa8.6□□□□□ -1.03
LINC00963-212ENST00000608669 SSTP61278 116 aa8.6□□□□□ -1.03
LINC00963-212ENST00000608669 ZNF506Q5JVG8 444 aa8.6□□□□□ -1.03
LINC00963-212ENST00000608669 TCEAL7Q9BRU2 100 aa8.6□□□□□ -1.03
LINC00963-212ENST00000608669 LYSTQ99698 3801 aa8.6□□□□□ -1.03
LINC00963-212ENST00000608669 KMT2CQ8NEZ4 4911 aaKnown RBP8.59□□□□□ -1.03
LINC00963-212ENST00000608669 TRBV6-1A0A0K0K1D8 114 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 FABP5P3A8MUU1 101 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 C9JQL5 133 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 PDE6DO43924 150 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 SPINK4O60575 86 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 GZMBP10144 247 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 RNASE3P12724 160 aaKnown RBP8.59□□□□□ -1.03
LINC00963-212ENST00000608669 GNG4P50150 75 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 IFITM2Q01629 132 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 TDRG1Q3Y452 100 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 IBA57Q5T440 356 aaKnown RBP8.59□□□□□ -1.03
LINC00963-212ENST00000608669 FAM162BQ5T6X4 162 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 LINC00612Q8N6U2 182 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 FAM210AQ96ND0 272 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 PARLQ9H300 379 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 ZFP30Q9Y2G7 519 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 KLK5Q9Y337 293 aaPredicted RBP8.59□□□□□ -1.03
LINC00963-212ENST00000608669 MUC4Q99102 2169 aa8.59□□□□□ -1.03
LINC00963-212ENST00000608669 IGHV3-73A0A0B4J1V6 119 aa8.58□□□□□ -1.04
LINC00963-212ENST00000608669 TEX48A0A1B0GUV7 120 aa8.58□□□□□ -1.04
LINC00963-212ENST00000608669 FBLL1A6NHQ2 334 aaKnown RBP8.58□□□□□ -1.04
LINC00963-212ENST00000608669 KRBOX1C9JBD0 128 aa8.58□□□□□ -1.04
LINC00963-212ENST00000608669 LY6G6CO95867 125 aa8.58□□□□□ -1.04
LINC00963-212ENST00000608669 ATP5G1P05496 136 aa8.58□□□□□ -1.04
LINC00963-212ENST00000608669 DAZ2Q13117 558 aaKnown RBP8.58□□□□□ -1.04
LINC00963-212ENST00000608669 ZNF575Q86XF7 245 aa8.58□□□□□ -1.04
LINC00963-212ENST00000608669 MLST8Q9BVC4 326 aa8.58□□□□□ -1.04
LINC00963-212ENST00000608669 APLNQ9ULZ1 77 aa8.58□□□□□ -1.04
LINC00963-212ENST00000608669 NACAE9PAV3 2078 aa8.57□□□□□ -1.04
LINC00963-212ENST00000608669 K7EN84 100 aa8.57□□□□□ -1.04
LINC00963-212ENST00000608669 SRP19P09132 144 aaKnown RBP8.57□□□□□ -1.04
LINC00963-212ENST00000608669 ASIPP42127 132 aa8.57□□□□□ -1.04
LINC00963-212ENST00000608669 POM121L12Q8N7R1 296 aa8.57□□□□□ -1.04
LINC00963-212ENST00000608669 ZNF479Q96JC4 524 aa8.57□□□□□ -1.04
LINC00963-212ENST00000608669 KCNS1Q96KK3 526 aa8.57□□□□□ -1.04
LINC00963-212ENST00000608669 C9orf85Q96MD7 179 aa8.57□□□□□ -1.04
LINC00963-212ENST00000608669 JPT2Q9H910 190 aa8.57□□□□□ -1.04
LINC00963-212ENST00000608669 TRAV26-1A0A087WT03 109 aa8.56□□□□□ -1.04
LINC00963-212ENST00000608669 NUDT3O95989 172 aa8.56□□□□□ -1.04
LINC00963-212ENST00000608669 S100A4P26447 101 aaKnown RBP8.56□□□□□ -1.04
LINC00963-212ENST00000608669 LINC00476Q8WZB0 136 aa8.56□□□□□ -1.04
LINC00963-212ENST00000608669 SACSQ9NZJ4 4579 aa8.55□□□□□ -1.04
LINC00963-212ENST00000608669 A0A096LPF7 62 aa8.55□□□□□ -1.04
LINC00963-212ENST00000608669 LCE6AA0A183 80 aa8.55□□□□□ -1.04
LINC00963-212ENST00000608669 M0R2P5 195 aa8.55□□□□□ -1.04
LINC00963-212ENST00000608669 S100A9P06702 114 aaKnown RBP8.55□□□□□ -1.04
LINC00963-212ENST00000608669 ARMS2P0C7Q2 107 aa8.55□□□□□ -1.04
LINC00963-212ENST00000608669 LINC01559Q495D7 138 aa8.55□□□□□ -1.04
LINC00963-212ENST00000608669 COX8CQ7Z4L0 72 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms