RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 FAM74A1Q5RGS3 127 aa9.02□□□□□ -0.97
POLR2J3-219ENST00000608621 Q5VSD8 79 aa9.02□□□□□ -0.97
POLR2J3-219ENST00000608621 GOLT1AQ6ZVE7 132 aa9.02□□□□□ -0.97
POLR2J3-219ENST00000608621 FRZBQ92765 325 aa9.02□□□□□ -0.97
POLR2J3-219ENST00000608621 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
POLR2J3-219ENST00000608621 TRAV21A0A0B4J279 112 aa9.01□□□□□ -0.97
POLR2J3-219ENST00000608621 UPK1BO75841 260 aa9.01□□□□□ -0.97
POLR2J3-219ENST00000608621 SMR3BP02814 79 aaPredicted RBP9.01□□□□□ -0.97
POLR2J3-219ENST00000608621 TYMSP04818 313 aa9.01□□□□□ -0.97
POLR2J3-219ENST00000608621 RPL12P30050 165 aaKnown RBP9.01□□□□□ -0.97
POLR2J3-219ENST00000608621 C10orf126Q8N4M7 172 aa9.01□□□□□ -0.97
POLR2J3-219ENST00000608621 NHLRC2Q8NBF2 726 aa9.01□□□□□ -0.97
POLR2J3-219ENST00000608621 TREM1Q9NP99 234 aa9.01□□□□□ -0.97
POLR2J3-219ENST00000608621 TRAV8-1A0A0A6YYK1 113 aa9□□□□□ -0.97
POLR2J3-219ENST00000608621 A0A1W2PPV4 95 aa9□□□□□ -0.97
POLR2J3-219ENST00000608621 F6UZH7 168 aa9□□□□□ -0.97
POLR2J3-219ENST00000608621 GATA1P15976 413 aaPredicted RBP9□□□□□ -0.97
POLR2J3-219ENST00000608621 ACOT6Q3I5F7 207 aaPredicted RBP9□□□□□ -0.97
POLR2J3-219ENST00000608621 SH2D6Q7Z4S9 175 aa9□□□□□ -0.97
POLR2J3-219ENST00000608621 ARL6IP6Q8N6S5 226 aa9□□□□□ -0.97
POLR2J3-219ENST00000608621 KCNS1Q96KK3 526 aa9□□□□□ -0.97
POLR2J3-219ENST00000608621 WFDC1Q9HC57 220 aa9□□□□□ -0.97
POLR2J3-219ENST00000608621 SDF2L1Q9HCN8 221 aa9□□□□□ -0.97
POLR2J3-219ENST00000608621 IGHV3-38A0A0C4DH36 116 aa8.99□□□□□ -0.97
POLR2J3-219ENST00000608621 PSCAO43653 123 aa8.99□□□□□ -0.97
POLR2J3-219ENST00000608621 SSNA1O43805 119 aa8.99□□□□□ -0.97
POLR2J3-219ENST00000608621 TIRAPP58753 221 aa8.99□□□□□ -0.97
POLR2J3-219ENST00000608621 GNG5P63218 68 aa8.99□□□□□ -0.97
POLR2J3-219ENST00000608621 PQLC2Q6ZP29 291 aa8.99□□□□□ -0.97
POLR2J3-219ENST00000608621 SGK494Q96LW2 274 aa8.99□□□□□ -0.97
POLR2J3-219ENST00000608621 MARVELD1Q9BSK0 173 aa8.99□□□□□ -0.97
POLR2J3-219ENST00000608621 HERC1Q15751 4861 aa8.99□□□□□ -0.97
POLR2J3-219ENST00000608621 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
POLR2J3-219ENST00000608621 FBLL1A6NHQ2 334 aaKnown RBP8.98□□□□□ -0.97
POLR2J3-219ENST00000608621 HMGB3O15347 200 aaKnown RBP8.98□□□□□ -0.97
POLR2J3-219ENST00000608621 PET100P0DJ07 73 aa8.98□□□□□ -0.97
POLR2J3-219ENST00000608621 PPT1P50897 306 aa8.98□□□□□ -0.97
POLR2J3-219ENST00000608621 RAB2AP61019 212 aa8.98□□□□□ -0.97
POLR2J3-219ENST00000608621 SLC25A29Q8N8R3 303 aa8.98□□□□□ -0.97
POLR2J3-219ENST00000608621 ASB13Q8WXK3 278 aa8.98□□□□□ -0.97
POLR2J3-219ENST00000608621 VPS13BQ7Z7G8 4022 aa8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 IGLV5-52A0A0A0MRZ9 124 aa8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 TRAV8-6A0A0B4J262 113 aa8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 IBA57-AS1B1ANH7 110 aa8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 PFN1P07737 140 aaKnown RBP8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 HAMPP81172 84 aa8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 ZNF876PQ49A33 203 aa8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 LINC01556Q5JQF7 62 aa8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 DPPA3Q6W0C5 159 aa8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 OR10G9Q8NGN4 311 aa8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 OR10G7Q8NGN6 311 aa8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 C11orf21Q9P2W6 132 aa8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 DMBT1Q9UGM3 2413 aaPredicted RBP8.97□□□□□ -0.97
POLR2J3-219ENST00000608621 IGHV3-73A0A0B4J1V6 119 aa8.96□□□□□ -0.98
POLR2J3-219ENST00000608621 RS1O15537 224 aa8.96□□□□□ -0.98
POLR2J3-219ENST00000608621 ZNF80P51504 273 aaPredicted RBP8.96□□□□□ -0.98
POLR2J3-219ENST00000608621 OR10J3Q5JRS4 329 aa8.96□□□□□ -0.98
POLR2J3-219ENST00000608621 CFAP126Q5VTH2 177 aa8.96□□□□□ -0.98
POLR2J3-219ENST00000608621 PRADC1Q9BSG0 188 aa8.96□□□□□ -0.98
POLR2J3-219ENST00000608621 Q9HAA7 133 aa8.96□□□□□ -0.98
POLR2J3-219ENST00000608621 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
POLR2J3-219ENST00000608621 TRBV6-4A0A1B0GX49 114 aa8.95□□□□□ -0.98
POLR2J3-219ENST00000608621 FAM229AH3BQW9 127 aa8.95□□□□□ -0.98
POLR2J3-219ENST00000608621 CIDEAO60543 219 aa8.95□□□□□ -0.98
POLR2J3-219ENST00000608621 IGHV3-30P01768 117 aa8.95□□□□□ -0.98
POLR2J3-219ENST00000608621 IGHV3-33P01772 117 aa8.95□□□□□ -0.98
POLR2J3-219ENST00000608621 ARL14EPLP0DKL9 152 aa8.95□□□□□ -0.98
POLR2J3-219ENST00000608621 IGHV3-30-3P0DP02 117 aa8.95□□□□□ -0.98
POLR2J3-219ENST00000608621 IGHV3-30-5P0DP03 117 aa8.95□□□□□ -0.98
POLR2J3-219ENST00000608621 NTN5Q8WTR8 489 aaPredicted RBP8.95□□□□□ -0.98
POLR2J3-219ENST00000608621 NDFIP1Q9BT67 221 aa8.95□□□□□ -0.98
POLR2J3-219ENST00000608621 FLG2Q5D862 2391 aaPredicted RBP8.94□□□□□ -0.98
POLR2J3-219ENST00000608621 PGPEP1LA6NFU8 196 aa8.94□□□□□ -0.98
POLR2J3-219ENST00000608621 TAAR5O14804 337 aa8.94□□□□□ -0.98
POLR2J3-219ENST00000608621 GCGP01275 180 aa8.94□□□□□ -0.98
POLR2J3-219ENST00000608621 RHOHQ15669 191 aa8.94□□□□□ -0.98
POLR2J3-219ENST00000608621 TMEM70Q9BUB7 260 aa8.94□□□□□ -0.98
POLR2J3-219ENST00000608621 PSG8Q9UQ74 426 aa8.94□□□□□ -0.98
POLR2J3-219ENST00000608621 BOLA1Q9Y3E2 137 aa8.94□□□□□ -0.98
POLR2J3-219ENST00000608621 SERTM2A0A1B0GWG4 89 aa8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 TCRAP04437 139 aa8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 STAG3L2P0CL84 134 aa8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 STAG3L3P0CL85 134 aa8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 CDC34P49427 236 aaPredicted RBP8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 SUMO1P63165 101 aaKnown RBP8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 LELP1Q5T871 98 aa8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 Q8N814 137 aa8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 TMEM75Q8N9X5 138 aa8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 C5orf17Q8NAS9 161 aa8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 ATP6V0E2Q8NHE4 81 aa8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 C9orf85Q96MD7 179 aa8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 GTSF1LQ9H1H1 148 aa8.93□□□□□ -0.98
POLR2J3-219ENST00000608621 K7EQM0 130 aa8.92□□□□□ -0.98
POLR2J3-219ENST00000608621 GCHFRP30047 84 aa8.92□□□□□ -0.98
POLR2J3-219ENST00000608621 DEFA1P59665 94 aa8.92□□□□□ -0.98
POLR2J3-219ENST00000608621 DEFA3P59666 94 aa8.92□□□□□ -0.98
POLR2J3-219ENST00000608621 FLI1Q01543 452 aaPredicted RBP8.92□□□□□ -0.98
POLR2J3-219ENST00000608621 ZNF506Q5JVG8 444 aa8.92□□□□□ -0.98
POLR2J3-219ENST00000608621 PRNTQ86SH4 94 aa8.92□□□□□ -0.98
POLR2J3-219ENST00000608621 HSD17B11Q8NBQ5 300 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms