RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 A0A0J9YY99 117 aa9.72□□□□□ -0.85
CTCFL-218ENST00000608440 UQCRQO14949 82 aa9.72□□□□□ -0.85
CTCFL-218ENST00000608440 GAGE2AQ6NT46 116 aa9.72□□□□□ -0.85
CTCFL-218ENST00000608440 Q8TAT8 98 aa9.72□□□□□ -0.85
CTCFL-218ENST00000608440 CITED2Q99967 270 aaPredicted RBP9.72□□□□□ -0.85
CTCFL-218ENST00000608440 TRBV19A0A075B6N1 114 aa9.72□□□□□ -0.85
CTCFL-218ENST00000608440 A0A1B0GX51 115 aa9.72□□□□□ -0.85
CTCFL-218ENST00000608440 RPL13AP40429 203 aaKnown RBP9.72□□□□□ -0.85
CTCFL-218ENST00000608440 C17orf58Q2M2W7 97 aa9.72□□□□□ -0.85
CTCFL-218ENST00000608440 C2orf82Q6UX34 121 aa9.72□□□□□ -0.85
CTCFL-218ENST00000608440 POM121L12Q8N7R1 296 aa9.72□□□□□ -0.85
CTCFL-218ENST00000608440 SCGB3A1Q96QR1 104 aa9.72□□□□□ -0.85
CTCFL-218ENST00000608440 CEP295Q9C0D2 2601 aa9.72□□□□□ -0.85
CTCFL-218ENST00000608440 TRBV6-1A0A0K0K1D8 114 aa9.71□□□□□ -0.85
CTCFL-218ENST00000608440 IQCF6A8MYZ5 107 aa9.71□□□□□ -0.85
CTCFL-218ENST00000608440 IGHV3-30P01768 117 aa9.71□□□□□ -0.85
CTCFL-218ENST00000608440 IGHV3-30-5P0DP03 117 aa9.71□□□□□ -0.85
CTCFL-218ENST00000608440 ZNF80P51504 273 aaPredicted RBP9.71□□□□□ -0.85
CTCFL-218ENST00000608440 ATXN8Q156A1 80 aa9.71□□□□□ -0.85
CTCFL-218ENST00000608440 SIGLEC15Q6ZMC9 328 aa9.71□□□□□ -0.85
CTCFL-218ENST00000608440 KIR2DL5BQ8NHK3 375 aa9.71□□□□□ -0.85
CTCFL-218ENST00000608440 IGKV2-40A0A087WW87 121 aaPredicted RBP9.71□□□□□ -0.86
CTCFL-218ENST00000608440 IGKV2D-40P01614 121 aaPredicted RBP9.71□□□□□ -0.86
CTCFL-218ENST00000608440 COX6B1P14854 86 aa9.71□□□□□ -0.86
CTCFL-218ENST00000608440 TMEM219Q86XT9 240 aa9.71□□□□□ -0.86
CTCFL-218ENST00000608440 CXXC4Q9H2H0 198 aa9.71□□□□□ -0.86
CTCFL-218ENST00000608440 IGKV3D-15A0A087WSY6 115 aa9.7□□□□□ -0.86
CTCFL-218ENST00000608440 TRAV41A0A0B4J266 112 aa9.7□□□□□ -0.86
CTCFL-218ENST00000608440 TRBV7-7A0A0K0K1E9 115 aa9.7□□□□□ -0.86
CTCFL-218ENST00000608440 TIMM8AO60220 97 aaPredicted RBP9.7□□□□□ -0.86
CTCFL-218ENST00000608440 LINC00526Q96FQ7 95 aa9.7□□□□□ -0.86
CTCFL-218ENST00000608440 DNAJC13O75165 2243 aa9.7□□□□□ -0.86
CTCFL-218ENST00000608440 TRGV3P03979 118 aa9.7□□□□□ -0.86
CTCFL-218ENST00000608440 DUX4L9Q6RFH8 374 aaPredicted RBP9.7□□□□□ -0.86
CTCFL-218ENST00000608440 IGFBPL1Q8WX77 278 aa9.7□□□□□ -0.86
CTCFL-218ENST00000608440 DUX5Q96PT3 197 aa9.7□□□□□ -0.86
CTCFL-218ENST00000608440 SPENQ96T58 3664 aaKnown RBP9.7□□□□□ -0.86
CTCFL-218ENST00000608440 TRBV10-2A0A0K0K1G8 114 aa9.69□□□□□ -0.86
CTCFL-218ENST00000608440 IGHV3-33P01772 117 aa9.69□□□□□ -0.86
CTCFL-218ENST00000608440 CCL11P51671 97 aa9.69□□□□□ -0.86
CTCFL-218ENST00000608440 SRSF2Q01130 221 aaKnown RBP9.69□□□□□ -0.86
CTCFL-218ENST00000608440 EBI3Q14213 229 aa9.69□□□□□ -0.86
CTCFL-218ENST00000608440 FAM201AQ5SY85 155 aa9.69□□□□□ -0.86
CTCFL-218ENST00000608440 EIF4EBP3O60516 100 aaPredicted RBP9.69□□□□□ -0.86
CTCFL-218ENST00000608440 TMEM170BQ5T4T1 132 aa9.69□□□□□ -0.86
CTCFL-218ENST00000608440 IL17RELQ6ZVW7 336 aa9.69□□□□□ -0.86
CTCFL-218ENST00000608440 TPSG1Q9NRR2 321 aa9.69□□□□□ -0.86
CTCFL-218ENST00000608440 TRAV12-1A0A0B4J245 112 aa9.69□□□□□ -0.86
CTCFL-218ENST00000608440 hADV29S1A0JD25 119 aa9.69□□□□□ -0.86
CTCFL-218ENST00000608440 TTTY12Q9BZ98 90 aa9.69□□□□□ -0.86
CTCFL-218ENST00000608440 ZNF256Q9Y2P7 627 aaPredicted RBP9.69□□□□□ -0.86
CTCFL-218ENST00000608440 APC2O95996 2303 aa9.68□□□□□ -0.86
CTCFL-218ENST00000608440 DEFB109BQ30KR1 87 aa9.68□□□□□ -0.86
CTCFL-218ENST00000608440 C14orf178Q8N769 122 aaPredicted RBP9.68□□□□□ -0.86
CTCFL-218ENST00000608440 MDS2Q8NDY4 140 aa9.68□□□□□ -0.86
CTCFL-218ENST00000608440 FDCSPQ8NFU4 85 aa9.68□□□□□ -0.86
CTCFL-218ENST00000608440 TEX36Q5VZQ5 186 aa9.68□□□□□ -0.86
CTCFL-218ENST00000608440 NEXN-AS1Q8NBZ9 246 aa9.68□□□□□ -0.86
CTCFL-218ENST00000608440 PIMREGQ9BSJ6 248 aa9.68□□□□□ -0.86
CTCFL-218ENST00000608440 CYSTM1Q9H1C7 97 aa9.68□□□□□ -0.86
CTCFL-218ENST00000608440 MGAQ8IWI9 3026 aa9.68□□□□□ -0.86
CTCFL-218ENST00000608440 DSPP15924 2871 aaKnown RBP9.67□□□□□ -0.86
CTCFL-218ENST00000608440 ZNF575Q86XF7 245 aa9.67□□□□□ -0.86
CTCFL-218ENST00000608440 TMEM14CQ9P0S9 112 aa9.67□□□□□ -0.86
CTCFL-218ENST00000608440 EEF1AKMT3Q96AZ1 226 aa9.67□□□□□ -0.86
CTCFL-218ENST00000608440 MBD3L4A6NDZ8 208 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-218ENST00000608440 MBD3L3A6NE82 208 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-218ENST00000608440 MBD3L5A6NJ08 208 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-218ENST00000608440 TNFAIP6P98066 277 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-218ENST00000608440 IGFL4Q6B9Z1 124 aa9.66□□□□□ -0.86
CTCFL-218ENST00000608440 DEFB104AQ8WTQ1 72 aa9.66□□□□□ -0.86
CTCFL-218ENST00000608440 DSCR8Q96T75 97 aa9.66□□□□□ -0.86
CTCFL-218ENST00000608440 SCNM1Q9BWG6 230 aa9.66□□□□□ -0.86
CTCFL-218ENST00000608440 OXTP01178 125 aa9.66□□□□□ -0.86
CTCFL-218ENST00000608440 RPS28P62857 69 aaKnown RBP9.66□□□□□ -0.86
CTCFL-218ENST00000608440 H7C423 109 aa9.65□□□□□ -0.86
CTCFL-218ENST00000608440 SPRY2O43597 315 aa9.65□□□□□ -0.86
CTCFL-218ENST00000608440 CGB3P0DN86 165 aa9.65□□□□□ -0.86
CTCFL-218ENST00000608440 CGB7P0DN87 165 aa9.65□□□□□ -0.86
CTCFL-218ENST00000608440 TSPEAR-AS2P59090 65 aa9.65□□□□□ -0.86
CTCFL-218ENST00000608440 NRACQ8N912 160 aa9.65□□□□□ -0.86
CTCFL-218ENST00000608440 SLC25A29Q8N8R3 303 aa9.65□□□□□ -0.86
CTCFL-218ENST00000608440 DEFB108BQ8NET1 73 aa9.65□□□□□ -0.86
CTCFL-218ENST00000608440 TMEM263Q8WUH6 116 aaKnown RBP9.65□□□□□ -0.86
CTCFL-218ENST00000608440 ACACAQ13085 2346 aa9.65□□□□□ -0.87
CTCFL-218ENST00000608440 P0DMU3 169 aa9.64□□□□□ -0.87
CTCFL-218ENST00000608440 FAM231AP0DMU4 169 aa9.64□□□□□ -0.87
CTCFL-218ENST00000608440 FAM231CP0DMU5 169 aa9.64□□□□□ -0.87
CTCFL-218ENST00000608440 LINC00477Q96M19 166 aa9.64□□□□□ -0.87
CTCFL-218ENST00000608440 OVOL1O14753 267 aa9.64□□□□□ -0.87
CTCFL-218ENST00000608440 TRIAP1O43715 76 aa9.64□□□□□ -0.87
CTCFL-218ENST00000608440 LYZL6O75951 148 aa9.64□□□□□ -0.87
CTCFL-218ENST00000608440 COX7CP15954 63 aa9.64□□□□□ -0.87
CTCFL-218ENST00000608440 PLGLAQ15195 96 aa9.64□□□□□ -0.87
CTCFL-218ENST00000608440 CACNA1GO43497 2377 aa9.64□□□□□ -0.87
CTCFL-218ENST00000608440 TRAV17A0A0B4J275 112 aa9.63□□□□□ -0.87
CTCFL-218ENST00000608440 C11orf86A6NJI1 115 aa9.63□□□□□ -0.87
CTCFL-218ENST00000608440 TMEM167AQ8TBQ9 72 aa9.63□□□□□ -0.87
CTCFL-218ENST00000608440 DPH3Q96FX2 82 aa9.63□□□□□ -0.87
CTCFL-218ENST00000608440 DEFB127Q9H1M4 99 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms