RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 EIF5AP63241 154 aaKnown RBP10.11□□□□□ -0.79
SSBP4-214ENST00000607020 MRPL23Q16540 153 aaKnown RBP10.11□□□□□ -0.79
SSBP4-214ENST00000607020 ANXA2RQ3ZCQ2 193 aa10.11□□□□□ -0.79
SSBP4-214ENST00000607020 GSN-AS1Q9NRJ2 163 aa10.11□□□□□ -0.79
SSBP4-214ENST00000607020 PRO0255Q9UI72 69 aa10.11□□□□□ -0.79
SSBP4-214ENST00000607020 CTXND1A0A1B0GTU2 59 aa10.1□□□□□ -0.79
SSBP4-214ENST00000607020 NPIPB6E9PJ23 425 aa10.1□□□□□ -0.79
SSBP4-214ENST00000607020 SPINK4O60575 86 aa10.1□□□□□ -0.79
SSBP4-214ENST00000607020 TPT1P13693 172 aaKnown RBP10.1□□□□□ -0.79
SSBP4-214ENST00000607020 HAMPP81172 84 aa10.1□□□□□ -0.79
SSBP4-214ENST00000607020 ZNF726P1Q15940 193 aa10.1□□□□□ -0.79
SSBP4-214ENST00000607020 STOML3Q8TAV4 291 aa10.1□□□□□ -0.79
SSBP4-214ENST00000607020 IGLV5-52A0A0A0MRZ9 124 aa10.09□□□□□ -0.79
SSBP4-214ENST00000607020 TRGV1A0A0A0MS02 117 aa10.09□□□□□ -0.79
SSBP4-214ENST00000607020 CXorf1O96002 111 aa10.09□□□□□ -0.79
SSBP4-214ENST00000607020 GCHFRP30047 84 aa10.09□□□□□ -0.79
SSBP4-214ENST00000607020 CRYBA4P53673 196 aa10.09□□□□□ -0.79
SSBP4-214ENST00000607020 ZFP69Q49AA0 526 aa10.09□□□□□ -0.79
SSBP4-214ENST00000607020 NEGR1Q7Z3B1 354 aa10.09□□□□□ -0.79
SSBP4-214ENST00000607020 SUN5Q8TC36 379 aa10.09□□□□□ -0.79
SSBP4-214ENST00000607020 OTORQ9NRC9 128 aa10.09□□□□□ -0.79
SSBP4-214ENST00000607020 LRCOL1A6NCL2 159 aa10.08□□□□□ -0.8
SSBP4-214ENST00000607020 UMAD1C9J7I0 102 aa10.08□□□□□ -0.8
SSBP4-214ENST00000607020 PLA2G1BP04054 148 aaKnown RBP10.08□□□□□ -0.8
SSBP4-214ENST00000607020 SLC25A5P05141 298 aaKnown RBP10.08□□□□□ -0.8
SSBP4-214ENST00000607020 EVI2AP22794 236 aa10.08□□□□□ -0.8
SSBP4-214ENST00000607020 CSN1S1P47710 185 aa10.08□□□□□ -0.8
SSBP4-214ENST00000607020 TCL1AP56279 114 aa10.08□□□□□ -0.8
SSBP4-214ENST00000607020 C9orf62Q8N4C0 152 aa10.08□□□□□ -0.8
SSBP4-214ENST00000607020 SYT8Q8NBV8 401 aa10.08□□□□□ -0.8
SSBP4-214ENST00000607020 DEFB104AQ8WTQ1 72 aa10.08□□□□□ -0.8
SSBP4-214ENST00000607020 TMEM167BQ9NRX6 74 aa10.08□□□□□ -0.8
SSBP4-214ENST00000607020 HHLA3Q9XRX5 114 aa10.08□□□□□ -0.8
SSBP4-214ENST00000607020 IGKV2-40A0A087WW87 121 aaPredicted RBP10.07□□□□□ -0.8
SSBP4-214ENST00000607020 IGKV2D-40P01614 121 aaPredicted RBP10.07□□□□□ -0.8
SSBP4-214ENST00000607020 FHITP49789 147 aa10.07□□□□□ -0.8
SSBP4-214ENST00000607020 IBA57Q5T440 356 aaKnown RBP10.07□□□□□ -0.8
SSBP4-214ENST00000607020 EIF4E3Q8N5X7 224 aaKnown RBP10.07□□□□□ -0.8
SSBP4-214ENST00000607020 TMED6Q8WW62 240 aa10.07□□□□□ -0.8
SSBP4-214ENST00000607020 VGLL1Q99990 258 aa10.07□□□□□ -0.8
SSBP4-214ENST00000607020 FAM30AQ9NZY2 134 aa10.07□□□□□ -0.8
SSBP4-214ENST00000607020 KLF12Q9Y4X4 402 aa10.07□□□□□ -0.8
SSBP4-214ENST00000607020 DNAH8Q96JB1 4490 aa10.07□□□□□ -0.8
SSBP4-214ENST00000607020 C7orf71A4D174 169 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 MAP1LC3B2A6NCE7 125 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 PGPA6NDG6 321 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 KLLNB2CW77 178 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 J3KRW8 73 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 ERCC8Q13216 396 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 FHL2Q14192 279 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 FAM74A1Q5RGS3 127 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 C9orf47Q6ZRZ4 202 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 SLC51BQ86UW2 128 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 IQCF2Q8IXL9 164 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 C10orf126Q8N4M7 172 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 MAP1LC3BQ9GZQ8 125 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 AGPAT4-IT1Q9H0P7 198 aa10.06□□□□□ -0.8
SSBP4-214ENST00000607020 TMEM78Q5T7P6 136 aa10.05□□□□□ -0.8
SSBP4-214ENST00000607020 EIF5AL1Q6IS14 154 aaKnown RBP10.05□□□□□ -0.8
SSBP4-214ENST00000607020 WFDC10BQ8IUB3 73 aa10.05□□□□□ -0.8
SSBP4-214ENST00000607020 ARL6IP6Q8N6S5 226 aa10.05□□□□□ -0.8
SSBP4-214ENST00000607020 CMTM2Q8TAZ6 248 aa10.05□□□□□ -0.8
SSBP4-214ENST00000607020 FAM213BQ8TBF2 198 aa10.05□□□□□ -0.8
SSBP4-214ENST00000607020 FAM19A4Q96LR4 140 aa10.05□□□□□ -0.8
SSBP4-214ENST00000607020 LINC00477Q96M19 166 aa10.05□□□□□ -0.8
SSBP4-214ENST00000607020 RBAKDNA6NC62 111 aa10.04□□□□□ -0.8
SSBP4-214ENST00000607020 DIRC3C9JPN6 131 aa10.04□□□□□ -0.8
SSBP4-214ENST00000607020 FGF8P55075 233 aaPredicted RBP10.04□□□□□ -0.8
SSBP4-214ENST00000607020 DPPA3Q6W0C5 159 aa10.04□□□□□ -0.8
SSBP4-214ENST00000607020 C8orf49Q96NF6 230 aa10.04□□□□□ -0.8
SSBP4-214ENST00000607020 A0A1W2PRE2 83 aa10.03□□□□□ -0.8
SSBP4-214ENST00000607020 GGTLC3B5MD39 225 aa10.03□□□□□ -0.8
SSBP4-214ENST00000607020 IGHV3-53P01767 116 aa10.03□□□□□ -0.8
SSBP4-214ENST00000607020 CRYGDP07320 174 aa10.03□□□□□ -0.8
SSBP4-214ENST00000607020 NMBP08949 121 aa10.03□□□□□ -0.8
SSBP4-214ENST00000607020 ZNF138P52744 262 aa10.03□□□□□ -0.8
SSBP4-214ENST00000607020 Q6ZSA8 131 aa10.03□□□□□ -0.8
SSBP4-214ENST00000607020 Q8N814 137 aa10.03□□□□□ -0.8
SSBP4-214ENST00000607020 C5orf17Q8NAS9 161 aa10.03□□□□□ -0.8
SSBP4-214ENST00000607020 MBD3L1Q8WWY6 194 aa10.03□□□□□ -0.8
SSBP4-214ENST00000607020 RPH3ALQ9UNE2 315 aa10.03□□□□□ -0.8
SSBP4-214ENST00000607020 K7EQD1 137 aa10.02□□□□□ -0.81
SSBP4-214ENST00000607020 CRISP2P16562 243 aa10.02□□□□□ -0.81
SSBP4-214ENST00000607020 SRIP30626 198 aa10.02□□□□□ -0.81
SSBP4-214ENST00000607020 RAB5CP51148 216 aa10.02□□□□□ -0.81
SSBP4-214ENST00000607020 NKX2-5P52952 324 aaPredicted RBP10.02□□□□□ -0.81
SSBP4-214ENST00000607020 GNG5P63218 68 aa10.02□□□□□ -0.81
SSBP4-214ENST00000607020 ZNF415Q09FC8 603 aa10.02□□□□□ -0.81
SSBP4-214ENST00000607020 GOLT1AQ6ZVE7 132 aa10.02□□□□□ -0.81
SSBP4-214ENST00000607020 Q8TAT8 98 aa10.02□□□□□ -0.81
SSBP4-214ENST00000607020 SFT2D1Q8WV19 159 aa10.02□□□□□ -0.81
SSBP4-214ENST00000607020 ZNF492Q9P255 531 aa10.02□□□□□ -0.81
SSBP4-214ENST00000607020 LRP1Q07954 4544 aaKnown RBP10.01□□□□□ -0.81
SSBP4-214ENST00000607020 TRBV7-9A0A0J9YWB2 115 aa10.01□□□□□ -0.81
SSBP4-214ENST00000607020 SERTM2A0A1B0GWG4 89 aa10.01□□□□□ -0.81
SSBP4-214ENST00000607020 OXTP01178 125 aa10.01□□□□□ -0.81
SSBP4-214ENST00000607020 ORM1P02763 201 aa10.01□□□□□ -0.81
SSBP4-214ENST00000607020 H2AFB1P0C5Y9 115 aa10.01□□□□□ -0.81
SSBP4-214ENST00000607020 UBE2G2P60604 165 aa10.01□□□□□ -0.81
SSBP4-214ENST00000607020 SUMO1P63165 101 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms