RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 OR10G9Q8NGN4 311 aa5.17□□□□□ -1.58
CUX1-219ENST00000606749 OR10G7Q8NGN6 311 aa5.17□□□□□ -1.58
CUX1-219ENST00000606749 PCNPQ8WW12 178 aaKnown RBP5.17□□□□□ -1.58
CUX1-219ENST00000606749 TREM1Q9NP99 234 aa5.17□□□□□ -1.58
CUX1-219ENST00000606749 RPH3ALQ9UNE2 315 aa5.17□□□□□ -1.58
CUX1-219ENST00000606749 LY96Q9Y6Y9 160 aa5.17□□□□□ -1.58
CUX1-219ENST00000606749 LOC100131303A0A0U1RQF7 123 aa5.16□□□□□ -1.58
CUX1-219ENST00000606749 C9JCJ5 164 aa5.16□□□□□ -1.58
CUX1-219ENST00000606749 HMGB3O15347 200 aaKnown RBP5.16□□□□□ -1.58
CUX1-219ENST00000606749 TYMSP04818 313 aa5.16□□□□□ -1.58
CUX1-219ENST00000606749 DNAH10OSP0CZ25 163 aa5.16□□□□□ -1.58
CUX1-219ENST00000606749 ERVFC1-1P60608 527 aa5.16□□□□□ -1.58
CUX1-219ENST00000606749 GNG5P63218 68 aa5.16□□□□□ -1.58
CUX1-219ENST00000606749 SGK494Q96LW2 274 aa5.16□□□□□ -1.58
CUX1-219ENST00000606749 TXNDC17Q9BRA2 123 aa5.16□□□□□ -1.58
CUX1-219ENST00000606749 SDF2L1Q9HCN8 221 aa5.16□□□□□ -1.58
CUX1-219ENST00000606749 MSRB1Q9NZV6 116 aa5.16□□□□□ -1.58
CUX1-219ENST00000606749 LRP1BQ9NZR2 4599 aa5.15□□□□□ -1.58
CUX1-219ENST00000606749 A0A087WTM6 91 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 F6UZH7 168 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 STAG3L2P0CL84 134 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 STAG3L3P0CL85 134 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 ARL14EPLP0DKL9 152 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 EVI2AP22794 236 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 XGP55808 180 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 CDPF1Q6NVV7 123 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 SH2D6Q7Z4S9 175 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 SUN5Q8TC36 379 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 ASB13Q8WXK3 278 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 KCNS1Q96KK3 526 aa5.15□□□□□ -1.59
CUX1-219ENST00000606749 ABCA13Q86UQ4 5058 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 SERTM2A0A1B0GWG4 89 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 TAAR5O14804 337 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 IGLV2-11P01706 119 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 TCRAP04437 139 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 CRYGDP07320 174 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 GATA1P15976 413 aaPredicted RBP5.14□□□□□ -1.59
CUX1-219ENST00000606749 GCHFRP30047 84 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 CDC34P49427 236 aaPredicted RBP5.14□□□□□ -1.59
CUX1-219ENST00000606749 ZNF80P51504 273 aaPredicted RBP5.14□□□□□ -1.59
CUX1-219ENST00000606749 TIRAPP58753 221 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 SUMO1P63165 101 aaKnown RBP5.14□□□□□ -1.59
CUX1-219ENST00000606749 SLC25A29Q8N8R3 303 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 OR2G3Q8NGZ4 309 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 RAB24Q969Q5 203 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 C11orf21Q9P2W6 132 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 ALG5Q9Y673 324 aa5.14□□□□□ -1.59
CUX1-219ENST00000606749 IGHV3-38A0A0C4DH36 116 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 FBLL1A6NHQ2 334 aaKnown RBP5.13□□□□□ -1.59
CUX1-219ENST00000606749 CIDEAO60543 219 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 PFN1P07737 140 aaKnown RBP5.13□□□□□ -1.59
CUX1-219ENST00000606749 ATP6V0CP27449 155 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 KRTAP10-1P60331 282 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 SERF2P84101 59 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 ZNF876PQ49A33 203 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 Q5BKY6 102 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 CFAP126Q5VTH2 177 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 DPPA3Q6W0C5 159 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 C10orf126Q8N4M7 172 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 C5orf17Q8NAS9 161 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 HSD17B11Q8NBQ5 300 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 PTH2Q96A98 100 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 AQP10Q96PS8 301 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 NDFIP1Q9BT67 221 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 PSMG3Q9BT73 122 aaPredicted RBP5.13□□□□□ -1.59
CUX1-219ENST00000606749 EPDR1Q9UM22 224 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 PSG8Q9UQ74 426 aa5.13□□□□□ -1.59
CUX1-219ENST00000606749 TRBV6-4A0A1B0GX49 114 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 PGPEP1LA6NFU8 196 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 EPM2AB3EWF7 344 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 K7EQM0 130 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 RS1O15537 224 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 CXorf1O96002 111 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 GCGP01275 180 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 MBP02144 154 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 RNASE3P12724 160 aaKnown RBP5.12□□□□□ -1.59
CUX1-219ENST00000606749 FLI1Q01543 452 aaPredicted RBP5.12□□□□□ -1.59
CUX1-219ENST00000606749 LINC01556Q5JQF7 62 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 PRNTQ86SH4 94 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 NHLRC2Q8NBF2 726 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 C9orf85Q96MD7 179 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 PRADC1Q9BSG0 188 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 ACTR3CQ9C0K3 210 aaPredicted RBP5.12□□□□□ -1.59
CUX1-219ENST00000606749 MED28Q9H204 178 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 TMEM167BQ9NRX6 74 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 TNFSF18Q9UNG2 199 aa5.12□□□□□ -1.59
CUX1-219ENST00000606749 IGHV3-73A0A0B4J1V6 119 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 TRAV8-6A0A0B4J262 113 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 LRCOL1A6NCL2 159 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 IBA57-AS1B1ANH7 110 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 GGTLC3B5MD39 225 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 GCSHP23434 173 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 PPT1P50897 306 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 RHOHQ15669 191 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 SMUG1Q53HV7 270 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 ZNF506Q5JVG8 444 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 SAPCD1Q5SSQ6 148 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 CYB561D1Q8N8Q1 229 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 TMEM75Q8N9X5 138 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 LINC00479Q96M42 142 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms