RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ZNF415Q09FC8 603 aa10.17□□□□□ -0.78
CTSA-211ENST00000606066 DAZ2Q13117 558 aaKnown RBP10.17□□□□□ -0.78
CTSA-211ENST00000606066 ZNF767PQ75MW2 155 aa10.17□□□□□ -0.78
CTSA-211ENST00000606066 COX8CQ7Z4L0 72 aa10.17□□□□□ -0.78
CTSA-211ENST00000606066 TMEM183AQ8IXX5 376 aa10.17□□□□□ -0.78
CTSA-211ENST00000606066 SDF2L1Q9HCN8 221 aa10.17□□□□□ -0.78
CTSA-211ENST00000606066 GSN-AS1Q9NRJ2 163 aa10.17□□□□□ -0.78
CTSA-211ENST00000606066 RBFOX3A6NFN3 312 aa10.16□□□□□ -0.78
CTSA-211ENST00000606066 DEFB130BP0DP73 79 aa10.16□□□□□ -0.78
CTSA-211ENST00000606066 DEFB130AP0DP74 79 aa10.16□□□□□ -0.78
CTSA-211ENST00000606066 TCL1AP56279 114 aa10.16□□□□□ -0.78
CTSA-211ENST00000606066 BAGE2Q86Y30 109 aa10.16□□□□□ -0.78
CTSA-211ENST00000606066 C11orf72Q8NBR9 251 aa10.16□□□□□ -0.78
CTSA-211ENST00000606066 MED9Q9NWA0 146 aa10.16□□□□□ -0.78
CTSA-211ENST00000606066 TP53TG3Q9ULZ0 132 aa10.16□□□□□ -0.78
CTSA-211ENST00000606066 DEFB131BA0A096LNP1 70 aa10.15□□□□□ -0.78
CTSA-211ENST00000606066 RPL35P42766 123 aaKnown RBP10.15□□□□□ -0.78
CTSA-211ENST00000606066 FAM162BQ5T6X4 162 aa10.14□□□□□ -0.79
CTSA-211ENST00000606066 ZC2HC1AQ96GY0 325 aa10.14□□□□□ -0.79
CTSA-211ENST00000606066 SPXQ9BT56 116 aa10.14□□□□□ -0.79
CTSA-211ENST00000606066 GNRH2O43555 120 aa10.13□□□□□ -0.79
CTSA-211ENST00000606066 TYMSP04818 313 aa10.13□□□□□ -0.79
CTSA-211ENST00000606066 TCTAP57738 103 aa10.13□□□□□ -0.79
CTSA-211ENST00000606066 LGALS9BQ3B8N2 356 aa10.13□□□□□ -0.79
CTSA-211ENST00000606066 ZNF506Q5JVG8 444 aa10.13□□□□□ -0.79
CTSA-211ENST00000606066 LINC00612Q8N6U2 182 aa10.13□□□□□ -0.79
CTSA-211ENST00000606066 MLST8Q9BVC4 326 aa10.13□□□□□ -0.79
CTSA-211ENST00000606066 EIF5A2Q9GZV4 153 aaKnown RBP10.13□□□□□ -0.79
CTSA-211ENST00000606066 MDFICQ9P1T7 246 aa10.13□□□□□ -0.79
CTSA-211ENST00000606066 TRGV1A0A0A0MS02 117 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 IGHV3-16A0A0C4DH30 117 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 GAGE12BA1L429 117 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 TMEM250H0YL14 139 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 SPINK4O60575 86 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 GAGE7O76087 117 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 ORM1P02763 201 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 ATP5G1P05496 136 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 GAGE12FP0CL80 117 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 GAGE12GP0CL81 117 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 GAGE12IP0CL82 117 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 HTN3P15516 51 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 GNG4P50150 75 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 CRIP1P50238 77 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 ZNF674Q2M3X9 581 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 NHLRC2Q8NBF2 726 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 SMIM12Q96EX1 92 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 FAM210AQ96ND0 272 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 DERL1Q9BUN8 251 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 ALMS1Q8TCU4 4167 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 HERC2O95714 4834 aa10.12□□□□□ -0.79
CTSA-211ENST00000606066 TRGV2A0A075B6R0 118 aa10.11□□□□□ -0.79
CTSA-211ENST00000606066 IGLL5B9A064 214 aa10.11□□□□□ -0.79
CTSA-211ENST00000606066 SH2D1AO60880 128 aa10.11□□□□□ -0.79
CTSA-211ENST00000606066 NDUFS6O75380 124 aaKnown RBP10.11□□□□□ -0.79
CTSA-211ENST00000606066 RAB14P61106 215 aa10.11□□□□□ -0.79
CTSA-211ENST00000606066 CENPWQ5EE01 88 aa10.11□□□□□ -0.79
CTSA-211ENST00000606066 TOR2AQ5JU69 321 aa10.11□□□□□ -0.79
CTSA-211ENST00000606066 Q6ZTI0 123 aa10.11□□□□□ -0.79
CTSA-211ENST00000606066 FAM210BQ96KR6 192 aa10.11□□□□□ -0.79
CTSA-211ENST00000606066 C18orf15Q96N68 181 aa10.11□□□□□ -0.79
CTSA-211ENST00000606066 C11orf21Q9P2W6 132 aa10.11□□□□□ -0.79
CTSA-211ENST00000606066 IGKV3D-20A0A0C4DH25 116 aa10.1□□□□□ -0.79
CTSA-211ENST00000606066 B4DEV8 164 aa10.1□□□□□ -0.79
CTSA-211ENST00000606066 S100A4P26447 101 aaKnown RBP10.1□□□□□ -0.79
CTSA-211ENST00000606066 BIN3Q9NQY0 253 aa10.1□□□□□ -0.79
CTSA-211ENST00000606066 RAB19A4D1S5 217 aa10.09□□□□□ -0.79
CTSA-211ENST00000606066 F5H768 121 aa10.09□□□□□ -0.79
CTSA-211ENST00000606066 M0R2P5 195 aa10.09□□□□□ -0.79
CTSA-211ENST00000606066 ASIPP42127 132 aa10.09□□□□□ -0.79
CTSA-211ENST00000606066 LINC01559Q495D7 138 aa10.09□□□□□ -0.79
CTSA-211ENST00000606066 PRR27Q6MZM9 219 aa10.09□□□□□ -0.79
CTSA-211ENST00000606066 PCNPQ8WW12 178 aaKnown RBP10.09□□□□□ -0.79
CTSA-211ENST00000606066 RASL10AQ92737 203 aa10.09□□□□□ -0.79
CTSA-211ENST00000606066 MRPL16Q9NX20 251 aaKnown RBP10.09□□□□□ -0.79
CTSA-211ENST00000606066 IGHV4-4A0A075B6R2 117 aa10.08□□□□□ -0.8
CTSA-211ENST00000606066 KRBOX1C9JBD0 128 aa10.08□□□□□ -0.8
CTSA-211ENST00000606066 M0R036 132 aa10.08□□□□□ -0.8
CTSA-211ENST00000606066 MGST1P10620 155 aaKnown RBP10.08□□□□□ -0.8
CTSA-211ENST00000606066 OR5I1Q13606 314 aa10.08□□□□□ -0.8
CTSA-211ENST00000606066 DAZAP1Q96EP5 407 aaKnown RBP10.08□□□□□ -0.8
CTSA-211ENST00000606066 NDUFAF3Q9BU61 184 aa10.08□□□□□ -0.8
CTSA-211ENST00000606066 PARLQ9H300 379 aa10.08□□□□□ -0.8
CTSA-211ENST00000606066 C9JCJ5 164 aa10.07□□□□□ -0.8
CTSA-211ENST00000606066 CEBPGP53567 150 aa10.07□□□□□ -0.8
CTSA-211ENST00000606066 PEA15Q15121 130 aa10.07□□□□□ -0.8
CTSA-211ENST00000606066 KRTAP17-1Q9BYP8 105 aa10.07□□□□□ -0.8
CTSA-211ENST00000606066 SMDT1Q9H4I9 107 aa10.07□□□□□ -0.8
CTSA-211ENST00000606066 IGLV2-8P01709 118 aa10.06□□□□□ -0.8
CTSA-211ENST00000606066 RNASE3P12724 160 aaKnown RBP10.06□□□□□ -0.8
CTSA-211ENST00000606066 DNLZQ5SXM8 178 aa10.06□□□□□ -0.8
CTSA-211ENST00000606066 PTH2Q96A98 100 aa10.06□□□□□ -0.8
CTSA-211ENST00000606066 C9orf85Q96MD7 179 aa10.06□□□□□ -0.8
CTSA-211ENST00000606066 IL36BQ9NZH7 164 aa10.06□□□□□ -0.8
CTSA-211ENST00000606066 FRAS1Q86XX4 4008 aa10.06□□□□□ -0.8
CTSA-211ENST00000606066 TRBV20OR9-2A0A075B6H5 130 aa10.05□□□□□ -0.8
CTSA-211ENST00000606066 TMSB15BA0A087X1C1 80 aa10.05□□□□□ -0.8
CTSA-211ENST00000606066 SRP19P09132 144 aaKnown RBP10.05□□□□□ -0.8
CTSA-211ENST00000606066 CXCL1P09341 107 aa10.05□□□□□ -0.8
CTSA-211ENST00000606066 ZNF876PQ49A33 203 aa10.05□□□□□ -0.8
CTSA-211ENST00000606066 TMEM88Q6PEY1 159 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms